RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 OR6C6A6NF89 314 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 SERINC4A6NH21 518 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 IL2RGP31785 369 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 FAM83HQ6ZRV2 1179 aaPredicted RBP17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 RABEPKQ7Z6M1 372 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 ZNF784Q8NCA9 323 aaPredicted RBP17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 SNAPC3Q92966 411 aa17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 ZMAT3Q9HA38 289 aaKnown RBP17.35■□□□□ 0.37
SMARCC1-201ENST00000254480 IGHV3-64DA0A0J9YX35 117 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 FOXE1O00358 373 aaPredicted RBP17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 ZNF749O43361 778 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 ENSAO43768 121 aaKnown RBP17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 GALR3O60755 368 aaPredicted RBP17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 SCGB2A1O75556 95 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 MTCP1P56278 107 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 PDE7AQ13946 482 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 PARP16Q8N5Y8 322 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 ZBTB8AQ96BR9 441 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 DUSP13Q9UII6 198 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 ZNF585AQ6P3V2 769 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 MAVSQ7Z434 540 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 ESX1Q8N693 406 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 PPP1R35Q8TAP8 253 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 PSMF1Q92530 271 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 TSPAN10Q9H1Z9 355 aaPredicted RBP17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 CENPBD1B2RD01 187 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 TIMM8AO60220 97 aaPredicted RBP17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 SLC43A1O75387 559 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 OR14A16Q8NHC5 309 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 SLC41A2Q96JW4 573 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 ALG12Q9BV10 488 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 ACSS1Q9NUB1 689 aaPredicted RBP17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 TMEM100Q9NV29 134 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 PCNPQ8WW12 178 aaKnown RBP17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 METTL15A6NJ78 407 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 TCN2P20062 427 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 BCL7AQ4VC05 210 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 SFRP5Q5T4F7 317 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 OR6F1Q8NGZ6 308 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 SNX18Q96RF0 628 aa17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 CMSS1Q9BQ75 279 aaKnown RBP17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 C6orf106Q9H6K1 298 aaPredicted RBP17.34■□□□□ 0.37
SMARCC1-201ENST00000254480 TMEM11P17152 192 aa17.33■□□□□ 0.37
SMARCC1-201ENST00000254480 OMGP23515 440 aa17.33■□□□□ 0.37
SMARCC1-201ENST00000254480 IKZF1Q13422 519 aa17.33■□□□□ 0.37
SMARCC1-201ENST00000254480 BCL2A1Q16548 175 aa17.33■□□□□ 0.37
SMARCC1-201ENST00000254480 PRICKLE2Q7Z3G6 844 aa17.33■□□□□ 0.37
SMARCC1-201ENST00000254480 MUCL1Q96DR8 90 aa17.33■□□□□ 0.37
SMARCC1-201ENST00000254480 MS4A8Q9BY19 250 aa17.33■□□□□ 0.37
SMARCC1-201ENST00000254480 P2RY10O00398 339 aa17.33■□□□□ 0.37
SMARCC1-201ENST00000254480 HCRTR1O43613 425 aa17.33■□□□□ 0.37
SMARCC1-201ENST00000254480 HLA-AP01891 365 aaKnown RBP17.33■□□□□ 0.37
SMARCC1-201ENST00000254480 TPMTP51580 245 aa17.33■□□□□ 0.37
SMARCC1-201ENST00000254480 ATP1B3P54709 279 aa17.33■□□□□ 0.37
SMARCC1-201ENST00000254480 RNF32Q9H0A6 362 aa17.33■□□□□ 0.37
SMARCC1-201ENST00000254480 EMC9Q9Y3B6 208 aa17.33■□□□□ 0.37
SMARCC1-201ENST00000254480 C17orf113A0A1B0GUU1 675 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 H0YIV9 168 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 I6L893 689 aaPredicted RBP17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 MMP2P08253 660 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 NHSL2Q5HYW2 709 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 MANEAQ5SRI9 462 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 RASD2Q96D21 266 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 ZNF583Q96ND8 569 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 NIPSNAP1Q9BPW8 284 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 RPS10P5Q9NQ39 176 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 TMED7-TICAM2A0A0A6YYA0 188 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 CDHR4A6H8M9 788 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 DPP4P27487 766 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 PFN3P60673 137 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 YPEL5P62699 121 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 BPIFB2Q8N4F0 458 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 ZNF511Q8NB15 262 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 C1QTNF6Q9BXI9 259 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 PPP1R14DQ9NXH3 145 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 TMED7Q9Y3B3 224 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 ALPLP05186 524 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 TSPAN31Q12999 210 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 CYP4V2Q6ZWL3 525 aaPredicted RBP17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 BHLHE23Q8NDY6 225 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 OR5L1Q8NGL2 311 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 MRPL38Q96DV4 380 aaKnown RBP17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 AMDHD1Q96NU7 426 aa17.33■□□□□ 0.36
SMARCC1-201ENST00000254480 FBXO24O75426 580 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 GNB3P16520 340 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 SHC1P29353 583 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 TAS2R20P59543 309 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 TMEM185AQ8NFB2 350 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 ZNF281Q9Y2X9 895 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 ILKQ13418 452 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 C22orf15Q8WYQ4 148 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 TRAPPC2LQ9UL33 140 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 OPRD1P41143 372 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 ALDH3B2P48448 385 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 GPR85P60893 370 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 CRMP1Q14194 572 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 RBM45Q8IUH3 476 aaKnown RBP17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 SLC16A11Q8NCK7 471 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 UBE2FQ969M7 185 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms