RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Cops3O88543 423 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Sox11Q7M6Y2 395 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Vmn1r84Q8R284 318 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr446Q8VEV0 308 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 RtcAQ9D7H3 366 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Dpy19l1A6X919 746 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Ccl26F8VQM2 93 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Vmn1r25H3BLP0 302 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Itgb2P11835 771 aaKnown RBP11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Etv4P28322 485 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Rps10P63325 165 aaKnown RBP11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Hrh1P70174 488 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Tmem268Q8R239 342 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr1163Q8VFR4 316 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Slc7a13Q91WN3 478 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Lrg1Q91XL1 342 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Fuca1Q99LJ1 452 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Mrps14Q9CR88 128 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Kti12Q9D1R2 351 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Mcts1Q9DB27 181 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Kcng2F7A6P6 480 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr224M9MMJ7 314 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Klra4Q60651 263 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Shkbp1Q6P7W2 704 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Smim3Q99PE5 60 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 C1galt1Q9JJ06 363 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Actr10Q9QZB7 417 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 PlpbpQ9Z2Y8 274 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Slc16a5G5E8K6 468 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 F3P20352 294 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Secisbp2Q3U1C4 858 aaKnown RBP11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Zic2Q62520 530 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Elfn2Q68FM6 823 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr1137Q7TR40 310 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Ska3Q8C263 411 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Spem2Q8C5U4 503 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Utp15Q8C7V3 528 aaKnown RBP11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr569Q8VGZ2 314 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr73Q920P2 313 aa11.23□□□□□ -0.61
Trim56-201ENSMUST00000054384 Spats1A2RRY8 269 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Zfp994J3QM38 661 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Cd160O88875 185 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Tcf7Q00417 419 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gm853Q3UNZ2 425 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Rims3Q80U57 307 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Cdk5rap1Q8BTW8 588 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Oit3Q8R4V5 546 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr854Q8VFF1 315 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Acss1Q99NB1 682 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Vmn1r29Q9EQ41 303 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Adamts5Q9R001 930 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Ces2gE9PV38 560 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 E9Q0B3 247 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Sstr2P30875 369 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 RabggtbP53612 339 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Dlx5P70396 289 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 EvlP70429 414 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Pin1rt1Q3ULQ2 159 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 4930438A08RikQ5SPH3 536 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Tbccd1Q640P7 552 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Surf4Q64310 269 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Actbl2Q8BFZ3 376 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Wdr92Q8BGF3 357 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Katnbl1Q9CWJ3 299 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr419E9Q0Y7 313 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gm2056J3QQ02 144 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 MagP20917 626 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Igfbp2P47877 305 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 2410002F23RikQ3TE80 284 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Znf689Q8BKK5 500 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 CebpzosQ8BTE5 80 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Tmem200aQ8C817 491 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 HaghQ99KB8 309 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Lamp5Q9D387 280 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Trem1Q9JKE2 230 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Scn8aQ9WTU3 1978 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr1291-ps1A0A286YE47 326 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Rasd1O35626 280 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Pcbd1P61458 104 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 St3gal3P97325 374 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 MitfQ08874 526 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Tle4Q62441 773 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr1031Q7TR87 336 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gjc2Q8BQU6 440 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr1449Q8VEV8 314 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Naalad2Q9CZR2 740 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Cmtm8Q9CZR4 173 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Arpc5lQ9D898 153 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 5830411N06RikB3F5L4 1112 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Zmat3O54836 290 aaKnown RBP11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gpr25P0C5I1 358 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Rap2bP61226 183 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 DtlQ3TLR7 729 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Nudt21Q9CQF3 227 aaKnown RBP11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Rpusd4Q9CWX4 377 aaKnown RBP11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 RgrQ9Z2B3 291 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Tdrd6P61407 2134 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Camta1A2A891 1682 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Zfp142G5E869 1843 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 P58686 83 aa11.22□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 39.3 ms