RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 ZDHHC5Q9C0B5 715 aa17.58■□□□□ 0.4
SMPD3-201ENST00000219334 RNF212BA8MTL3 300 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 FCGR2AP12318 317 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 GLULP15104 373 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 CXADRP78310 365 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 CATR1Q13166 79 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 IKZF1Q13422 519 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 GTPBP8Q8N3Z3 284 aaPredicted RBP17.57■□□□□ 0.4
SMPD3-201ENST00000219334 ZNF454Q8N9F8 522 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 TM4SF18Q96CE8 201 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 CENPOQ9BU64 300 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 TBX21Q9UL17 535 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 NUDT7P0C024 238 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 DLSTP36957 453 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 CCR5P51681 352 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 RRAS2P62070 204 aaPredicted RBP17.57■□□□□ 0.4
SMPD3-201ENST00000219334 SF3A2Q15428 464 aaKnown RBP17.57■□□□□ 0.4
SMPD3-201ENST00000219334 NPSR1Q6W5P4 371 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 DCUN1D4Q92564 292 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 AP1S3Q96PC3 154 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 ZNF281Q9Y2X9 895 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 GPRIN2O60269 458 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 NFATC3Q12968 1075 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 SIMC1Q8NDZ2 872 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 SDSLQ96GA7 329 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 DPCDQ9BVM2 203 aaPredicted RBP17.57■□□□□ 0.4
SMPD3-201ENST00000219334 QRSL1Q9H0R6 528 aaKnown RBP17.57■□□□□ 0.4
SMPD3-201ENST00000219334 LRFN1Q9P244 771 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 MEIS3P1A6NDR6 274 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 CDK1P06493 297 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 PTGER4P35408 488 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 S100A12P80511 92 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 ELAVL1Q15717 326 aaKnown RBP17.57■□□□□ 0.4
SMPD3-201ENST00000219334 HENMT1Q5T8I9 393 aaKnown RBP17.57■□□□□ 0.4
SMPD3-201ENST00000219334 GOT1L1Q8NHS2 421 aaPredicted RBP17.57■□□□□ 0.4
SMPD3-201ENST00000219334 NT5C3BQ969T7 300 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 UPRTQ96BW1 309 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 BIRC8Q96P09 236 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 TNFRSF13CQ96RJ3 184 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 FBXO7Q9Y3I1 522 aa17.57■□□□□ 0.4
SMPD3-201ENST00000219334 NKX6-3A6NJ46 265 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 LRRC30A6NM36 301 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 GPR137BO60478 399 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 OR8B8Q15620 311 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 COMTD1Q86VU5 262 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 SPEM1Q8N4L4 309 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 ALG12Q9BV10 488 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 FAM166BA8MTA8 275 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 TARM1B6A8C7 271 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 H7C1C5 153 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 J3KTA2 159 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 ENSAO43768 121 aaKnown RBP17.56■□□□□ 0.4
SMPD3-201ENST00000219334 LUMP51884 338 aaPredicted RBP17.56■□□□□ 0.4
SMPD3-201ENST00000219334 LCN6P62502 163 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 ZNF92Q03936 586 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 LCN10Q6JVE6 187 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 APH1AQ96BI3 265 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 ITGAMP11215 1152 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 RPS18P62269 152 aaKnown RBP17.56■□□□□ 0.4
SMPD3-201ENST00000219334 SNX18Q96RF0 628 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 GLIPR2Q9H4G4 154 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 ZNF355PQ9NSJ1 428 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 H0Y8X5 98 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 SEC14L2O76054 403 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 PYCR3Q53H96 274 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 FAM69AQ5T7M9 428 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 SLC35D2Q76EJ3 337 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 CMIPQ8IY22 773 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 OR4F15Q8NGB8 312 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 SLC29A1Q99808 456 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 CPPED1Q9BRF8 314 aaPredicted RBP17.56■□□□□ 0.4
SMPD3-201ENST00000219334 C12orf49Q9H741 205 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 LYRM4Q9HD34 91 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 MED17Q9NVC6 651 aa17.56■□□□□ 0.4
SMPD3-201ENST00000219334 A8MVM7 634 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 TSPAN15O95858 294 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 OR8G3PP0DMU2 310 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 CD79BP40259 229 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 GPR155Q7Z3F1 870 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 PDZD9Q8IXQ8 264 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 BRIX1Q8TDN6 353 aaKnown RBP17.55■□□□□ 0.4
SMPD3-201ENST00000219334 ZC3HAV1LQ96H79 300 aaKnown RBP17.55■□□□□ 0.4
SMPD3-201ENST00000219334 A0A1B0GWA3 101 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 A0A1W2PPH5 198 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 TMEM202A6NGA9 273 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 F5H5P2 479 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 STT3AP46977 705 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 MBOAT2Q6ZWT7 520 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 MARCH3Q86UD3 253 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 LILRA3Q8N6C8 439 aaPredicted RBP17.55■□□□□ 0.4
SMPD3-201ENST00000219334 FRMD1Q8N878 549 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 SLC25A43Q8WUT9 341 aaPredicted RBP17.55■□□□□ 0.4
SMPD3-201ENST00000219334 NIPAL2Q9H841 368 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 B3GAT1Q9P2W7 334 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 CACNG2Q9Y698 323 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 SCN11AQ9UI33 1791 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 PRKRAO75569 313 aaKnown RBP17.55■□□□□ 0.4
SMPD3-201ENST00000219334 TRHRP34981 398 aaPredicted RBP17.55■□□□□ 0.4
SMPD3-201ENST00000219334 LRRC56Q8IYG6 542 aaPredicted RBP17.55■□□□□ 0.4
SMPD3-201ENST00000219334 TMEM246Q9BRR3 403 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms