RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 TRMT10AQ8TBZ6 339 aaKnown RBP9.29□□□□□ -0.92
COPB1-201ENST00000249923 THAP4Q8WY91 577 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 PELI1Q96FA3 418 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 HYLS1Q96M11 299 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 STACQ99469 402 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 ZNF559Q9BR84 538 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 LYRM4Q9HD34 91 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 FLVCR2Q9UPI3 526 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 BAIAP2Q9UQB8 552 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 KLF8O95600 359 aaPredicted RBP9.29□□□□□ -0.92
COPB1-201ENST00000249923 CSN2P05814 226 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 SNRPBP14678 240 aaKnown RBP9.29□□□□□ -0.92
COPB1-201ENST00000249923 HK1P19367 917 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 CXCL3P19876 107 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 UBE2MP61081 183 aaKnown RBP9.29□□□□□ -0.92
COPB1-201ENST00000249923 DGCR2P98153 550 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 STX4Q12846 297 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 TIGD3Q6B0B8 471 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 FBXO46Q6PJ61 603 aaPredicted RBP9.29□□□□□ -0.92
COPB1-201ENST00000249923 KIRREL2Q6UWL6 708 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 IQCF2Q8IXL9 164 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 YAF2Q8IY57 180 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 OR11H4Q8NGC9 324 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 YIPF5Q969M3 257 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 ELSPBP1Q96BH3 223 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 DDOQ99489 341 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 GHITMQ9H3K2 345 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 MEIS3P1A6NDR6 274 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 ANKRD61A6NGH8 418 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 SLC22A31A6NKX4 558 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 RDH16O75452 317 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 NKX2-2O95096 273 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 HOXC4P09017 264 aaPredicted RBP9.28□□□□□ -0.92
COPB1-201ENST00000249923 ANXA3P12429 323 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 AHCYP23526 432 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 BMP8BP34820 402 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 TNFRSF4P43489 277 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 CENPAP49450 140 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 NNATQ16517 81 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 ACSM3Q53FZ2 586 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 TMEM255AQ5JRV8 349 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 BMP8AQ7Z5Y6 402 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 BPHLQ86WA6 291 aaPredicted RBP9.28□□□□□ -0.92
COPB1-201ENST00000249923 GRAMD2AQ8IUY3 354 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 ZNF680Q8NEM1 530 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 CREB3L1Q96BA8 519 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 ELMOD3Q96FG2 381 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 WDR92Q96MX6 357 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 LMF1Q96S06 567 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 NDC1Q9BTX1 674 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 KCNN2Q9H2S1 579 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 C2orf42Q9NWW7 574 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 KCNN3Q9UGI6 736 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 SESN1Q9Y6P5 492 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 TP53BP1Q12888 1972 aaPredicted RBP9.28□□□□□ -0.92
COPB1-201ENST00000249923 C10orf142B7Z368 130 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 FZD7O75084 574 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 SIX6O95475 246 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 MT-ND5P03915 603 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 BMP7P18075 431 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 RBMS1P29558 406 aaKnown RBP9.28□□□□□ -0.92
COPB1-201ENST00000249923 PITPNBP48739 271 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 C9orf62Q8N4C0 152 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 ZNF527Q8NB42 609 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 ZSCAN1Q8NBB4 408 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 OR9A4Q8NGU2 314 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 OR4K13Q8NH42 304 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 PDCD1LG2Q9BQ51 273 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 ZFP64Q9NPA5 681 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 HAO2Q9NYQ3 351 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 MED31Q9Y3C7 131 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 RP1P56715 2156 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 FAM25EA8MYX2 175 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 PIN1P1O15428 100 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 ARPC5O15511 151 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 CDC123O75794 336 aaPredicted RBP9.28□□□□□ -0.92
COPB1-201ENST00000249923 SLC22A5O76082 557 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 RPP14O95059 124 aaKnown RBP9.28□□□□□ -0.92
COPB1-201ENST00000249923 NAA10P41227 235 aaPredicted RBP9.28□□□□□ -0.92
COPB1-201ENST00000249923 ABHD13Q7L211 337 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 PLCZ1Q86YW0 608 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 ACOT12Q8WYK0 555 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 RGP1Q92546 391 aaPredicted RBP9.28□□□□□ -0.92
COPB1-201ENST00000249923 SCMH1Q96GD3 660 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 OR14A2Q96R54 314 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 SERTAD3Q9UJW9 196 aa9.28□□□□□ -0.92
COPB1-201ENST00000249923 NPIPB9F8W1W9 429 aa9.27□□□□□ -0.93
COPB1-201ENST00000249923 IFNA7P01567 189 aa9.27□□□□□ -0.93
COPB1-201ENST00000249923 UBE2IP63279 158 aaKnown RBP9.27□□□□□ -0.93
COPB1-201ENST00000249923 SNTB2Q13425 540 aaKnown RBP9.27□□□□□ -0.93
COPB1-201ENST00000249923 C17orf107Q6ZR85 190 aa9.27□□□□□ -0.93
COPB1-201ENST00000249923 ZNF767PQ75MW2 155 aa9.27□□□□□ -0.93
COPB1-201ENST00000249923 ZNF687Q8N1G0 1237 aa9.27□□□□□ -0.93
COPB1-201ENST00000249923 SLC44A3Q8N4M1 653 aa9.27□□□□□ -0.93
COPB1-201ENST00000249923 OR52E2Q8NGJ4 325 aa9.27□□□□□ -0.93
COPB1-201ENST00000249923 RSC1A1Q92681 617 aa9.27□□□□□ -0.93
COPB1-201ENST00000249923 SLC22A18Q96BI1 424 aa9.27□□□□□ -0.93
COPB1-201ENST00000249923 SPACA7Q96KW9 195 aa9.27□□□□□ -0.93
COPB1-201ENST00000249923 VSTM2LQ96N03 204 aa9.27□□□□□ -0.93
COPB1-201ENST00000249923 DERL3Q96Q80 235 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms