RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ACSL6Q9UKU0 697 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 SRPK3Q9UPE1 567 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 TRAV25A0A0B4J276 109 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 TTC24A2A3L6 582 aaPredicted RBP7.15□□□□□ -1.27
GPNMB-201ENST00000258733 OR52A4PA6NMU1 304 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 DVL1O14640 695 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF432O94892 652 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 SYPP08247 313 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 SSTR4P31391 388 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 INPP1P49441 399 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 JAG1P78504 1218 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 MEF2DQ14814 521 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 SHHQ15465 462 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 PHYHD1Q5SRE7 291 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 TCTN3Q6NUS6 607 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF613Q6PF04 617 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 FAM180AQ6UWF9 173 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 FCRLAQ7L513 359 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 ATG4DQ86TL0 474 aaPredicted RBP7.15□□□□□ -1.27
GPNMB-201ENST00000258733 OR4F15Q8NGB8 312 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 FBLIM1Q8WUP2 373 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 EAF2Q96CJ1 260 aaPredicted RBP7.15□□□□□ -1.27
GPNMB-201ENST00000258733 SCLYQ96I15 445 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 HARBI1Q96MB7 349 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 TRMT61BQ9BVS5 477 aaKnown RBP7.15□□□□□ -1.27
GPNMB-201ENST00000258733 ACTR3CQ9C0K3 210 aaPredicted RBP7.15□□□□□ -1.27
GPNMB-201ENST00000258733 METTL17Q9H7H0 456 aaPredicted RBP7.15□□□□□ -1.27
GPNMB-201ENST00000258733 LRFN1Q9P244 771 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 FZD4Q9ULV1 537 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 FCF1Q9Y324 198 aaKnown RBP7.15□□□□□ -1.27
GPNMB-201ENST00000258733 STRAPQ9Y3F4 350 aaKnown RBP7.15□□□□□ -1.27
GPNMB-201ENST00000258733 TNS2Q63HR2 1409 aa7.15□□□□□ -1.27
GPNMB-201ENST00000258733 LOC100130705A0A1B0GUX0 176 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 ISM1B1AKI9 464 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 ACKR2O00590 384 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 CDIPTO14735 213 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 EMC8O43402 210 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 CDC40O60508 579 aaKnown RBP eCLIP7.14□□□□□ -1.27
GPNMB-201ENST00000258733 IGKV5-2P06315 115 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TDGF1P13385 188 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 COMTP21964 271 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 GABRR2P28476 465 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 IGFALSP35858 605 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TFPI2P48307 235 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 PXNP49023 591 aaPredicted RBP7.14□□□□□ -1.27
GPNMB-201ENST00000258733 F2RL1P55085 397 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 DAOAP59103 153 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 NPY5RQ15761 445 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 ARHGAP11BQ3KRB8 267 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 CCSMST1Q4G0I0 132 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 PRSS36Q5K4E3 855 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 SPATA46Q5T0L3 261 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TMEM244Q5VVB8 128 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 WBP2NLQ6ICG8 309 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TMUB2Q71RG4 321 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 GOLGA7Q7Z5G4 137 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF546Q86UE3 836 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 CBWD2Q8IUF1 395 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 CCDC71LQ8N9Z2 235 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 GPR152Q8TDT2 470 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 GPR148Q8TDV2 347 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 SLC5A5Q92911 643 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 MBOAT4Q96T53 435 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 NRSN2Q9GZP1 204 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 ARL6Q9H0F7 186 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 GEMIN7Q9H840 131 aaKnown RBP7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TUBA4BQ9H853 241 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 CHST2Q9Y4C5 530 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 URGCP-MRPS24S4R325 110 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 MTCL1Q9Y4B5 1905 aaKnown RBP7.14□□□□□ -1.27
GPNMB-201ENST00000258733 LAMB2P55268 1798 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TRBV2A0A0J9YWF9 115 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 GJE1A6NN92 205 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 F5H6K3 240 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 M0R036 132 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 SOD3P08294 240 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 F7P08709 466 aaPredicted RBP7.14□□□□□ -1.27
GPNMB-201ENST00000258733 MTHFD2P13995 350 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 KLRC2P26717 231 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 BLKP51451 505 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 ACLYP53396 1101 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 PNLIPRP1P54315 467 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 ST8SIA6P61647 398 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 CRMP1Q14194 572 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TGIF1Q15583 401 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 PDZD11Q5EBL8 140 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 LCN8Q6JVE9 175 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 GLT6D1Q7Z4J2 308 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 Q8N402 240 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 BOLLQ8N9W6 283 aaKnown RBP7.14□□□□□ -1.27
GPNMB-201ENST00000258733 ATP6V1C2Q8NEY4 427 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 OR4S2Q8NH73 311 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 KREMEN1Q96MU8 473 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 WDR92Q96MX6 357 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 MED10Q9BTT4 135 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 OR2J1Q9GZK6 312 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 SIK2Q9H0K1 926 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 DHX35Q9H5Z1 703 aaKnown RBP7.14□□□□□ -1.27
GPNMB-201ENST00000258733 POPDC2Q9HBU9 364 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 MRPL22Q9NWU5 206 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms