RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 FOXB2Q5VYV0 432 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 TMEM236Q5W0B7 351 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 ACSM5Q6NUN0 579 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 LYPD8Q6UX82 237 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 Q6ZPB1 254 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-201ENST00000238688 ZNF367Q7RTV3 350 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 EGFL6Q8IUX8 553 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 LRR1Q96L50 414 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 FRMD6Q96NE9 622 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 IL4I1Q96RQ9 567 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 PLA2G12AQ9BZM1 189 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 CCDC90BQ9GZT6 254 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 EGLN3Q9H6Z9 239 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 INPP5EQ9NRR6 644 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 TAS2R10Q9NYW0 307 aa11.99□□□□□ -0.49
SLIRP-201ENST00000238688 DIMT1Q9UNQ2 313 aaKnown RBP11.99□□□□□ -0.49
SLIRP-201ENST00000238688 ICE1Q9Y2F5 2266 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 TRAV36DV7A0A075B6V5 113 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 A0A087WZY1 265 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 CLEC18AA5D8T8 446 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 TRIM64BA6NI03 449 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 SLC22A31A6NKX4 558 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 RIIAD1A6NNX1 92 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 FAM47E-STBD1D6RA91 191 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 ZNF208O43345 1280 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 TLX2O43763 284 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-201ENST00000238688 PIP5K1CO60331 668 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 ENTPD6O75354 484 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 SLC25A12O75746 678 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 FADS2O95864 444 aaKnown RBP11.98□□□□□ -0.49
SLIRP-201ENST00000238688 MT-ND2P03891 347 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 TSPAN19P0C672 248 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 DBTP11182 482 aaKnown RBP11.98□□□□□ -0.49
SLIRP-201ENST00000238688 ZNF3P17036 446 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 HK1P19367 917 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 MAKP20794 623 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 ADH6P28332 368 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 EIF1P41567 113 aaKnown RBP11.98□□□□□ -0.49
SLIRP-201ENST00000238688 GAS1P54826 345 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 FOXL2P58012 376 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 ZNF91Q05481 1191 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 C1DQ13901 141 aaKnown RBP11.98□□□□□ -0.49
SLIRP-201ENST00000238688 NEDD8Q15843 81 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 SMN1Q16637 294 aaKnown RBP11.98□□□□□ -0.49
SLIRP-201ENST00000238688 ZNF791Q3KP31 576 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-201ENST00000238688 TIMM50Q3ZCQ8 353 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 H3F3CQ6NXT2 135 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 CBLN3Q6UW01 205 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 CLEC18BQ6UXF7 455 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 B3GNT6Q6ZMB0 384 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 ASB18Q6ZVZ8 466 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 PRR22Q8IZ63 422 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 CLEC18CQ8NCF0 446 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 ANKK1Q8NFD2 765 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 OR8D4Q8NGM9 314 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 PFN4Q8NHR9 129 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 GPR119Q8TDV5 335 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 FAR1Q8WVX9 515 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 MIB2Q96AX9 1013 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 TMEM80Q96HE8 168 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 MRGPRX4Q96LA9 322 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 ZNF582Q96NG8 517 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-201ENST00000238688 RASL10BQ96S79 203 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 ZBTB20Q9HC78 741 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-201ENST00000238688 FGF20Q9NP95 211 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-201ENST00000238688 C20orf141Q9NUB4 165 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 H2AFY2Q9P0M6 372 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-201ENST00000238688 ERVK-18Q9QC07 812 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 WARS2Q9UGM6 360 aaKnown RBP11.98□□□□□ -0.49
SLIRP-201ENST00000238688 ERGIC3Q9Y282 383 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 HIF3AQ9Y2N7 669 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 EXOSC1Q9Y3B2 195 aaKnown RBP11.98□□□□□ -0.49
SLIRP-201ENST00000238688 PCDHGA9Q9Y5G4 932 aaKnown RBP11.98□□□□□ -0.49
SLIRP-201ENST00000238688 WIF1Q9Y5W5 379 aa11.98□□□□□ -0.49
SLIRP-201ENST00000238688 SPIN1Q9Y657 262 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-201ENST00000238688 SPTAN1Q13813 2472 aaKnown RBP11.98□□□□□ -0.49
SLIRP-201ENST00000238688 SPTBN1Q01082 2364 aaKnown RBP11.97□□□□□ -0.49
SLIRP-201ENST00000238688 CCDC160A6NGH7 325 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 A8MVM7 634 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 PRKYO43930 277 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 PRKNO60260 465 aaPredicted RBP11.97□□□□□ -0.49
SLIRP-201ENST00000238688 FZD7O75084 574 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 OR2J2O76002 312 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 RAB36O95755 333 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 SERPINA7P05543 415 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 TACR3P29371 465 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 HTR1FP30939 366 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 MTNR1AP48039 350 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 CLK1P49759 484 aaKnown RBP11.97□□□□□ -0.49
SLIRP-201ENST00000238688 SSR4P51571 173 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 CCL11P51671 97 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 ZNF74Q16587 644 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.97□□□□□ -0.495e-7■■■■□ 21.9
SLIRP-201ENST00000238688 CNPY1Q3B7I2 92 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 AADACL4Q5VUY2 407 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 GPR139Q6DWJ6 353 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 ISLR2Q6UXK2 745 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 PPP1R32Q7Z5V6 425 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 MARCH3Q86UD3 253 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 ANKRD13BQ86YJ7 626 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms