RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 CSF1RP07333 972 aa21.75■■□□□ 1.07
PHGDH-214ENST00000641314 HSP90B1P14625 803 aaKnown RBP21.75■■□□□ 1.07
PHGDH-214ENST00000641314 PTPN12Q05209 780 aaKnown RBP21.75■■□□□ 1.07
PHGDH-214ENST00000641314 COPRSQ9NQ92 184 aa21.75■■□□□ 1.07
PHGDH-214ENST00000641314 PNPLA7Q6ZV29 1317 aa21.75■■□□□ 1.07
PHGDH-214ENST00000641314 CARMIL3Q8ND23 1372 aa21.75■■□□□ 1.07
PHGDH-214ENST00000641314 NPHP1O15259 732 aa21.74■■□□□ 1.07
PHGDH-214ENST00000641314 SLC15A2Q16348 729 aa21.74■■□□□ 1.07
PHGDH-214ENST00000641314 CCDC57Q2TAC2 916 aa21.74■■□□□ 1.07
PHGDH-214ENST00000641314 CCDC125Q86Z20 511 aa21.74■■□□□ 1.07
PHGDH-214ENST00000641314 C16orf71Q8IYS4 520 aaPredicted RBP21.74■■□□□ 1.07
PHGDH-214ENST00000641314 RHPN1Q8TCX5 695 aa21.74■■□□□ 1.07
PHGDH-214ENST00000641314 KIF1BPQ96EK5 621 aa21.74■■□□□ 1.07
PHGDH-214ENST00000641314 IL1RAPL2Q9NP60 686 aa21.74■■□□□ 1.07
PHGDH-214ENST00000641314 ERC1Q8IUD2 1116 aa21.74■■□□□ 1.07
PHGDH-214ENST00000641314 ZNF594Q96JF6 807 aaPredicted RBP21.74■■□□□ 1.07
PHGDH-214ENST00000641314 GREM2Q9H772 168 aa21.74■■□□□ 1.07
PHGDH-214ENST00000641314 IFIT5Q13325 482 aaKnown RBP21.73■■□□□ 1.07
PHGDH-214ENST00000641314 TAF7LQ5H9L4 462 aa21.73■■□□□ 1.07
PHGDH-214ENST00000641314 TPTE2Q6XPS3 522 aa21.73■■□□□ 1.07
PHGDH-214ENST00000641314 ABCC12Q96J65 1359 aa21.72■■□□□ 1.07
PHGDH-214ENST00000641314 ITGA6P23229 1130 aa21.71■■□□□ 1.07
PHGDH-214ENST00000641314 CCDC24Q8N4L8 307 aa21.71■■□□□ 1.07
PHGDH-214ENST00000641314 OTUD7AQ8TE49 926 aaPredicted RBP21.71■■□□□ 1.07
PHGDH-214ENST00000641314 ANKRD18BA2A2Z9 1011 aa21.7■■□□□ 1.06
PHGDH-214ENST00000641314 SASH1O94885 1247 aa21.7■■□□□ 1.06
PHGDH-214ENST00000641314 TM4SF1P30408 202 aa21.7■■□□□ 1.06
PHGDH-214ENST00000641314 CNBD1Q8NA66 436 aa21.7■■□□□ 1.06
PHGDH-214ENST00000641314 CCDC152Q4G0S7 254 aa21.69■■□□□ 1.06
PHGDH-214ENST00000641314 SLC10A5Q5PT55 438 aa21.69■■□□□ 1.06
PHGDH-214ENST00000641314 PLEKHM2Q8IWE5 1019 aa21.69■■□□□ 1.06
PHGDH-214ENST00000641314 QSER1Q2KHR3 1735 aa21.68■■□□□ 1.06
PHGDH-214ENST00000641314 CASZ1Q86V15 1759 aa21.68■■□□□ 1.06
PHGDH-214ENST00000641314 SERPINB2P05120 415 aa21.68■■□□□ 1.06
PHGDH-214ENST00000641314 DDR1Q08345 913 aa21.68■■□□□ 1.06
PHGDH-214ENST00000641314 C3orf67Q6ZVT6 689 aa21.68■■□□□ 1.06
PHGDH-214ENST00000641314 NLGN1Q8N2Q7 840 aa21.68■■□□□ 1.06
PHGDH-214ENST00000641314 EYA2O00167 538 aa21.67■■□□□ 1.06
PHGDH-214ENST00000641314 LRRC24Q50LG9 513 aa21.67■■□□□ 1.06
PHGDH-214ENST00000641314 MSL1Q68DK7 614 aa21.67■■□□□ 1.06
PHGDH-214ENST00000641314 CLASRPQ8N2M8 674 aaKnown RBP21.67■■□□□ 1.06
PHGDH-214ENST00000641314 PUS3Q9BZE2 481 aaKnown RBP21.67■■□□□ 1.06
PHGDH-214ENST00000641314 POLRMTO00411 1230 aaKnown RBP21.65■■□□□ 1.06
PHGDH-214ENST00000641314 TFCP2Q12800 502 aa21.65■■□□□ 1.06
PHGDH-214ENST00000641314 PRR5LQ6MZQ0 368 aa21.65■■□□□ 1.06
PHGDH-214ENST00000641314 ATG9AQ7Z3C6 839 aa21.65■■□□□ 1.06
PHGDH-214ENST00000641314 NLRP3Q96P20 1036 aa21.65■■□□□ 1.06
PHGDH-214ENST00000641314 SEC31BQ9NQW1 1179 aa21.65■■□□□ 1.06
PHGDH-214ENST00000641314 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.65■■□□□ 1.06
PHGDH-214ENST00000641314 TNRC6CQ9HCJ0 1690 aaKnown RBP21.65■■□□□ 1.06
PHGDH-214ENST00000641314 CIAO1O76071 339 aa21.65■■□□□ 1.06
PHGDH-214ENST00000641314 IL15P40933 162 aaPredicted RBP21.65■■□□□ 1.06
PHGDH-214ENST00000641314 ST5P78524 1137 aa21.65■■□□□ 1.06
PHGDH-214ENST00000641314 SF3B3Q15393 1217 aaKnown RBP21.65■■□□□ 1.06
PHGDH-214ENST00000641314 AACSQ86V21 672 aa21.65■■□□□ 1.06
PHGDH-214ENST00000641314 RTL9Q8NET4 1388 aa21.64■■□□□ 1.05
PHGDH-214ENST00000641314 MX1P20591 662 aa21.64■■□□□ 1.05
PHGDH-214ENST00000641314 LDHAL6AQ6ZMR3 332 aa21.64■■□□□ 1.05
PHGDH-214ENST00000641314 IFIT2P09913 472 aaKnown RBP21.63■■□□□ 1.05
PHGDH-214ENST00000641314 CNNM1Q9NRU3 951 aa21.63■■□□□ 1.05
PHGDH-214ENST00000641314 FBXO3Q9UK99 471 aa21.63■■□□□ 1.05
PHGDH-214ENST00000641314 SALL3Q9BXA9 1300 aa21.62■■□□□ 1.05
PHGDH-214ENST00000641314 MMP10P09238 476 aa21.62■■□□□ 1.05
PHGDH-214ENST00000641314 PDE1AP54750 535 aa21.62■■□□□ 1.05
PHGDH-214ENST00000641314 TSHZ3Q63HK5 1081 aa21.62■■□□□ 1.05
PHGDH-214ENST00000641314 UPF1Q92900 1129 aaKnown RBP eCLIP21.62■■□□□ 1.05
PHGDH-214ENST00000641314 SPEF2Q9C093 1822 aa21.62■■□□□ 1.05
PHGDH-214ENST00000641314 EAF2Q96CJ1 260 aaPredicted RBP21.61■■□□□ 1.05
PHGDH-214ENST00000641314 CCDC8Q9H0W5 538 aaPredicted RBP21.61■■□□□ 1.05
PHGDH-214ENST00000641314 LRP5O75197 1615 aa21.61■■□□□ 1.05
PHGDH-214ENST00000641314 IGHMBP2P38935 993 aaKnown RBP21.61■■□□□ 1.05
PHGDH-214ENST00000641314 TNNI3KQ59H18 835 aa21.61■■□□□ 1.05
PHGDH-214ENST00000641314 TTC22Q5TAA0 569 aa21.61■■□□□ 1.05
PHGDH-214ENST00000641314 CDC5LQ99459 802 aaKnown RBP21.61■■□□□ 1.05
PHGDH-214ENST00000641314 MPHOSPH8Q99549 860 aa21.61■■□□□ 1.05
PHGDH-214ENST00000641314 CEP126Q9P2H0 1117 aa21.61■■□□□ 1.05
PHGDH-214ENST00000641314 PARP3Q9Y6F1 533 aa21.61■■□□□ 1.05
PHGDH-214ENST00000641314 FPGT-TNNI3KV9GXZ4 949 aa21.61■■□□□ 1.05
PHGDH-214ENST00000641314 METTL24Q5JXM2 366 aa21.6■■□□□ 1.05
PHGDH-214ENST00000641314 ILDR2Q71H61 639 aa21.6■■□□□ 1.05
PHGDH-214ENST00000641314 RIC1Q4ADV7 1423 aa21.59■■□□□ 1.05
PHGDH-214ENST00000641314 PDGFDQ9GZP0 370 aaPredicted RBP21.59■■□□□ 1.05
PHGDH-214ENST00000641314 OSBPL3Q9H4L5 887 aa21.59■■□□□ 1.05
PHGDH-214ENST00000641314 TLR7Q9NYK1 1049 aaKnown RBP21.59■■□□□ 1.05
PHGDH-214ENST00000641314 STAP2Q9UGK3 403 aa21.59■■□□□ 1.05
PHGDH-214ENST00000641314 RIPOR2Q9Y4F9 1068 aa21.59■■□□□ 1.05
PHGDH-214ENST00000641314 COL4A1P02462 1669 aa21.59■■□□□ 1.05
PHGDH-214ENST00000641314 TAF1P21675 1872 aa21.58■■□□□ 1.05
PHGDH-214ENST00000641314 GSPT1P15170 499 aaKnown RBP21.58■■□□□ 1.05
PHGDH-214ENST00000641314 BMP2KLQ5H9B9 411 aa21.58■■□□□ 1.05
PHGDH-214ENST00000641314 ANKRD18AQ8IVF6 992 aa21.58■■□□□ 1.05
PHGDH-214ENST00000641314 GPATCH3Q96I76 525 aa21.57■■□□□ 1.04
PHGDH-214ENST00000641314 NRXN2Q9P2S2 1712 aa21.57■■□□□ 1.04
PHGDH-214ENST00000641314 DDX46Q7L014 1031 aaKnown RBP21.57■■□□□ 1.04
PHGDH-214ENST00000641314 NEUROD6Q96NK8 337 aa21.57■■□□□ 1.04
PHGDH-214ENST00000641314 ZNF609O15014 1411 aa21.56■■□□□ 1.04
PHGDH-214ENST00000641314 AOX1Q06278 1338 aa21.56■■□□□ 1.04
PHGDH-214ENST00000641314 C8orf34Q49A92 452 aa21.56■■□□□ 1.04
PHGDH-214ENST00000641314 CELF1Q92879 486 aaKnown RBP21.56■■□□□ 1.04
PHGDH-214ENST00000641314 GPR108Q9NPR9 543 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms