RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 FOXO3O43524 673 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 SMC2O95347 1197 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 ZNF165P49910 485 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 MPRIPQ6WCQ1 1025 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 SMTNL1A8MU46 457 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 AKAP17AQ02040 695 aaKnown RBP6.51□□□□□ -1.37
SCN3A-210ENST00000640652 DNM1Q05193 864 aaKnown RBP6.51□□□□□ -1.37
SCN3A-210ENST00000640652 STK3Q13188 491 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 IMMTQ16891 758 aaKnown RBP6.51□□□□□ -1.37
SCN3A-210ENST00000640652 GAS2L3Q86XJ1 694 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 GOLGA6L1Q8N7Z2 621 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 LLPHQ9BRT6 129 aaKnown RBP6.51□□□□□ -1.37
SCN3A-210ENST00000640652 AKAP2Q9Y2D5 859 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 KDM4AO75164 1064 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 PHRF1Q9P1Y6 1649 aaKnown RBP6.51□□□□□ -1.37
SCN3A-210ENST00000640652 CREB3L3Q68CJ9 461 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 MYRIPQ8NFW9 859 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 ERICH2A1L162 156 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 TUBB4AP04350 444 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 G2E3Q7L622 706 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 TBC1D2BQ9UPU7 963 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 ZNF330Q9Y3S2 320 aaPredicted RBP6.51□□□□□ -1.37
SCN3A-210ENST00000640652 NWD1Q149M9 1564 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 APPP05067 770 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 XBP1P17861 261 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 NFXL1Q6ZNB6 911 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 BOLA2Q9H3K6 86 aa6.51□□□□□ -1.37
SCN3A-210ENST00000640652 RBM8AQ9Y5S9 174 aaKnown RBP6.51□□□□□ -1.37
SCN3A-210ENST00000640652 BRMS1Q9HCU9 246 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 DACH1Q9UI36 760 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 USHBP1Q8N6Y0 703 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 C16orf45Q96MC5 204 aaPredicted RBP6.5□□□□□ -1.37
SCN3A-210ENST00000640652 CCDC57Q2TAC2 916 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 ANO6Q4KMQ2 910 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 AKAP11Q9UKA4 1901 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 UBE3BQ7Z3V4 1068 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 WASF1Q92558 559 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 NCKAP5LQ9HCH0 1330 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 PTPN14Q15678 1187 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 TSR1Q2NL82 804 aaKnown RBP6.5□□□□□ -1.37
SCN3A-210ENST00000640652 GIMAP6Q6P9H5 292 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 FERMT3Q86UX7 667 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 CABP4P57796 275 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 CEBPZQ03701 1054 aaKnown RBP6.5□□□□□ -1.37
SCN3A-210ENST00000640652 WASHC4Q2M389 1173 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 TTC39AQ5SRH9 613 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 CKAP2LQ8IYA6 745 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 CCDC150Q8NCX0 1101 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 CCDC9Q9Y3X0 531 aaKnown RBP6.5□□□□□ -1.37
SCN3A-210ENST00000640652 RFX7Q2KHR2 1363 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 MNS1Q8NEH6 495 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 KCNG4Q8TDN1 519 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 NEK1Q96PY6 1258 aa6.5□□□□□ -1.37
SCN3A-210ENST00000640652 TRIM22Q8IYM9 498 aa6.49□□□□□ -1.37
SCN3A-210ENST00000640652 TAOK2Q9UL54 1235 aa6.49□□□□□ -1.37
SCN3A-210ENST00000640652 CYP2E1P05181 493 aaPredicted RBP6.49□□□□□ -1.37
SCN3A-210ENST00000640652 MCMDC2Q4G0Z9 681 aa6.49□□□□□ -1.37
SCN3A-210ENST00000640652 NOL10Q9BSC4 688 aaKnown RBP6.49□□□□□ -1.37
SCN3A-210ENST00000640652 SNX14Q9Y5W7 946 aa6.49□□□□□ -1.37
SCN3A-210ENST00000640652 TICAM2Q86XR7 235 aa6.49□□□□□ -1.37
SCN3A-210ENST00000640652 PDLIM2Q96JY6 352 aa6.49□□□□□ -1.37
SCN3A-210ENST00000640652 TRHP20396 242 aaPredicted RBP6.49□□□□□ -1.37
SCN3A-210ENST00000640652 RPS6KB1P23443 525 aa6.49□□□□□ -1.37
SCN3A-210ENST00000640652 FMNL2Q96PY5 1086 aa6.49□□□□□ -1.37
SCN3A-210ENST00000640652 BICC1Q9H694 974 aaKnown RBP6.49□□□□□ -1.37
SCN3A-210ENST00000640652 NMIQ13287 307 aaPredicted RBP6.49□□□□□ -1.37
SCN3A-210ENST00000640652 POLA2Q14181 598 aa6.49□□□□□ -1.37
SCN3A-210ENST00000640652 C8orf76Q96K31 380 aa6.49□□□□□ -1.37
SCN3A-210ENST00000640652 SNRPA1P09661 255 aaKnown RBP6.49□□□□□ -1.37
SCN3A-210ENST00000640652 PIP4K2AP48426 406 aaPredicted RBP6.49□□□□□ -1.37
SCN3A-210ENST00000640652 CCDC70Q6NSX1 233 aa6.49□□□□□ -1.37
SCN3A-210ENST00000640652 ERBB4Q15303 1308 aa6.49□□□□□ -1.37
SCN3A-210ENST00000640652 LSG1Q9H089 658 aaKnown RBP6.49□□□□□ -1.37
SCN3A-210ENST00000640652 PRR36Q9H6K5 1346 aa6.48□□□□□ -1.37
SCN3A-210ENST00000640652 GOLGA6L9A6NEM1 432 aa6.48□□□□□ -1.37
SCN3A-210ENST00000640652 FOSBP53539 338 aa6.48□□□□□ -1.37
SCN3A-210ENST00000640652 A0A0G2JS52 829 aa6.48□□□□□ -1.37
SCN3A-210ENST00000640652 GTF3C6Q969F1 213 aa6.48□□□□□ -1.37
SCN3A-210ENST00000640652 ZFYP08048 801 aaPredicted RBP6.48□□□□□ -1.37
SCN3A-210ENST00000640652 ANKRD13DQ6ZTN6 518 aa6.48□□□□□ -1.37
SCN3A-210ENST00000640652 PALD1Q9ULE6 856 aa6.48□□□□□ -1.37
SCN3A-210ENST00000640652 GOLGA8BA8MQT2 603 aa6.48□□□□□ -1.37
SCN3A-210ENST00000640652 TTF1Q15361 905 aaPredicted RBP6.48□□□□□ -1.37
SCN3A-210ENST00000640652 ANKRD24Q8TF21 1146 aa6.48□□□□□ -1.37
SCN3A-210ENST00000640652 CWC25Q9NXE8 425 aaPredicted RBP6.48□□□□□ -1.37
SCN3A-210ENST00000640652 ZSCAN12O43309 604 aa6.48□□□□□ -1.37
SCN3A-210ENST00000640652 PPP4R3BQ5MIZ7 849 aa6.48□□□□□ -1.37
SCN3A-210ENST00000640652 NUP188Q5SRE5 1749 aa6.48□□□□□ -1.37
SCN3A-210ENST00000640652 IPO7O95373 1038 aaKnown RBP6.48□□□□□ -1.37
SCN3A-210ENST00000640652 BRAPQ7Z569 592 aa6.48□□□□□ -1.37
SCN3A-210ENST00000640652 NACAP1Q9BZK3 213 aa6.48□□□□□ -1.37
SCN3A-210ENST00000640652 PHAXQ9H814 394 aaKnown RBP6.48□□□□□ -1.37
SCN3A-210ENST00000640652 CWC15Q9P013 229 aaKnown RBP6.48□□□□□ -1.37
SCN3A-210ENST00000640652 ADCY9O60503 1353 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 SLC27A2O14975 620 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 NBPF7P0C2Y1 421 aaPredicted RBP6.47□□□□□ -1.37
SCN3A-210ENST00000640652 ZSWIM6Q9HCJ5 1215 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 CEP126Q9P2H0 1117 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 ADAMTS13Q76LX8 1427 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 USP42Q9H9J4 1324 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms