RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-238	ENST00000640859	STARD3NL	O95772	234 aa		13.69	□□□□□ -0.22
GFAP-238	ENST00000640859	TRIM28	Q13263	835 aa	Known RBP	13.69	□□□□□ -0.22
GFAP-238	ENST00000640859	TCIRG1	Q13488	830 aa		13.69	□□□□□ -0.22
GFAP-238	ENST00000640859	ZBTB3	Q9H5J0	574 aa		13.69	□□□□□ -0.22
GFAP-238	ENST00000640859	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.69	□□□□□ -0.22
GFAP-238	ENST00000640859	SSUH2	Q9Y2M2	353 aa		13.69	□□□□□ -0.22
GFAP-238	ENST00000640859	SGSM2	O43147	1006 aa		13.68	□□□□□ -0.22
GFAP-238	ENST00000640859	ANAPC15	P60006	121 aa		13.68	□□□□□ -0.22
GFAP-238	ENST00000640859	LMBR1L	Q6UX01	489 aa		13.68	□□□□□ -0.22
GFAP-238	ENST00000640859	SLC4A9	Q96Q91	983 aa		13.68	□□□□□ -0.22
GFAP-238	ENST00000640859	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.68	□□□□□ -0.22
GFAP-238	ENST00000640859	SIL1	Q9H173	461 aa		13.68	□□□□□ -0.22
GFAP-238	ENST00000640859	IL25	Q9H293	177 aa		13.68	□□□□□ -0.22
GFAP-238	ENST00000640859	CYP19A1	P11511	503 aa	Predicted RBP	13.67	□□□□□ -0.22
GFAP-238	ENST00000640859	MCC	P23508	829 aa		13.67	□□□□□ -0.22
GFAP-238	ENST00000640859	DEK	P35659	375 aa	Known RBP	13.67	□□□□□ -0.22
GFAP-238	ENST00000640859	AK7	Q96M32	723 aa		13.67	□□□□□ -0.22
GFAP-238	ENST00000640859	ANO2	Q9NQ90	1003 aa		13.67	□□□□□ -0.22
GFAP-238	ENST00000640859	TNS1	Q9HBL0	1735 aa	Known RBP	13.67	□□□□□ -0.22
GFAP-238	ENST00000640859	SBF2	Q86WG5	1849 aa		13.67	□□□□□ -0.22
GFAP-238	ENST00000640859	EVI5L	Q96CN4	794 aa		13.66	□□□□□ -0.22
GFAP-238	ENST00000640859	LSG1	Q9H089	658 aa	Known RBP	13.66	□□□□□ -0.22
GFAP-238	ENST00000640859	TLR7	Q9NYK1	1049 aa	Known RBP	13.66	□□□□□ -0.22
GFAP-238	ENST00000640859	TFCP2L1	Q9NZI6	479 aa		13.66	□□□□□ -0.22
GFAP-238	ENST00000640859	BTAF1	O14981	1849 aa		13.66	□□□□□ -0.22
GFAP-238	ENST00000640859	MAP3K15	Q6ZN16	1313 aa		13.65	□□□□□ -0.22
GFAP-238	ENST00000640859	ST18	O60284	1047 aa		13.65	□□□□□ -0.22
GFAP-238	ENST00000640859	HSPA4	P34932	840 aa		13.65	□□□□□ -0.22
GFAP-238	ENST00000640859	TFCP2	Q12800	502 aa		13.65	□□□□□ -0.22
GFAP-238	ENST00000640859	TNNI3K	Q59H18	835 aa		13.65	□□□□□ -0.22
GFAP-238	ENST00000640859	KIF6	Q6ZMV9	814 aa		13.65	□□□□□ -0.22
GFAP-238	ENST00000640859	FLAD1	Q8NFF5	587 aa		13.65	□□□□□ -0.22
GFAP-238	ENST00000640859	PALD1	Q9ULE6	856 aa		13.65	□□□□□ -0.22
GFAP-238	ENST00000640859	FPGT-TNNI3K	V9GXZ4	949 aa		13.65	□□□□□ -0.22
GFAP-238	ENST00000640859	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.64	□□□□□ -0.23
GFAP-238	ENST00000640859	RGPD4	Q7Z3J3	1758 aa		13.64	□□□□□ -0.23
GFAP-238	ENST00000640859	PCCA	P05165	728 aa	Predicted RBP	13.64	□□□□□ -0.23
GFAP-238	ENST00000640859	ATG9A	Q7Z3C6	839 aa		13.64	□□□□□ -0.23
GFAP-238	ENST00000640859	IL27	Q8NEV9	243 aa		13.64	□□□□□ -0.23
GFAP-238	ENST00000640859	RUFY2	Q8WXA3	655 aa		13.64	□□□□□ -0.23
GFAP-238	ENST00000640859	PLA2G12B	Q9BX93	195 aa		13.64	□□□□□ -0.23
GFAP-238	ENST00000640859	RAD50	Q92878	1312 aa		13.64	□□□□□ -0.23
GFAP-238	ENST00000640859	ATP5J	P18859	108 aa		13.63	□□□□□ -0.23
GFAP-238	ENST00000640859	MCM4	P33991	863 aa		13.63	□□□□□ -0.23
GFAP-238	ENST00000640859	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.63	□□□□□ -0.23
GFAP-238	ENST00000640859	GPR108	Q9NPR9	543 aa		13.63	□□□□□ -0.23
GFAP-238	ENST00000640859	SNRK	Q9NRH2	765 aa		13.63	□□□□□ -0.23
GFAP-238	ENST00000640859	DIAPH3	Q9NSV4	1193 aa		13.63	□□□□□ -0.23
GFAP-238	ENST00000640859	DBNL	Q9UJU6	430 aa	Known RBP	13.63	□□□□□ -0.23
GFAP-238	ENST00000640859	ANKRD36C	Q5JPF3	1778 aa		13.63	□□□□□ -0.23
GFAP-238	ENST00000640859	HIP1	O00291	1037 aa		13.62	□□□□□ -0.23
GFAP-238	ENST00000640859	CIAO1	O76071	339 aa		13.62	□□□□□ -0.23
GFAP-238	ENST00000640859	RAB3GAP1	Q15042	981 aa		13.62	□□□□□ -0.23
GFAP-238	ENST00000640859	SLC15A2	Q16348	729 aa		13.62	□□□□□ -0.23
GFAP-238	ENST00000640859	CWC27	Q6UX04	472 aa	Known RBP	13.62	□□□□□ -0.23
GFAP-238	ENST00000640859	BOLA2	Q9H3K6	86 aa		13.62	□□□□□ -0.23
GFAP-238	ENST00000640859	ZBTB1	Q9Y2K1	713 aa		13.62	□□□□□ -0.23
GFAP-238	ENST00000640859	RTCB	Q9Y3I0	505 aa	Known RBP	13.62	□□□□□ -0.23
GFAP-238	ENST00000640859	NUP98	P52948	1817 aa		13.62	□□□□□ -0.23
GFAP-238	ENST00000640859	CIC	Q96RK0	1608 aa	Predicted RBP	13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	RREB1	Q92766	1687 aa		13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	EYA2	O00167	538 aa		13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	CSF1R	P07333	972 aa		13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	HSP90AA1	P07900	732 aa	Known RBP	13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	IL6ST	P40189	918 aa	Predicted RBP	13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	IL15	P40933	162 aa	Predicted RBP	13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	MCM2	P49736	904 aa		13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	NEK4	P51957	841 aa		13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	HLF	Q16534	295 aa		13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	HSP90AB3P	Q58FF7	597 aa		13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	RC3H1	Q5TC82	1133 aa	Known RBP	13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	KCNB2	Q92953	911 aa		13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	LRRC4B	Q9NT99	713 aa		13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	CHMP3	Q9Y3E7	222 aa		13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	CDHR2	Q9BYE9	1310 aa		13.61	□□□□□ -0.23
GFAP-238	ENST00000640859	ERVV-1	B6SEH8	477 aa		13.6	□□□□□ -0.23
GFAP-238	ENST00000640859	GNPAT	O15228	680 aa		13.6	□□□□□ -0.23
GFAP-238	ENST00000640859	KCNQ4	P56696	695 aa		13.6	□□□□□ -0.23
GFAP-238	ENST00000640859	NMI	Q13287	307 aa	Predicted RBP	13.6	□□□□□ -0.23
GFAP-238	ENST00000640859	R3HDM1	Q15032	1099 aa	Known RBP	13.6	□□□□□ -0.23
GFAP-238	ENST00000640859	KIAA1211	Q6ZU35	1233 aa		13.6	□□□□□ -0.23
GFAP-238	ENST00000640859	NLRP10	Q86W26	655 aa		13.6	□□□□□ -0.23
GFAP-238	ENST00000640859	DBNDD2	Q9BQY9	259 aa		13.6	□□□□□ -0.23
GFAP-238	ENST00000640859	CWC22	Q9HCG8	908 aa	Known RBP	13.6	□□□□□ -0.23
GFAP-238	ENST00000640859	FBXO3	Q9UK99	471 aa		13.6	□□□□□ -0.23
GFAP-238	ENST00000640859	SNX14	Q9Y5W7	946 aa		13.6	□□□□□ -0.23
GFAP-238	ENST00000640859	PTH1R	Q03431	593 aa		13.59	□□□□□ -0.23
GFAP-238	ENST00000640859	INTS5	Q6P9B9	1019 aa	Known RBP	13.59	□□□□□ -0.23
GFAP-238	ENST00000640859	TNPO1	Q92973	898 aa	Known RBP	13.59	□□□□□ -0.23
GFAP-238	ENST00000640859	ZNF594	Q96JF6	807 aa	Predicted RBP	13.59	□□□□□ -0.23
GFAP-238	ENST00000640859	HAUS7	Q99871	368 aa		13.59	□□□□□ -0.23
GFAP-238	ENST00000640859	CCDC87	Q9NVE4	849 aa		13.59	□□□□□ -0.23
GFAP-238	ENST00000640859	CNTNAP4	Q9C0A0	1308 aa		13.59	□□□□□ -0.23
GFAP-238	ENST00000640859	RFX7	Q2KHR2	1363 aa		13.58	□□□□□ -0.23
GFAP-238	ENST00000640859	SSFA2	P28290	1259 aa		13.58	□□□□□ -0.24
GFAP-238	ENST00000640859	CRKL	P46109	303 aa	Known RBP	13.58	□□□□□ -0.24
GFAP-238	ENST00000640859	EIF5	P55010	431 aa	Known RBP	13.58	□□□□□ -0.24
GFAP-238	ENST00000640859	ITPK1	Q13572	414 aa		13.58	□□□□□ -0.24

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