RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 SF3A3Q12874 501 aaKnown RBP eCLIP12.53□□□□□ -0.4
GPN3-201ENST00000228827 ELOA3BQ3SY89 546 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 ZNF672Q499Z4 452 aaPredicted RBP12.53□□□□□ -0.4
GPN3-201ENST00000228827 TMEM225Q6GV28 225 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 AAED1Q7RTV5 226 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 ZIC4Q8N9L1 334 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 ELOA3Q8NG57 546 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 IGFBPL1Q8WX77 278 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 FBXW5Q969U6 566 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 SLC25A36Q96CQ1 311 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 GSX2Q9BZM3 304 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 ZNF385DQ9H6B1 395 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 PRDM4Q9UKN5 801 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 TRIM33Q9UPN9 1127 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 CORO2BQ9UQ03 480 aa12.53□□□□□ -0.4
GPN3-201ENST00000228827 AHSA1O95433 338 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 INHBBP09529 407 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 HTR2AP28223 471 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 RPS5P46782 204 aaKnown RBP12.52□□□□□ -0.41
GPN3-201ENST00000228827 ZNF83P51522 516 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 MTPNP58546 118 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 SELPLGQ14242 412 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 ADRM1Q16186 407 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 GABRA6Q16445 453 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 RUNDC3AQ59EK9 446 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 DHRS4L2Q6PKH6 230 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 Q71RC1 249 aaPredicted RBP12.52□□□□□ -0.41
GPN3-201ENST00000228827 RETREG3Q86VR2 466 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 P2RY8Q86VZ1 359 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 RNF217Q8TC41 542 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 STK35Q8TDR2 534 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 TMEM45BQ96B21 275 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 KTI12Q96EK9 354 aaPredicted RBP12.52□□□□□ -0.41
GPN3-201ENST00000228827 SPATA5L1Q9BVQ7 753 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 SF3B5Q9BWJ5 86 aaKnown RBP12.52□□□□□ -0.41
GPN3-201ENST00000228827 C1QTNF6Q9BXI9 259 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 TMEM38AQ9H6F2 299 aa12.52□□□□□ -0.41
GPN3-201ENST00000228827 ABCA4P78363 2273 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 A0A1B0GWA3 101 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 PRORSD1PA6NEY8 169 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 TRIM64A6NGJ6 449 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 TRIM64BA6NI03 449 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 H7C1Q1 480 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 M0R1B8 84 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 ABCD4O14678 606 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 SMAD7O15105 426 aaKnown RBP12.51□□□□□ -0.41
GPN3-201ENST00000228827 NPIPB7O75200 414 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 SOD3P08294 240 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 GPX2P18283 190 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 CDH2P19022 906 aaPredicted RBP12.51□□□□□ -0.41
GPN3-201ENST00000228827 CBLP22681 906 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 P2RY4P51582 365 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 RPS4XP62701 263 aaKnown RBP12.51□□□□□ -0.41
GPN3-201ENST00000228827 EGR4Q05215 589 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 NFYCQ13952 458 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 CYP51A1Q16850 503 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 CIARTQ8N365 385 aaPredicted RBP12.51□□□□□ -0.41
GPN3-201ENST00000228827 KDM8Q8N371 416 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 HIPK4Q8NE63 616 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 SMAP2Q8WU79 429 aaPredicted RBP12.51□□□□□ -0.41
GPN3-201ENST00000228827 STON2Q8WXE9 905 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 SLC35B4Q969S0 331 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 ZNF607Q96SK3 696 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 CGREF1Q99674 301 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 PTDSS2Q9BVG9 487 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 TMEM120AQ9BXJ8 343 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 TRIM2Q9C040 744 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 SEC14L4Q9UDX3 406 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 SLC13A4Q9UKG4 626 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 ANGPT4Q9Y264 503 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 MAGED1Q9Y5V3 778 aaPredicted RBP12.51□□□□□ -0.41
GPN3-201ENST00000228827 SLC25A15Q9Y619 301 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 GMEB1Q9Y692 573 aa12.51□□□□□ -0.41
GPN3-201ENST00000228827 SHISA9B4DS77 424 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 PDLIM1O00151 329 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 KRT33AO76009 404 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 PNMTP11086 282 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 PTNP21246 168 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 GTF2E2P29084 291 aaKnown RBP12.5□□□□□ -0.41
GPN3-201ENST00000228827 CDH11P55287 796 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 ATP5J2P56134 94 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 NCALDP61601 193 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 LGALS3BPQ08380 585 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 DMTNQ08495 405 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 SPOCK1Q08629 439 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 ALG10BQ5I7T1 473 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 OR7E24Q6IFN5 339 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 PRSS57Q6UWY2 283 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 PTOV1Q86YD1 416 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 ARMC8Q8IUR7 673 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 DPP10Q8N608 796 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 WDR31Q8NA23 367 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 SMYD1Q8NB12 490 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 MFSD8Q8NHS3 518 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 ANKRD27Q96NW4 1050 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 MUS81Q96NY9 551 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 WFDC6Q9BQY6 131 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 SIKE1Q9BRV8 207 aa12.5□□□□□ -0.41
GPN3-201ENST00000228827 CISD1Q9NZ45 108 aaKnown RBP12.5□□□□□ -0.41
GPN3-201ENST00000228827 RASD1Q9Y272 281 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms