RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 OR6C68A6NDL8 312 aa16.82■□□□□ 0.28
HOXC11-201ENST00000243082 FGF5P12034 268 aa16.82■□□□□ 0.28
HOXC11-201ENST00000243082 PGCP20142 388 aa16.82■□□□□ 0.28
HOXC11-201ENST00000243082 UQCRC1P31930 480 aa16.82■□□□□ 0.28
HOXC11-201ENST00000243082 TNFSF8P32971 234 aa16.82■□□□□ 0.28
HOXC11-201ENST00000243082 PSMD7P51665 324 aa16.82■□□□□ 0.28
HOXC11-201ENST00000243082 NRG3P56975 720 aa16.82■□□□□ 0.28
HOXC11-201ENST00000243082 GGTLC2Q14390 218 aa16.82■□□□□ 0.28
HOXC11-201ENST00000243082 INSL4Q14641 139 aa16.82■□□□□ 0.28
HOXC11-201ENST00000243082 PAPD4Q6PIY7 484 aaKnown RBP16.82■□□□□ 0.28
HOXC11-201ENST00000243082 FAM122BQ7Z309 247 aa16.82■□□□□ 0.28
HOXC11-201ENST00000243082 TMEM105Q8N8V8 129 aa16.82■□□□□ 0.28
HOXC11-201ENST00000243082 OR51L1Q8NGJ5 315 aa16.82■□□□□ 0.28
HOXC11-201ENST00000243082 B4GALNT2Q8NHY0 566 aa16.82■□□□□ 0.28
HOXC11-201ENST00000243082 LPAR4Q99677 370 aa16.82■□□□□ 0.28
HOXC11-201ENST00000243082 TBCCD1Q9NVR7 557 aa16.82■□□□□ 0.28
HOXC11-201ENST00000243082 PLEKHB1Q9UF11 243 aaPredicted RBP16.82■□□□□ 0.28
HOXC11-201ENST00000243082 IQCMA0A1B0GVH7 501 aa16.81■□□□□ 0.28
HOXC11-201ENST00000243082 TMEM200CA6NKL6 621 aa16.81■□□□□ 0.28
HOXC11-201ENST00000243082 D6RAR5 112 aa16.81■□□□□ 0.28
HOXC11-201ENST00000243082 E9PI62 339 aa16.81■□□□□ 0.28
HOXC11-201ENST00000243082 GABRPO00591 440 aa16.81■□□□□ 0.28
HOXC11-201ENST00000243082 RNF13O43567 381 aa16.81■□□□□ 0.28
HOXC11-201ENST00000243082 CDC40O60508 579 aaKnown RBP eCLIP16.81■□□□□ 0.28
HOXC11-201ENST00000243082 PFDN1O60925 122 aa16.81■□□□□ 0.28
HOXC11-201ENST00000243082 TFP02787 698 aa16.81■□□□□ 0.28
HOXC11-201ENST00000243082 GAAP10253 952 aa16.81■□□□□ 0.28
HOXC11-201ENST00000243082 P2RX1P51575 399 aa16.81■□□□□ 0.28
HOXC11-201ENST00000243082 HNRNPA0Q13151 305 aaKnown RBP16.81■□□□□ 0.28
HOXC11-201ENST00000243082 CBFBQ13951 182 aa16.81■□□□□ 0.28
HOXC11-201ENST00000243082 CLPPQ16740 277 aaPredicted RBP16.81■□□□□ 0.28
HOXC11-201ENST00000243082 TMEM91Q6ZNR0 172 aa16.81■□□□□ 0.28
HOXC11-201ENST00000243082 SSX6Q7RTT6 188 aa16.81■□□□□ 0.28
HOXC11-201ENST00000243082 GHDCQ8N2G8 530 aa16.81■□□□□ 0.28
HOXC11-201ENST00000243082 NUBPLQ8TB37 319 aa16.81■□□□□ 0.28
HOXC11-201ENST00000243082 THAP3Q8WTV1 239 aaPredicted RBP16.81■□□□□ 0.28
HOXC11-201ENST00000243082 Q96M85 177 aa16.81■□□□□ 0.28
HOXC11-201ENST00000243082 SLC26A1Q9H2B4 701 aa16.81■□□□□ 0.28
HOXC11-201ENST00000243082 MEN1O00255 615 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 NUDT14O95848 222 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 MT-ND5P03915 603 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 CD14P08571 375 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 CXCR1P25024 350 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 CDKN2AP42771 156 aaKnown RBP16.8■□□□□ 0.28
HOXC11-201ENST00000243082 DIO1P49895 249 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 HCCSP53701 268 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 ACTC1P68032 377 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 ACTA1P68133 377 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 TRIM16LQ309B1 348 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 ALG10Q5BKT4 473 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 GPR119Q8TDV5 335 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 DUSP19Q8WTR2 217 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 C4orf36Q96KX1 117 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 GTPBP2Q9BX10 602 aaKnown RBP16.8■□□□□ 0.28
HOXC11-201ENST00000243082 TRIM36Q9NQ86 728 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 PCNX3Q9H6A9 2034 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 TEX13CA0A0J9YWL9 993 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 C4orf47A7E2U8 309 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 TBX1O43435 398 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 GP1BBP13224 206 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 APEHP13798 732 aaKnown RBP16.8■□□□□ 0.28
HOXC11-201ENST00000243082 SPI1P17947 270 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 GALP22466 123 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 TGM1P22735 817 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 RPS5P46782 204 aaKnown RBP16.8■□□□□ 0.28
HOXC11-201ENST00000243082 DUSP3P51452 185 aaPredicted RBP16.8■□□□□ 0.28
HOXC11-201ENST00000243082 OR12D2P58182 307 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 RUNX1T1Q06455 604 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 PON3Q15166 354 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 SPANXN2Q5MJ10 180 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 C1QL3Q5VWW1 255 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 MRPL14Q6P1L8 145 aaKnown RBP16.8■□□□□ 0.28
HOXC11-201ENST00000243082 POMZP3Q6PJE2 187 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 TMEM205Q6UW68 189 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 CPEB2Q7Z5Q1 589 aaKnown RBP16.8■□□□□ 0.28
HOXC11-201ENST00000243082 BPHLQ86WA6 291 aaPredicted RBP16.8■□□□□ 0.28
HOXC11-201ENST00000243082 MARCH9Q86YJ5 346 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 LYSMD2Q8IV50 215 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 GPALPP1Q8IXQ4 340 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 RFLNBQ8N5W9 214 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 SLC30A2Q9BRI3 323 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 ABCB10Q9NRK6 738 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 ZNF229Q9UJW7 825 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 FBXO4Q9UKT5 387 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 SLC6A5Q9Y345 797 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 NOX1Q9Y5S8 564 aa16.8■□□□□ 0.28
HOXC11-201ENST00000243082 SHISA3A0PJX4 238 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 CD8B2A6NJW9 211 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 J3QLW9 94 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 CBFA2T3O75081 653 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 BGLAPP02818 100 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 CD8BP10966 210 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 ZNF19P17023 458 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 FBXW4P57775 412 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 CTXN1P60606 82 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 RPL18Q07020 188 aaKnown RBP16.79■□□□□ 0.28
HOXC11-201ENST00000243082 LGALS3BPQ08380 585 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 EFR3AQ14156 821 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 IL11RAQ14626 422 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 QPRTQ15274 297 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms