RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Mmgt2Q8R3L0 123 aa19.36■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Pex19Q8VCI5 299 aa19.36■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Slc10a6Q9CXB2 373 aa19.36■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Wdsub1Q9D0I6 474 aa19.36■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Eci2Q9WUR2 391 aa19.36■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Zfp54E9PW05 585 aa19.35■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Zfp870J3QMA4 560 aa19.35■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Olfr190K7N5T5 307 aa19.35■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Cdk5P49615 292 aa19.35■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Hcrtr2P58308 460 aa19.35■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 SmsP97355 366 aa19.35■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Rnf133Q14B02 382 aa19.35■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Fads6Q80UG1 342 aa19.35■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Gm21627Q810R0 219 aa19.35■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Slc25a1Q8JZU2 311 aa19.35■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Prkd3Q8K1Y2 889 aa19.35■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Olfr1090Q8VGA6 313 aa19.35■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 AmnQ99JB7 458 aaKnown RBP19.35■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Metap1dQ9CPW9 335 aa19.35■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 NtsQ9D3P9 169 aa19.35■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Eif2s3yQ9Z0N2 472 aa19.35■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 SetxA2AKX3 2646 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Gm13124A2A752 406 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Zfp981A2A8V7 445 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Mptx2D3YYJ7 219 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Gm10479K7N6H4 105 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Impdh2P24547 514 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Cd40P27512 289 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Ptx3P48759 381 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 TstP52196 297 aaKnown RBP19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Nkx3-2P97503 333 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 MakQ04859 622 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Scgb1a1Q06318 96 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 UradQ283N4 178 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Tmem181aQ3U3W2 474 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Gm10750Q3V0I0 133 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Vgll4Q80V24 287 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Rhbdd3Q8BP97 385 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Acot4Q8BWN8 421 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Acp7Q8BX37 438 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Coq9Q8K1Z0 313 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Tmem268Q8R239 342 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Dok3Q9QZK7 444 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 RlimQ9WTV7 600 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Gm11361A0A1Y7VKY1 152 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Olfr730E9Q8M3 318 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Zfp760E9QAF5 666 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Vmn1r16K7N775 303 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Mpzl2O70255 215 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Klk1b16P04071 261 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Rps18P62270 152 aaKnown RBP19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Smim24Q0VG18 120 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Pgr15lQ80T54 456 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Clba1Q8BHN9 321 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Rnf26Q8BUH7 424 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Zfp119bQ8K0G9 543 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Rbms2Q8VC70 383 aaKnown RBP19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Med9Q8VCS6 142 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Olfr341Q8VGK9 313 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Mrgprb4Q91ZC0 321 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Tmem53Q9D0Z3 276 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Tmed10Q9D1D4 219 aaKnown RBP19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Ca13Q9D6N1 262 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Snx5Q9D8U8 404 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 AgkQ9ESW4 421 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 Olfr545Q9WU94 316 aa19.34■□□□□ 0.69
Ccdc88a-202ENSMUST00000109477 SvilQ8K4L3 2170 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Slc37a4A0A1L1SUI3 450 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Gm36864A0A1Y7VJE6 447 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 DbiP31786 87 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Olfr6P34986 316 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 SnrpgP62309 76 aaKnown RBP19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Gnb5P62881 395 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Ctf2P83714 204 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Il15raQ60819 263 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 BocQ6AZB0 1110 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Znf511Q6P0X2 227 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Shc4Q6S5L9 626 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Tgm6Q8BM11 706 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 HscbQ8K3A0 234 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Pom121Q8K3Z9 1200 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Abhd14bQ8VCR7 210 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Sntb1Q99L88 537 aaKnown RBP19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Lyrm1Q9CQB7 122 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Izumo2Q9DA16 220 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Trappc4Q9ES56 219 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 RangrfQ9JIB0 185 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Cxcl15Q9WVL7 167 aa19.33■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Smurf2A2A5Z6 748 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Gm5072A2AHM1 344 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Macc1E9PXX8 851 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Vmn2r99H3BK37 856 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Phkg1P07934 388 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Mfap2P55002 183 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Pou3f4P62515 361 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Rps15P62843 145 aaKnown RBP19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 EbpP70245 230 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Q3U4G0 281 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Nox3Q672J9 568 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Otud6aQ6IE21 290 aa19.32■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms