RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 A0A096LPI6 279 aa13.9□□□□□ -0.18
ERCC1-201ENST00000013807 A8MVM7 634 aa13.9□□□□□ -0.18
ERCC1-201ENST00000013807 SSX4O60224 188 aa13.9□□□□□ -0.18
ERCC1-201ENST00000013807 FZD7O75084 574 aa13.9□□□□□ -0.18
ERCC1-201ENST00000013807 CRISP3P54108 245 aa13.9□□□□□ -0.18
ERCC1-201ENST00000013807 LOXL1Q08397 574 aaPredicted RBP13.9□□□□□ -0.18
ERCC1-201ENST00000013807 SPOCK1Q08629 439 aa13.9□□□□□ -0.18
ERCC1-201ENST00000013807 LIN52Q52LA3 116 aa13.9□□□□□ -0.18
ERCC1-201ENST00000013807 OTUD3Q5T2D3 398 aaPredicted RBP13.9□□□□□ -0.18
ERCC1-201ENST00000013807 HHATQ5VTY9 493 aa13.9□□□□□ -0.18
ERCC1-201ENST00000013807 OR52P1PQ8NH57 321 aa13.9□□□□□ -0.18
ERCC1-201ENST00000013807 FKRPQ9H9S5 495 aa13.9□□□□□ -0.18
ERCC1-201ENST00000013807 TPT1P8Q9HAU6 139 aa13.9□□□□□ -0.18
ERCC1-201ENST00000013807 ZIM2Q9NZV7 527 aa13.9□□□□□ -0.18
ERCC1-201ENST00000013807 IGHV4-30-2A0A087WSY4 118 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 A0A0G2JPF8 293 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 A0A1W2PR80 420 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 FAM234BA2RU67 622 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 OR6C65A6NJZ3 312 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 HNRNPCL2B2RXH8 293 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 HNRNPCL3B7ZW38 293 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 HNRNPCL1O60812 293 aaKnown RBP13.89□□□□□ -0.19
ERCC1-201ENST00000013807 HNRNPCL4P0DMR1 293 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 BMP2P12643 396 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 CXCR1P25024 350 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 APOBEC3AP31941 199 aaPredicted RBP13.89□□□□□ -0.19
ERCC1-201ENST00000013807 NUDT6P53370 316 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 PRPS1P60891 318 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 SLC25A3Q00325 362 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 CEACAM7Q14002 265 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 RAB35Q15286 201 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 PRAMEF8Q5VWM4 474 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 PRAMEF7Q5VXH5 474 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 ATG16L1Q676U5 607 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 ZNF836Q6ZNA1 936 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 ABHD12BQ7Z5M8 362 aaPredicted RBP13.89□□□□□ -0.19
ERCC1-201ENST00000013807 VRK2Q86Y07 508 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 OR9K2Q8NGE7 335 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 PNPT1Q8TCS8 783 aaKnown RBP13.89□□□□□ -0.19
ERCC1-201ENST00000013807 ZNF385AQ96PM9 386 aaKnown RBP13.89□□□□□ -0.19
ERCC1-201ENST00000013807 ZNF317Q96PQ6 595 aaPredicted RBP13.89□□□□□ -0.19
ERCC1-201ENST00000013807 PAIP2Q9BPZ3 127 aaKnown RBP13.89□□□□□ -0.19
ERCC1-201ENST00000013807 CENPHQ9H3R5 247 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 POU2F3Q9UKI9 436 aa13.89□□□□□ -0.19
ERCC1-201ENST00000013807 TMEM120BA0PK00 339 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 M0R1B8 84 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 ZNF500O60304 480 aaPredicted RBP13.88□□□□□ -0.19
ERCC1-201ENST00000013807 AKR7A3O95154 331 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 WNT11O96014 354 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 GKN3PP0CG01 181 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 BMP4P12644 408 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 ETFAP13804 333 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 SLC25A16P16260 332 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 PTNP21246 168 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 MRPL19P49406 292 aaKnown RBP13.88□□□□□ -0.19
ERCC1-201ENST00000013807 FABP6P51161 128 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 DSTNP60981 165 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 COPZ1P61923 177 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 VLDLRP98155 873 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 LARS2Q15031 903 aaKnown RBP13.88□□□□□ -0.19
ERCC1-201ENST00000013807 SWI5Q1ZZU3 235 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 C3orf36Q3SXR2 165 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 CLEC2AQ6UVW9 174 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 CREB3L2Q70SY1 520 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 AAED1Q7RTV5 226 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 CLIP4Q8N3C7 705 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 ANKK1Q8NFD2 765 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 STK35Q8TDR2 534 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 TNFRSF13CQ96RJ3 184 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 SPATA9Q9BWV2 254 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 BCL2L10Q9HD36 194 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 TMEM160Q9NX00 188 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 ZNF232Q9UNY5 417 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 IFT52Q9Y366 437 aa13.88□□□□□ -0.19
ERCC1-201ENST00000013807 A8MV72 311 aaPredicted RBP13.87□□□□□ -0.19
ERCC1-201ENST00000013807 TMEM229AB2RXF0 380 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 KLF11O14901 512 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 F12P00748 615 aaPredicted RBP13.87□□□□□ -0.19
ERCC1-201ENST00000013807 CSF3P09919 207 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 HOXB1P14653 301 aaPredicted RBP13.87□□□□□ -0.19
ERCC1-201ENST00000013807 EFNA4P52798 201 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 CHRNB3Q05901 458 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 OR7A5Q15622 319 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 MST1LQ2TV78 715 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 SLC9B1Q4ZJI4 515 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 TMEM225Q6GV28 225 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 PODNL1Q6PEZ8 512 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 FAM169BQ8N8A8 192 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 MFSD8Q8NHS3 518 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 MAGEE2Q8TD90 523 aaPredicted RBP13.87□□□□□ -0.19
ERCC1-201ENST00000013807 C10orf105Q8TEF2 133 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 PROX1Q92786 737 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 C3orf49Q96BT1 292 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 ITCHQ96J02 903 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 C1QTNF6Q9BXI9 259 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 ARMC7Q9H6L4 198 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 RMND5AQ9H871 391 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 MANSC1Q9H8J5 431 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 CRNNQ9UBG3 495 aaPredicted RBP13.87□□□□□ -0.19
ERCC1-201ENST00000013807 RASD1Q9Y272 281 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms