RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 FHL1Q13642 323 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 CBFBQ13951 182 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 ZNF619Q8N2I2 560 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 OR2L13Q8N349 312 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 OR5M1Q8NGP8 315 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 C1orf216Q8TAB5 229 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 SYNPRQ8TBG9 265 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 LRRC3BQ96PB8 259 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 CNN2Q99439 309 aaKnown RBP12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 SLC25A18Q9H1K4 315 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 PRSS16Q9NQE7 514 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 PCDHB16Q9NRJ7 776 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 OR5V1Q9UGF6 321 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 SNRNP200O75643 2136 aaKnown RBP12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 DBIP07108 87 aaKnown RBP12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 PTHLHP12272 177 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 LAMP2P13473 410 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 MAPK3P27361 379 aaPredicted RBP12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 RPS15P62841 145 aaKnown RBP12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 DHCR24Q15392 516 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 C2orf68Q2NKX9 166 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 SNX33Q8WV41 574 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 NSMAFQ92636 917 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 INSM2Q96T92 566 aaPredicted RBP12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 MRI1Q9BV20 369 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 KCNE5Q9UJ90 142 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 GNG8Q9UK08 70 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 LDOC1O95751 146 aaPredicted RBP12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 RHOP08100 348 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 CDK2P24941 298 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 CLDN12P56749 244 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 CDK3Q00526 305 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 SHEQ5VZ18 495 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 SLC35F2Q8IXU6 374 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 LRRC25Q8N386 305 aaPredicted RBP12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 CLRN3Q8NCR9 226 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 OR2L8Q8NGY9 312 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 TNFRSF13CQ96RJ3 184 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 SLC38A3Q99624 504 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 MCCC2Q9HCC0 563 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 KLF2Q9Y5W3 355 aaPredicted RBP12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 V9GY05 133 aa12.86□□□□□ -0.35
SCNN1A-201ENST00000228916 MYO7AQ13402 2215 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 FXYD6-FXYD2A0A087WZ82 144 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 UBE2QL1A1L167 161 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 ACOD1A6NK06 481 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 HIDE1A8MVS5 230 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 ADH1AP07327 375 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 CALCBP10092 127 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 SLC6A6P31641 620 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 OR7E24Q6IFN5 339 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 SFTPA1Q8IWL2 248 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 ZNF433Q8N7K0 673 aaPredicted RBP12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 OR6K3Q8NGY3 331 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 NPAS1Q99742 590 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 GINS4Q9BRT9 223 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 FXYD6Q9H0Q3 95 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 EVA1AQ9H8M9 152 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 C2orf42Q9NWW7 574 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 NCDNQ9UBB6 729 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 ZNF175Q9Y473 711 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 ABCD4O14678 606 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 PRICKLE3O43900 615 aaPredicted RBP12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 SIX6O95475 246 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 PSMB10P40306 273 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 NAA10P41227 235 aaPredicted RBP12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 TAS2R20P59543 309 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 MCATQ8IVS2 390 aaKnown RBP12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 SLC43A2Q8N370 569 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 OR52E2Q8NGJ4 325 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 OR14A16Q8NHC5 309 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 C15orf40Q8WUR7 153 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 MIB2Q96AX9 1013 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 LRFN5Q96NI6 719 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 USP36Q9P275 1121 aaKnown RBP12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 DOCK9Q9BZ29 2069 aa12.85□□□□□ -0.35
SCNN1A-201ENST00000228916 CHURC1-FNTBB4DL54 471 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 F5H5P2 479 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 APOC3P02656 99 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 ZNF35P13682 527 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 DDX6P26196 483 aaKnown RBP eCLIP12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 MPGP29372 298 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 PLAURQ03405 335 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 RBMS2Q15434 407 aaKnown RBP12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 ZNF613Q6PF04 617 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 C17orf107Q6ZR85 190 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 ANKRD33Q7Z3H0 272 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 OR2AK2Q8NG84 335 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 ZDHHC1Q8WTX9 485 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 OR8D1Q8WZ84 308 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 COL26A1Q96A83 441 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 CHRNA9Q9UGM1 479 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 PRELID3BQ9Y3B1 194 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 MPTX1A8MV57 137 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 PEX12O00623 359 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 OC90Q02509 493 aaPredicted RBP12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 MELKQ14680 651 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 EXOSC6Q5RKV6 272 aaKnown RBP12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 SDR9C7Q8NEX9 313 aa12.84□□□□□ -0.35
SCNN1A-201ENST00000228916 WFIKKN2Q8TEU8 576 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms