RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 CDH10Q9Y6N8 788 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 ADAMTS20P59510 1910 aa9.15□□□□□ -0.94
USP11-201ENST00000218348 BLOC1S5-TXNDC5H3BN57 136 aa9.15□□□□□ -0.95
USP11-201ENST00000218348 FPR3P25089 353 aa9.15□□□□□ -0.95
USP11-201ENST00000218348 ACVR1BP36896 505 aa9.15□□□□□ -0.95
USP11-201ENST00000218348 WNT4P56705 351 aa9.15□□□□□ -0.95
USP11-201ENST00000218348 HNRNPKP61978 463 aaKnown RBP eCLIP9.15□□□□□ -0.95
USP11-201ENST00000218348 SLC3A1Q07837 685 aa9.15□□□□□ -0.95
USP11-201ENST00000218348 DSG2Q14126 1118 aa9.15□□□□□ -0.95
USP11-201ENST00000218348 PRTGQ2VWP7 1150 aa9.15□□□□□ -0.95
USP11-201ENST00000218348 SUMF1Q8NBK3 374 aa9.15□□□□□ -0.95
USP11-201ENST00000218348 FAM98AQ8NCA5 519 aaKnown RBP9.15□□□□□ -0.95
USP11-201ENST00000218348 PROKR2Q8NFJ6 384 aa9.15□□□□□ -0.95
USP11-201ENST00000218348 S100ZQ8WXG8 99 aa9.15□□□□□ -0.95
USP11-201ENST00000218348 HS6ST2Q96MM7 605 aa9.15□□□□□ -0.95
USP11-201ENST00000218348 MMP27Q9H306 513 aa9.15□□□□□ -0.95
USP11-201ENST00000218348 Q9N2J8 555 aa9.15□□□□□ -0.95
USP11-201ENST00000218348 GRIP1Q9Y3R0 1128 aa9.15□□□□□ -0.95
USP11-201ENST00000218348 ZFHX4Q86UP3 3567 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 FAM25AB3EWG3 89 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 FAM25CB3EWG5 89 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 FAM25GB3EWG6 89 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 CT45A8P0DMV1 189 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 CT45A9P0DMV2 189 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 TNFSF8P32971 234 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 SLC1A3P43003 542 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 FABP5Q01469 135 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 KLHL22Q53GT1 634 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 CT45A2Q5DJT8 189 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 ARL9Q6T311 187 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 BEND4Q6ZU67 534 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 MED25Q71SY5 747 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 SLC35F3Q8IY50 421 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 RFLNBQ8N5W9 214 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 POGLUT1Q8NBL1 392 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 OR52E2Q8NGJ4 325 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 FAM174AQ8TBP5 190 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 TCTN2Q96GX1 697 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 FOXN4Q96NZ1 517 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 ERMAPQ96PL5 475 aaPredicted RBP9.14□□□□□ -0.95
USP11-201ENST00000218348 TEX12Q9BXU0 123 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 TESQ9UGI8 421 aaKnown RBP9.14□□□□□ -0.95
USP11-201ENST00000218348 CBLCQ9ULV8 474 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 COPS3Q9UNS2 423 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 ISPDA4D126 451 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 POM121CA8CG34 1229 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 J3QLW9 94 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 CASKO14936 926 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 LAMTOR5O43504 91 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 MRPS14O60783 128 aaKnown RBP9.14□□□□□ -0.95
USP11-201ENST00000218348 CTNSO60931 367 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 HMGN1P05114 100 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 ZNF19P17023 458 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 ITPKBP27987 946 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 STAT5AP42229 794 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 SSTP61278 116 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 CFHR1Q03591 330 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 TIMM50Q3ZCQ8 353 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 TMEM201Q5SNT2 666 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 MEDAGQ5VYS4 303 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 BCORP1Q8N888 145 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 ZNF527Q8NB42 609 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 CTHRC1Q96CG8 243 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 NXF5Q9H1B4 397 aaKnown RBP9.14□□□□□ -0.95
USP11-201ENST00000218348 CUTCQ9NTM9 273 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 STUB1Q9UNE7 303 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 PLCL2Q9UPR0 1127 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 PCNX3Q9H6A9 2034 aa9.14□□□□□ -0.95
USP11-201ENST00000218348 A0A087WV62 115 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 E9PI62 339 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 GTPBP1O00178 669 aaKnown RBP9.13□□□□□ -0.95
USP11-201ENST00000218348 TFECO14948 347 aaPredicted RBP9.13□□□□□ -0.95
USP11-201ENST00000218348 GDF9O60383 454 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 TBXA2RP21731 343 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 PPP5CP53041 499 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 FOXK2Q01167 660 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 NSDHLQ15738 373 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 CD226Q15762 336 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 CCDC157Q569K6 752 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 PRAMEF8Q5VWM4 474 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 PRAMEF7Q5VXH5 474 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 SYT9Q86SS6 491 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 MARCH9Q86YJ5 346 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 SLC25A45Q8N413 288 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 OR6F1Q8NGZ6 308 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 VSTM2LQ96N03 204 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 TSSK2Q96PF2 358 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 ELF4Q99607 663 aaPredicted RBP9.13□□□□□ -0.95
USP11-201ENST00000218348 DNAJB12Q9NXW2 375 aaKnown RBP9.13□□□□□ -0.95
USP11-201ENST00000218348 KLK4Q9Y5K2 254 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 H7C1C5 153 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 NKX2-2O95096 273 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 RD3LP0DJH9 198 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 GIMD1P0DJR0 217 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 HK1P19367 917 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 RPS27P42677 84 aaKnown RBP9.13□□□□□ -0.95
USP11-201ENST00000218348 LCN6P62502 163 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 LPAL2Q16609 132 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 C14orf28Q4W4Y0 310 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms