RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 C20orf194Q5TEA3 1177 aa19.11■□□□□ 0.65
PAX6-268ENST00000640287 TTLL6Q8N841 843 aa19.11■□□□□ 0.65
PAX6-268ENST00000640287 CNKSR1Q969H4 720 aa19.11■□□□□ 0.65
PAX6-268ENST00000640287 SUCLG2Q96I99 432 aa19.11■□□□□ 0.65
PAX6-268ENST00000640287 PLA2G12BQ9BX93 195 aa19.11■□□□□ 0.65
PAX6-268ENST00000640287 HDAC5Q9UQL6 1122 aa19.11■□□□□ 0.65
PAX6-268ENST00000640287 BCS1LQ9Y276 419 aa19.11■□□□□ 0.65
PAX6-268ENST00000640287 COG6Q9Y2V7 657 aa19.11■□□□□ 0.65
PAX6-268ENST00000640287 SUPT16HQ9Y5B9 1047 aaKnown RBP19.11■□□□□ 0.65
PAX6-268ENST00000640287 GOLGB1Q14789 3259 aaKnown RBP19.11■□□□□ 0.65
PAX6-268ENST00000640287 KIAA1551Q9HCM1 1747 aa19.11■□□□□ 0.65
PAX6-268ENST00000640287 ALDH1B1P30837 517 aa19.1■□□□□ 0.65
PAX6-268ENST00000640287 SF3B3Q15393 1217 aaKnown RBP19.1■□□□□ 0.65
PAX6-268ENST00000640287 CENPBP07199 599 aaPredicted RBP19.09■□□□□ 0.65
PAX6-268ENST00000640287 MVPQ14764 893 aaKnown RBP19.09■□□□□ 0.65
PAX6-268ENST00000640287 HOXA10P31260 410 aaPredicted RBP19.09■□□□□ 0.65
PAX6-268ENST00000640287 EPHA10Q5JZY3 1008 aa19.09■□□□□ 0.65
PAX6-268ENST00000640287 TTLL11Q8NHH1 800 aa19.09■□□□□ 0.65
PAX6-268ENST00000640287 DDX19BQ9UMR2 479 aa19.09■□□□□ 0.65
PAX6-268ENST00000640287 DLEC1Q9Y238 1755 aa19.08■□□□□ 0.65
PAX6-268ENST00000640287 FOXO4P98177 505 aa19.08■□□□□ 0.64
PAX6-268ENST00000640287 GPR162Q16538 588 aa19.08■□□□□ 0.64
PAX6-268ENST00000640287 PRPF40BQ6NWY9 871 aaKnown RBP19.08■□□□□ 0.64
PAX6-268ENST00000640287 LMBR1LQ6UX01 489 aa19.08■□□□□ 0.64
PAX6-268ENST00000640287 CRAMP1Q96RY5 1269 aa19.08■□□□□ 0.64
PAX6-268ENST00000640287 BICC1Q9H694 974 aaKnown RBP19.08■□□□□ 0.64
PAX6-268ENST00000640287 GREM2Q9H772 168 aa19.08■□□□□ 0.64
PAX6-268ENST00000640287 ZNF219Q9P2Y4 722 aaPredicted RBP19.08■□□□□ 0.64
PAX6-268ENST00000640287 LRRFIP2Q9Y608 721 aaKnown RBP19.08■□□□□ 0.64
PAX6-268ENST00000640287 DCAF8L1A6NGE4 600 aa19.07■□□□□ 0.64
PAX6-268ENST00000640287 GRAPQ13588 217 aa19.07■□□□□ 0.64
PAX6-268ENST00000640287 FAM161AQ3B820 660 aa19.07■□□□□ 0.64
PAX6-268ENST00000640287 GRAPLQ8TC17 118 aaPredicted RBP19.07■□□□□ 0.64
PAX6-268ENST00000640287 GNAI2P04899 355 aa19.06■□□□□ 0.64
PAX6-268ENST00000640287 KAZALD1Q96I82 304 aa19.06■□□□□ 0.64
PAX6-268ENST00000640287 CHMP4BQ9H444 224 aaKnown RBP19.06■□□□□ 0.64
PAX6-268ENST00000640287 SEC31BQ9NQW1 1179 aa19.06■□□□□ 0.64
PAX6-268ENST00000640287 PPEF1O14829 653 aaPredicted RBP19.05■□□□□ 0.64
PAX6-268ENST00000640287 ZBTB7BO15156 539 aaPredicted RBP19.05■□□□□ 0.64
PAX6-268ENST00000640287 CSF1RP07333 972 aa19.05■□□□□ 0.64
PAX6-268ENST00000640287 ITGA6P23229 1130 aa19.05■□□□□ 0.64
PAX6-268ENST00000640287 IFIT5Q13325 482 aaKnown RBP19.05■□□□□ 0.64
PAX6-268ENST00000640287 TMX4Q9H1E5 349 aaPredicted RBP19.05■□□□□ 0.64
PAX6-268ENST00000640287 MYH3P11055 1940 aa19.05■□□□□ 0.64
PAX6-268ENST00000640287 ANKRD18BA2A2Z9 1011 aa19.04■□□□□ 0.64
PAX6-268ENST00000640287 CCDC57Q2TAC2 916 aa19.04■□□□□ 0.64
PAX6-268ENST00000640287 CELF1Q92879 486 aaKnown RBP19.04■□□□□ 0.64
PAX6-268ENST00000640287 CDC5LQ99459 802 aaKnown RBP19.04■□□□□ 0.64
PAX6-268ENST00000640287 C1orf115Q9H7X2 142 aa19.04■□□□□ 0.64
PAX6-268ENST00000640287 RTL9Q8NET4 1388 aa19.04■□□□□ 0.64
PAX6-268ENST00000640287 C21orf2O43822 256 aa19.03■□□□□ 0.64
PAX6-268ENST00000640287 TAF7LQ5H9L4 462 aa19.03■□□□□ 0.64
PAX6-268ENST00000640287 ANKRD18AQ8IVF6 992 aa19.03■□□□□ 0.64
PAX6-268ENST00000640287 ANKRD44Q8N8A2 993 aa19.03■□□□□ 0.64
PAX6-268ENST00000640287 BRCA1P38398 1863 aaKnown RBP19.03■□□□□ 0.64
PAX6-268ENST00000640287 CACNA1SQ13698 1873 aa19.03■□□□□ 0.64
PAX6-268ENST00000640287 BBOX1O75936 387 aa19.03■□□□□ 0.64
PAX6-268ENST00000640287 YBX3P16989 372 aaKnown RBP eCLIP19.03■□□□□ 0.64
PAX6-268ENST00000640287 IGHMBP2P38935 993 aaKnown RBP19.03■□□□□ 0.64
PAX6-268ENST00000640287 RPS8P62241 208 aaKnown RBP19.03■□□□□ 0.64
PAX6-268ENST00000640287 RABL6Q3YEC7 729 aaPredicted RBP19.02■□□□□ 0.63
PAX6-268ENST00000640287 UTRNP46939 3433 aa19.01■□□□□ 0.63
PAX6-268ENST00000640287 MPHOSPH8Q99549 860 aa19.01■□□□□ 0.63
PAX6-268ENST00000640287 SOGA3Q5TF21 947 aa19■□□□□ 0.63
PAX6-268ENST00000640287 TMC4Q7Z404 712 aa19■□□□□ 0.63
PAX6-268ENST00000640287 CRBNQ96SW2 442 aa19■□□□□ 0.63
PAX6-268ENST00000640287 SLX4Q8IY92 1834 aa19■□□□□ 0.63
PAX6-268ENST00000640287 SRGAP3O43295 1099 aa18.99■□□□□ 0.63
PAX6-268ENST00000640287 GRIN3BO60391 1043 aa18.99■□□□□ 0.63
PAX6-268ENST00000640287 OLFM4Q6UX06 510 aa18.99■□□□□ 0.63
PAX6-268ENST00000640287 ATP6V0A2Q9Y487 856 aa18.99■□□□□ 0.63
PAX6-268ENST00000640287 TAF1P21675 1872 aa18.99■□□□□ 0.63
PAX6-268ENST00000640287 CCDC93Q567U6 631 aa18.98■□□□□ 0.63
PAX6-268ENST00000640287 ARHGAP27Q6ZUM4 889 aa18.98■□□□□ 0.63
PAX6-268ENST00000640287 ZNF594Q96JF6 807 aaPredicted RBP18.98■□□□□ 0.63
PAX6-268ENST00000640287 ZBTB40Q9NUA8 1239 aa18.98■□□□□ 0.63
PAX6-268ENST00000640287 COL4A1P02462 1669 aa18.98■□□□□ 0.63
PAX6-268ENST00000640287 SP8Q8IXZ3 490 aa18.97■□□□□ 0.63
PAX6-268ENST00000640287 C7orf43Q8WVR3 580 aa18.97■□□□□ 0.63
PAX6-268ENST00000640287 CNNM1Q9NRU3 951 aa18.97■□□□□ 0.63
PAX6-268ENST00000640287 IRX6P78412 446 aaPredicted RBP18.97■□□□□ 0.63
PAX6-268ENST00000640287 CC2D2BQ6DHV5 1058 aa18.97■□□□□ 0.63
PAX6-268ENST00000640287 SLC51AQ86UW1 340 aa18.97■□□□□ 0.63
PAX6-268ENST00000640287 BSDC1Q9NW68 430 aaPredicted RBP18.97■□□□□ 0.63
PAX6-268ENST00000640287 ARFGEF1Q9Y6D6 1849 aa18.96■□□□□ 0.63
PAX6-268ENST00000640287 LDHAL6AQ6ZMR3 332 aa18.96■□□□□ 0.63
PAX6-268ENST00000640287 RTKN2Q8IZC4 609 aa18.96■□□□□ 0.63
PAX6-268ENST00000640287 KLHDC4Q8TBB5 520 aa18.96■□□□□ 0.63
PAX6-268ENST00000640287 MTX1Q13505 466 aa18.95■□□□□ 0.62
PAX6-268ENST00000640287 ANKIB1Q9P2G1 1089 aa18.95■□□□□ 0.62
PAX6-268ENST00000640287 NSFL1CQ9UNZ2 370 aaKnown RBP18.95■□□□□ 0.62
PAX6-268ENST00000640287 PNMA6EA0A0J9YXQ4 647 aa18.94■□□□□ 0.62
PAX6-268ENST00000640287 CEP85Q6P2H3 762 aa18.94■□□□□ 0.62
PAX6-268ENST00000640287 DPP8Q6V1X1 898 aaPredicted RBP18.94■□□□□ 0.62
PAX6-268ENST00000640287 MPNDQ8N594 471 aa18.94■□□□□ 0.62
PAX6-268ENST00000640287 SIL1Q9H173 461 aa18.94■□□□□ 0.62
PAX6-268ENST00000640287 SPEF2Q9C093 1822 aa18.94■□□□□ 0.62
PAX6-268ENST00000640287 RFX5P48382 616 aaPredicted RBP18.93■□□□□ 0.62
PAX6-268ENST00000640287 ATP8B2P98198 1209 aa18.93■□□□□ 0.62
PAX6-268ENST00000640287 GRIPAP1Q4V328 841 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms