RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 NANOGP1Q8N7R0 232 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 OR10AC1Q8NH08 325 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 ENKURQ8TC29 256 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 SFXN5Q8TD22 340 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 RFKQ969G6 155 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 ITFG2Q969R8 447 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 CREB3L1Q96BA8 519 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 OMA1Q96E52 524 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 DERL3Q96Q80 235 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 WDR12Q9GZL7 423 aaKnown RBP8.31□□□□□ -1.08
CKAP2-201ENST00000258607 METTL7AQ9H8H3 244 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 KRCC1Q9NPI7 259 aaPredicted RBP8.31□□□□□ -1.08
CKAP2-201ENST00000258607 EXTL2Q9UBQ6 330 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 GRHPRQ9UBQ7 328 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 SUSD2Q9UGT4 822 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 WBP11Q9Y2W2 641 aaKnown RBP8.31□□□□□ -1.08
CKAP2-201ENST00000258607 MPZL2O60487 215 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 SLC16A7O60669 478 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 OR2J2O76002 312 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 RCBTB2O95199 551 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 ATP1B1P05026 303 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 KLK2P20151 261 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 CRYBB2P43320 205 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 ATP12AP54707 1039 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 NXPH1P58417 271 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 UBE2UQ5VVX9 321 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 ZNF554Q86TJ5 538 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 SAMD14Q8IZD0 417 aaPredicted RBP8.31□□□□□ -1.08
CKAP2-201ENST00000258607 OR5W2Q8NH69 310 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 TRUB1Q8WWH5 349 aaKnown RBP8.31□□□□□ -1.08
CKAP2-201ENST00000258607 VSTM2LQ96N03 204 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.31□□□□□ -1.08
CKAP2-201ENST00000258607 SEMA4CQ9C0C4 833 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 CDCP1Q9H5V8 836 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 BCL2L10Q9HD36 194 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 STUB1Q9UNE7 303 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 CFL2Q9Y281 166 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 SIGLEC7Q9Y286 467 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 PTRH2Q9Y3E5 179 aaKnown RBP8.31□□□□□ -1.08
CKAP2-201ENST00000258607 AKR7A3O95154 331 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 LIPCP11150 499 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 ZNF28P17035 718 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 SKP1P63208 163 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 CHAF1BQ13112 559 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 YOD1Q5VVQ6 348 aaPredicted RBP8.31□□□□□ -1.08
CKAP2-201ENST00000258607 VASNQ6EMK4 673 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 RASSF6Q6ZTQ3 369 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 LUZP2Q86TE4 346 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 ATCAYQ86WG3 371 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 NT5CQ8TCD5 201 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 FAM46BQ96A09 425 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 TEKT2Q9UIF3 430 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 PCOLCE2Q9UKZ9 415 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 COPS3Q9UNS2 423 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 AKAP13Q12802 2813 aa8.31□□□□□ -1.08
CKAP2-201ENST00000258607 A0A0G2JMP0 313 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 A0A0X1KG70 313 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 A0A1W2PQM1 296 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 XKRYO14609 159 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 POLR1CO15160 346 aaPredicted RBP8.3□□□□□ -1.08
CKAP2-201ENST00000258607 AKAP8O43823 692 aaKnown RBP8.3□□□□□ -1.08
CKAP2-201ENST00000258607 CCNKO75909 580 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 SCG5P05408 212 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 PRKCAP17252 672 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 RORAP35398 523 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 CDK5Q00535 292 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 SRYQ05066 204 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.3□□□□□ -1.08
CKAP2-201ENST00000258607 NKAIN1Q4KMZ8 207 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 C12orf73Q69YU5 71 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 LYSMD2Q8IV50 215 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 SLC7A5P1Q8MH63 180 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 MFSD4AQ8N468 514 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 OR4M2Q8NGB6 313 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 RHBDD1Q8TEB9 315 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 FCGR1BQ92637 280 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 SHDQ96IW2 340 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 DUSP22Q9NRW4 184 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.3□□□□□ -1.08
CKAP2-201ENST00000258607 RXFP3Q9NSD7 469 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 NUFIP1Q9UHK0 495 aaKnown RBP8.3□□□□□ -1.08
CKAP2-201ENST00000258607 HSPE1-MOB4S4R3N1 261 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 CACNA1BQ00975 2339 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 IGHV3-64DA0A0J9YX35 117 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 TRIM64CA6NLI5 447 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 ZNF264O43296 627 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 TRAPPC6AO75865 159 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 HK1P19367 917 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 ABCD3P28288 659 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 CDKN2AP42771 156 aaKnown RBP8.3□□□□□ -1.08
CKAP2-201ENST00000258607 EMP2P54851 167 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 POU3F1Q03052 451 aaPredicted RBP8.3□□□□□ -1.08
CKAP2-201ENST00000258607 ZNF117Q03924 483 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 COX10Q12887 443 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 CAMK2DQ13557 499 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 WDR45BQ5MNZ6 344 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 SFRP4Q6FHJ7 346 aaPredicted RBP8.3□□□□□ -1.08
CKAP2-201ENST00000258607 OR10K2Q6IF99 312 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 ZNF574Q6ZN55 896 aaPredicted RBP8.3□□□□□ -1.08
CKAP2-201ENST00000258607 C9orf40Q8IXQ3 194 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms