RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ACTG2P63267 376 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 NKX3-2P78367 333 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 HES1Q14469 280 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 HNF4GQ14541 408 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 TMPRSS7Q7RTY8 843 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 CA13Q8N1Q1 262 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 ADAMTS16Q8TE57 1224 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 RAB39BQ96DA2 213 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 ATP6V1G1O75348 118 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 IFNGR1P15260 489 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 HOXD12P35452 270 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 TRMT12Q53H54 448 aaKnown RBP12.7□□□□□ -0.38
SIX4-201ENST00000216513 OTUD1Q5VV17 481 aaPredicted RBP12.7□□□□□ -0.38
SIX4-201ENST00000216513 CCDC71Q8IV32 467 aaPredicted RBP12.7□□□□□ -0.38
SIX4-201ENST00000216513 CNTN4Q8IWV2 1026 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 TBC1D15Q8TC07 691 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 KLHL15Q96M94 604 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 COG8Q96MW5 612 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 SLC30A2Q9BRI3 323 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 AIFM2Q9BRQ8 373 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 LHX9Q9NQ69 397 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 CRISP1P54107 249 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 OR5AS1Q8N127 324 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 NRG4Q8WWG1 115 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 SCGB3A2Q96PL1 93 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 MED20Q9H944 212 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 RAB9BQ9NP90 201 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 PLXNB2O15031 1838 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 OTOL1A6NHN0 477 aaPredicted RBP12.7□□□□□ -0.38
SIX4-201ENST00000216513 NKX6-3A6NJ46 265 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 F8A1P23610 371 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 ATP6AP1Q15904 470 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 C11orf40Q8WZ69 217 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 HSD17B8Q92506 261 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 RNF32Q9H0A6 362 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 GLIPR2Q9H4G4 154 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 CASC3O15234 703 aaKnown RBP12.7□□□□□ -0.38
SIX4-201ENST00000216513 CXCL13O43927 109 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 LCMT2O60294 686 aaKnown RBP12.7□□□□□ -0.38
SIX4-201ENST00000216513 GRPP07492 148 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 LSSP48449 732 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 OTPQ5XKR4 325 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 PWWP2BQ6NUJ5 590 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.7□□□□□ -0.38
SIX4-201ENST00000216513 BCDIN3DQ7Z5W3 292 aaKnown RBP12.7□□□□□ -0.38
SIX4-201ENST00000216513 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.7□□□□□ -0.38
SIX4-201ENST00000216513 TMEM102Q8N9M5 508 aaPredicted RBP12.7□□□□□ -0.38
SIX4-201ENST00000216513 IL17RDQ8NFM7 739 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 LRRC20Q8TCA0 184 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 MVB12AQ96EY5 273 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 SLC29A1Q99808 456 aa12.7□□□□□ -0.38
SIX4-201ENST00000216513 ZNF471Q9BX82 626 aaPredicted RBP12.7□□□□□ -0.38
SIX4-201ENST00000216513 A0A1W2PNR3 127 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 hCG_1809904A0A1W2PP81 198 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 A0A1W2PPE2 198 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 A0A1W2PR64 198 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 A0A1W2PRV1 198 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 HSPB6O14558 160 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 FGF17O60258 216 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 CRTAPO75718 401 aaPredicted RBP12.69□□□□□ -0.38
SIX4-201ENST00000216513 SLITRK5O94991 958 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 IDH3GP51553 393 aaPredicted RBP12.69□□□□□ -0.38
SIX4-201ENST00000216513 GRK1Q15835 563 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 GLYR1Q49A26 553 aaPredicted RBP12.69□□□□□ -0.38
SIX4-201ENST00000216513 TMEM211Q6ICI0 200 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 LYPD8Q6UX82 237 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 FBXO17Q96EF6 278 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 INTS14Q96SY0 518 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 KNL1Q8NG31 2342 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 A0A096LPE4 126 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 IGHV3-64DA0A0J9YX35 117 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 TEX51A0A1B0GUA7 166 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 A0A1W2PPZ6 126 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 SLC22A1O15245 554 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 SEC14L2O76054 403 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 ARL3P36405 182 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 MAGEA3P43357 314 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 TMEM150AQ86TG1 271 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 BHLHE23Q8NDY6 225 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 OR51T1Q8NGJ9 327 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 OR52N5Q8NH56 324 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 GPBAR1Q8TDU6 330 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 ZNF431Q8TF32 576 aaPredicted RBP12.69□□□□□ -0.38
SIX4-201ENST00000216513 S100A16Q96FQ6 103 aaKnown RBP12.69□□□□□ -0.38
SIX4-201ENST00000216513 HSPB11Q9Y547 144 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 OR6C76A6NM76 312 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 CRYAAP02489 173 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 AMY2BP19961 511 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 FRKP42685 505 aaPredicted RBP12.69□□□□□ -0.38
SIX4-201ENST00000216513 RGS19P49795 217 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 BMXP51813 675 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 ALKBH6Q3KRA9 238 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 KDM8Q8N371 416 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 SORT1Q99523 831 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 KCNJ16Q9NPI9 418 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 FKBP14Q9NWM8 211 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 ENPP4Q9Y6X5 453 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 COL24A1Q17RW2 1714 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 RREB1Q92766 1687 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 H0YJX3 145 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms