RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 DPP8Q6V1X1 898 aaPredicted RBP32.38■■■□□ 2.77
VEGFA-232ENST00000640653 CWC25Q9NXE8 425 aaPredicted RBP32.38■■■□□ 2.77
VEGFA-232ENST00000640653 MAP3K2Q9Y2U5 619 aa32.38■■■□□ 2.77
VEGFA-232ENST00000640653 KSR2Q6VAB6 950 aa32.37■■■□□ 2.77
VEGFA-232ENST00000640653 GPC2Q8N158 579 aa32.37■■■□□ 2.77
VEGFA-232ENST00000640653 PPIP5K2O43314 1243 aa32.36■■■□□ 2.77
VEGFA-232ENST00000640653 NIM1KQ8IY84 436 aa32.36■■■□□ 2.77
VEGFA-232ENST00000640653 MPNDQ8N594 471 aa32.36■■■□□ 2.77
VEGFA-232ENST00000640653 RTFDC1Q9BY42 306 aaPredicted RBP32.36■■■□□ 2.77
VEGFA-232ENST00000640653 SCN4AP35499 1836 aa32.35■■■□□ 2.77
VEGFA-232ENST00000640653 PCCAP05165 728 aaPredicted RBP32.35■■■□□ 2.77
VEGFA-232ENST00000640653 COL4A5P29400 1685 aa32.34■■■□□ 2.77
VEGFA-232ENST00000640653 PI4KAP2A4QPH2 592 aa32.34■■■□□ 2.77
VEGFA-232ENST00000640653 SLC4A2P04920 1241 aa32.34■■■□□ 2.77
VEGFA-232ENST00000640653 PI4KAP1Q8N8J0 262 aa32.34■■■□□ 2.77
VEGFA-232ENST00000640653 TAF1DQ9H5J8 278 aaPredicted RBP32.34■■■□□ 2.77
VEGFA-232ENST00000640653 HACL1Q9UJ83 578 aa32.34■■■□□ 2.77
VEGFA-232ENST00000640653 NEXNQ0ZGT2 675 aa32.33■■■□□ 2.77
VEGFA-232ENST00000640653 AOC3Q16853 763 aa32.33■■■□□ 2.77
VEGFA-232ENST00000640653 CHADLQ6NUI6 762 aa32.33■■■□□ 2.77
VEGFA-232ENST00000640653 CELF1Q92879 486 aaKnown RBP32.31■■■□□ 2.76
VEGFA-232ENST00000640653 MYH16Q9H6N6 1097 aa32.31■■■□□ 2.76
VEGFA-232ENST00000640653 GJA3Q9Y6H8 435 aa32.31■■■□□ 2.76
VEGFA-232ENST00000640653 LDHDQ86WU2 507 aa32.3■■■□□ 2.76
VEGFA-232ENST00000640653 PDE8AO60658 829 aa32.29■■■□□ 2.76
VEGFA-232ENST00000640653 VAMP4O75379 141 aa32.29■■■□□ 2.76
VEGFA-232ENST00000640653 POTEIP0CG38 1075 aa32.29■■■□□ 2.76
VEGFA-232ENST00000640653 POTEJP0CG39 1038 aa32.29■■■□□ 2.76
VEGFA-232ENST00000640653 EXOSC9Q06265 439 aaKnown RBP32.29■■■□□ 2.76
VEGFA-232ENST00000640653 G2E3Q7L622 706 aa32.29■■■□□ 2.76
VEGFA-232ENST00000640653 DNAJC5GQ8N7S2 189 aa32.29■■■□□ 2.76
VEGFA-232ENST00000640653 IGKV5-2P06315 115 aa32.28■■■□□ 2.76
VEGFA-232ENST00000640653 EPHX2P34913 555 aa32.28■■■□□ 2.76
VEGFA-232ENST00000640653 HTRA3P83110 453 aa32.28■■■□□ 2.76
VEGFA-232ENST00000640653 CCDC152Q4G0S7 254 aa32.28■■■□□ 2.76
VEGFA-232ENST00000640653 TAF1P21675 1872 aa32.28■■■□□ 2.76
VEGFA-232ENST00000640653 LRRC37AA6NMS7 1700 aa32.27■■■□□ 2.76
VEGFA-232ENST00000640653 KIAA2012Q0VF49 1180 aa32.27■■■□□ 2.76
VEGFA-232ENST00000640653 FLIIQ13045 1269 aa32.27■■■□□ 2.76
VEGFA-232ENST00000640653 EAPPQ56P03 285 aaPredicted RBP32.27■■■□□ 2.76
VEGFA-232ENST00000640653 PNMA8AQ86V59 439 aaPredicted RBP32.27■■■□□ 2.76
VEGFA-232ENST00000640653 CDHR2Q9BYE9 1310 aa32.26■■■□□ 2.76
VEGFA-232ENST00000640653 LMOD1P29536 600 aaPredicted RBP32.26■■■□□ 2.75
VEGFA-232ENST00000640653 RPS8P62241 208 aaKnown RBP32.26■■■□□ 2.75
VEGFA-232ENST00000640653 JARID2Q92833 1246 aaPredicted RBP32.26■■■□□ 2.75
VEGFA-232ENST00000640653 SPINK5Q9NQ38 1064 aaPredicted RBP32.26■■■□□ 2.75
VEGFA-232ENST00000640653 ZNRF3Q9ULT6 936 aa32.26■■■□□ 2.75
VEGFA-232ENST00000640653 FKBP5Q13451 457 aaPredicted RBP32.24■■■□□ 2.75
VEGFA-232ENST00000640653 NSFL1CQ9UNZ2 370 aaKnown RBP32.24■■■□□ 2.75
VEGFA-232ENST00000640653 NEURL1BA8MQ27 555 aa32.23■■■□□ 2.75
VEGFA-232ENST00000640653 CWF19L2Q2TBE0 894 aaKnown RBP32.22■■■□□ 2.75
VEGFA-232ENST00000640653 KLRG1Q96E93 195 aa32.22■■■□□ 2.75
VEGFA-232ENST00000640653 SEC31BQ9NQW1 1179 aa32.22■■■□□ 2.75
VEGFA-232ENST00000640653 CLEC11AQ9Y240 323 aa32.22■■■□□ 2.75
VEGFA-232ENST00000640653 DUOX1Q9NRD9 1551 aa32.22■■■□□ 2.75
VEGFA-232ENST00000640653 SCNN1DP51172 638 aa32.2■■■□□ 2.75
VEGFA-232ENST00000640653 GPSM2P81274 684 aa32.2■■■□□ 2.75
VEGFA-232ENST00000640653 DNAAF4Q8WXU2 420 aa32.2■■■□□ 2.75
VEGFA-232ENST00000640653 COL4A1P02462 1669 aa32.19■■■□□ 2.74
VEGFA-232ENST00000640653 C6orf229H3BNL8 230 aa32.19■■■□□ 2.74
VEGFA-232ENST00000640653 CTSWP56202 376 aa32.19■■■□□ 2.74
VEGFA-232ENST00000640653 CXCL9Q07325 125 aa32.19■■■□□ 2.74
VEGFA-232ENST00000640653 WASHC4Q2M389 1173 aa32.19■■■□□ 2.74
VEGFA-232ENST00000640653 CCDC85AQ96PX6 553 aaPredicted RBP32.19■■■□□ 2.74
VEGFA-232ENST00000640653 CACNA1FO60840 1977 aa32.18■■■□□ 2.74
VEGFA-232ENST00000640653 CIAPIN1Q6FI81 312 aa32.18■■■□□ 2.74
VEGFA-232ENST00000640653 EYA3Q99504 573 aa32.18■■■□□ 2.74
VEGFA-232ENST00000640653 ZNF521Q96K83 1311 aa32.18■■■□□ 2.74
VEGFA-232ENST00000640653 TNIP1Q15025 636 aa32.17■■■□□ 2.74
VEGFA-232ENST00000640653 GCKRQ14397 625 aa32.16■■■□□ 2.74
VEGFA-232ENST00000640653 ANKRD18AQ8IVF6 992 aa32.16■■■□□ 2.74
VEGFA-232ENST00000640653 LINS1Q8NG48 757 aa32.16■■■□□ 2.74
VEGFA-232ENST00000640653 POLLQ9UGP5 575 aa32.16■■■□□ 2.74
VEGFA-232ENST00000640653 ADAMTSL1Q8N6G6 1762 aa32.16■■■□□ 2.74
VEGFA-232ENST00000640653 H7C1W4 665 aa32.15■■■□□ 2.74
VEGFA-232ENST00000640653 EPS15P42566 896 aa32.15■■■□□ 2.74
VEGFA-232ENST00000640653 UBE3BQ7Z3V4 1068 aa32.15■■■□□ 2.74
VEGFA-232ENST00000640653 CDC5LQ99459 802 aaKnown RBP32.15■■■□□ 2.74
VEGFA-232ENST00000640653 PODXL2Q9NZ53 605 aa32.15■■■□□ 2.74
VEGFA-232ENST00000640653 LTBP1Q14766 1721 aa32.14■■■□□ 2.74
VEGFA-232ENST00000640653 TTLL11Q8NHH1 800 aa32.14■■■□□ 2.74
VEGFA-232ENST00000640653 TBC1D16Q8TBP0 767 aa32.14■■■□□ 2.74
VEGFA-232ENST00000640653 CREBZFQ9NS37 354 aa32.14■■■□□ 2.74
VEGFA-232ENST00000640653 ANKIB1Q9P2G1 1089 aa32.14■■■□□ 2.74
VEGFA-232ENST00000640653 RAD17O75943 681 aa32.13■■■□□ 2.73
VEGFA-232ENST00000640653 USP50Q70EL3 339 aaPredicted RBP32.13■■■□□ 2.73
VEGFA-232ENST00000640653 PASKQ96RG2 1323 aa32.13■■■□□ 2.73
VEGFA-232ENST00000640653 GPRC5DQ9NZD1 345 aa32.13■■■□□ 2.73
VEGFA-232ENST00000640653 RIMBP2O15034 1052 aa32.12■■■□□ 2.73
VEGFA-232ENST00000640653 RTL9Q8NET4 1388 aa32.11■■■□□ 2.73
VEGFA-232ENST00000640653 YDJCA8MPS7 323 aa32.11■■■□□ 2.73
VEGFA-232ENST00000640653 ITGBL1O95965 494 aaPredicted RBP32.11■■■□□ 2.73
VEGFA-232ENST00000640653 GMPSP49915 693 aaPredicted RBP32.11■■■□□ 2.73
VEGFA-232ENST00000640653 BCL2L13Q9BXK5 485 aa32.11■■■□□ 2.73
VEGFA-232ENST00000640653 ADARB2Q9NS39 739 aaKnown RBP32.11■■■□□ 2.73
VEGFA-232ENST00000640653 GGA1Q9UJY5 639 aa32.11■■■□□ 2.73
VEGFA-232ENST00000640653 UFL1O94874 794 aa32.1■■■□□ 2.73
VEGFA-232ENST00000640653 MAP1SQ66K74 1059 aaPredicted RBP32.1■■■□□ 2.73
VEGFA-232ENST00000640653 CNTROBQ8N137 903 aa32.1■■■□□ 2.73
VEGFA-232ENST00000640653 JMYQ8N9B5 988 aa32.1■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms