RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 IQCHQ86VS3 1027 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 REPS2Q8NFH8 660 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 IP6K3Q96PC2 410 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 MFRPQ9BY79 579 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 ASCL3Q9NQ33 180 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 VPS29Q9UBQ0 182 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 A0A1B0GTI1 187 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 ADAM10O14672 748 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 FLRT2O43155 660 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 PRAMEF4O60810 478 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 CD14P08571 375 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 LPOP22079 712 aaPredicted RBP12.01□□□□□ -0.49
MSH2-201ENST00000233146 NSG1P42857 185 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 KIR3DL2P43630 455 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 ST8SIA6P61647 398 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 GAGE1Q13065 139 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 PIN1Q13526 163 aaPredicted RBP12.01□□□□□ -0.49
MSH2-201ENST00000233146 HNF4GQ14541 408 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 AWAT1Q58HT5 328 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 PRAMEF9Q5VWM5 478 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 ZNF385CQ66K41 422 aaPredicted RBP12.01□□□□□ -0.49
MSH2-201ENST00000233146 VRK3Q8IV63 474 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 GPR137CQ8N3F9 429 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 LINC00471Q8N535 108 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 ACBD7Q8N6N7 88 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 MORN4Q8NDC4 146 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 BBS1Q8NFJ9 593 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 OR4K1Q8NGD4 311 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 OR6N1Q8NGY5 312 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 DUSP19Q8WTR2 217 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 NOL4LQ96MY1 436 aaPredicted RBP12.01□□□□□ -0.49
MSH2-201ENST00000233146 SMIM14Q96QK8 99 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 TMEM121BQ9BXQ6 578 aaPredicted RBP12.01□□□□□ -0.49
MSH2-201ENST00000233146 DNAJB11Q9UBS4 358 aa12.01□□□□□ -0.49
MSH2-201ENST00000233146 CPED1A4D0V7 1026 aa12□□□□□ -0.49
MSH2-201ENST00000233146 FAM183AA6NL82 134 aa12□□□□□ -0.49
MSH2-201ENST00000233146 M0QZ92 97 aa12□□□□□ -0.49
MSH2-201ENST00000233146 NARSO43776 548 aaKnown RBP12□□□□□ -0.49
MSH2-201ENST00000233146 SNRNP70P08621 437 aaKnown RBP12□□□□□ -0.49
MSH2-201ENST00000233146 TPT1P13693 172 aaKnown RBP12□□□□□ -0.49
MSH2-201ENST00000233146 DGKAP23743 735 aa12□□□□□ -0.49
MSH2-201ENST00000233146 MPZP25189 248 aa12□□□□□ -0.49
MSH2-201ENST00000233146 RGS19P49795 217 aa12□□□□□ -0.49
MSH2-201ENST00000233146 TAF6P49848 677 aa12□□□□□ -0.49
MSH2-201ENST00000233146 RAE1P78406 368 aaKnown RBP12□□□□□ -0.49
MSH2-201ENST00000233146 ZXDCQ2QGD7 858 aaPredicted RBP12□□□□□ -0.49
MSH2-201ENST00000233146 MESTQ5EB52 335 aa12□□□□□ -0.49
MSH2-201ENST00000233146 PRSS58Q8IYP2 241 aa12□□□□□ -0.49
MSH2-201ENST00000233146 PAQR4Q8N4S7 273 aaPredicted RBP12□□□□□ -0.49
MSH2-201ENST00000233146 OR5R1Q8NH85 324 aa12□□□□□ -0.49
MSH2-201ENST00000233146 PIGXQ8TBF5 258 aa12□□□□□ -0.49
MSH2-201ENST00000233146 CHST6Q9GZX3 395 aa12□□□□□ -0.49
MSH2-201ENST00000233146 C1orf198Q9H425 327 aa12□□□□□ -0.49
MSH2-201ENST00000233146 KPTNQ9Y664 436 aa12□□□□□ -0.49
MSH2-201ENST00000233146 DOCK4Q8N1I0 1966 aa12□□□□□ -0.49
MSH2-201ENST00000233146 ANTXRLA6NF34 631 aa12□□□□□ -0.49
MSH2-201ENST00000233146 ZNF726A6NNF4 738 aa12□□□□□ -0.49
MSH2-201ENST00000233146 ACOT7O00154 380 aa12□□□□□ -0.49
MSH2-201ENST00000233146 LRG1P02750 347 aa12□□□□□ -0.49
MSH2-201ENST00000233146 PTHLHP12272 177 aa12□□□□□ -0.49
MSH2-201ENST00000233146 CD200P41217 278 aa12□□□□□ -0.49
MSH2-201ENST00000233146 PRKXP51817 358 aa12□□□□□ -0.49
MSH2-201ENST00000233146 PTSQ03393 145 aa12□□□□□ -0.49
MSH2-201ENST00000233146 ZNF234Q14588 700 aa12□□□□□ -0.49
MSH2-201ENST00000233146 RPS26P11Q5JNZ5 115 aaPredicted RBP12□□□□□ -0.49
MSH2-201ENST00000233146 UBXN11Q5T124 520 aa12□□□□□ -0.49
MSH2-201ENST00000233146 PLBD1Q6P4A8 553 aa12□□□□□ -0.49
MSH2-201ENST00000233146 METTL7BQ6UX53 244 aa12□□□□□ -0.49
MSH2-201ENST00000233146 PLPPR4Q7Z2D5 763 aa12□□□□□ -0.49
MSH2-201ENST00000233146 CDK20Q8IZL9 346 aa12□□□□□ -0.49
MSH2-201ENST00000233146 APCDD1Q8J025 514 aa12□□□□□ -0.49
MSH2-201ENST00000233146 C17orf47Q8NEP4 570 aa12□□□□□ -0.49
MSH2-201ENST00000233146 LKAAEAR1Q8TD35 194 aa12□□□□□ -0.49
MSH2-201ENST00000233146 PGLYRP3Q96LB9 341 aa12□□□□□ -0.49
MSH2-201ENST00000233146 HRH4Q9H3N8 390 aa12□□□□□ -0.49
MSH2-201ENST00000233146 CERS4Q9HA82 394 aa12□□□□□ -0.49
MSH2-201ENST00000233146 APMAPQ9HDC9 416 aa12□□□□□ -0.49
MSH2-201ENST00000233146 LPAR3Q9UBY5 353 aa12□□□□□ -0.49
MSH2-201ENST00000233146 SCN8AQ9UQD0 1980 aa12□□□□□ -0.49
MSH2-201ENST00000233146 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.99□□□□□ -0.49
MSH2-201ENST00000233146 OR52A4PA6NMU1 304 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 GPR39O43194 453 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 IL3P08700 152 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 RPS2P15880 293 aaKnown RBP11.99□□□□□ -0.49
MSH2-201ENST00000233146 BMP7P18075 431 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 GNALP38405 381 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 MAP3K8P41279 467 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 NAAAQ02083 359 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 ACSM2AQ08AH3 577 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 ZNF177Q13360 481 aaPredicted RBP11.99□□□□□ -0.49
MSH2-201ENST00000233146 TAF13Q15543 124 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 HMGN3Q15651 99 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 TMEM31Q5JXX7 168 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 ADGRF1Q5T601 910 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 ACSM2BQ68CK6 577 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 DNM1P46Q6ZS02 220 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 NDUFAF7Q7L592 441 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 BAP18Q8IXM2 172 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 OR5M8Q8NGP6 311 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 AMDHD1Q96NU7 426 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms