RNA–Protein interactions for RNA: ENST00000640099.1

NECAP1-224, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,313 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-224ENST00000640099 ZSCAN30Q86W11 494 aa9.15□□□□□ -0.94
NECAP1-224ENST00000640099 CAMK4Q16566 473 aa9.15□□□□□ -0.95
NECAP1-224ENST00000640099 CHST3Q7LGC8 479 aa9.15□□□□□ -0.95
NECAP1-224ENST00000640099 PUS3Q9BZE2 481 aaKnown RBP9.15□□□□□ -0.95
NECAP1-224ENST00000640099 USP25Q9UHP3 1055 aa9.15□□□□□ -0.95
NECAP1-224ENST00000640099 CEBPZQ03701 1054 aaKnown RBP9.14□□□□□ -0.95
NECAP1-224ENST00000640099 CADPS2Q86UW7 1296 aa9.14□□□□□ -0.95
NECAP1-224ENST00000640099 ZCRB1Q8TBF4 217 aaKnown RBP9.14□□□□□ -0.95
NECAP1-224ENST00000640099 SYAP1Q96A49 352 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-224ENST00000640099 MST1RQ04912 1400 aa9.14□□□□□ -0.95
NECAP1-224ENST00000640099 USP54Q70EL1 1684 aa9.14□□□□□ -0.95
NECAP1-224ENST00000640099 COL15A1P39059 1388 aa9.14□□□□□ -0.95
NECAP1-224ENST00000640099 TCHHQ07283 1943 aa9.14□□□□□ -0.95
NECAP1-224ENST00000640099 TAF5LO75529 589 aa9.14□□□□□ -0.95
NECAP1-224ENST00000640099 EVA1CP58658 441 aa9.13□□□□□ -0.95
NECAP1-224ENST00000640099 RNF20Q5VTR2 975 aa9.13□□□□□ -0.95
NECAP1-224ENST00000640099 SYNE4Q8N205 404 aa9.13□□□□□ -0.95
NECAP1-224ENST00000640099 COPRSQ9NQ92 184 aa9.13□□□□□ -0.95
NECAP1-224ENST00000640099 HIP1O00291 1037 aa9.13□□□□□ -0.95
NECAP1-224ENST00000640099 RPS6KB1P23443 525 aa9.13□□□□□ -0.95
NECAP1-224ENST00000640099 PSMA5P28066 241 aa9.13□□□□□ -0.95
NECAP1-224ENST00000640099 TOB2Q14106 344 aaPredicted RBP9.13□□□□□ -0.95
NECAP1-224ENST00000640099 POTEDQ86YR6 584 aa9.13□□□□□ -0.95
NECAP1-224ENST00000640099 PLBD2Q8NHP8 589 aa9.13□□□□□ -0.95
NECAP1-224ENST00000640099 SPATA31A3Q5VYP0 1347 aa9.13□□□□□ -0.95
NECAP1-224ENST00000640099 FKBP4Q02790 459 aaKnown RBP eCLIP9.13□□□□□ -0.95
NECAP1-224ENST00000640099 BRINP3Q76B58 766 aa9.13□□□□□ -0.95
NECAP1-224ENST00000640099 IL17RAQ96F46 866 aa9.13□□□□□ -0.95
NECAP1-224ENST00000640099 GPTP24298 496 aa9.12□□□□□ -0.95
NECAP1-224ENST00000640099 Q6ZUG5 572 aa9.12□□□□□ -0.95
NECAP1-224ENST00000640099 RAB11FIP4Q86YS3 637 aa9.12□□□□□ -0.95
NECAP1-224ENST00000640099 BRF1Q92994 677 aa9.12□□□□□ -0.95
NECAP1-224ENST00000640099 ZSCAN31Q96LW9 406 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-224ENST00000640099 EPB41L2O43491 1005 aaKnown RBP9.12□□□□□ -0.95
NECAP1-224ENST00000640099 CYP21A2P08686 494 aa9.12□□□□□ -0.95
NECAP1-224ENST00000640099 ATP5JP18859 108 aa9.12□□□□□ -0.95
NECAP1-224ENST00000640099 UBE2HP62256 183 aa9.12□□□□□ -0.95
NECAP1-224ENST00000640099 CCT2P78371 535 aaKnown RBP9.12□□□□□ -0.95
NECAP1-224ENST00000640099 FOXO4P98177 505 aa9.12□□□□□ -0.95
NECAP1-224ENST00000640099 CCDC183Q5T5S1 534 aa9.12□□□□□ -0.95
NECAP1-224ENST00000640099 FAM89AQ96GI7 184 aa9.12□□□□□ -0.95
NECAP1-224ENST00000640099 TM6SF1Q9BZW5 370 aa9.12□□□□□ -0.95
NECAP1-224ENST00000640099 SH2B1Q9NRF2 756 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-224ENST00000640099 CWC25Q9NXE8 425 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-224ENST00000640099 R3HCC1Q9Y3T6 440 aaKnown RBP9.12□□□□□ -0.95
NECAP1-224ENST00000640099 GUCY1B3Q02153 619 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 TTC6Q86TZ1 520 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 CKAP2LQ8IYA6 745 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 C17orf53Q8N3J3 647 aaPredicted RBP9.11□□□□□ -0.95
NECAP1-224ENST00000640099 SYTL4Q96C24 671 aaPredicted RBP9.11□□□□□ -0.95
NECAP1-224ENST00000640099 NEK1Q96PY6 1258 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.11□□□□□ -0.95
NECAP1-224ENST00000640099 C5P01031 1676 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 ZNF609O15014 1411 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 KAT6BQ8WYB5 2073 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 HAND2P61296 217 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 GORABQ5T7V8 394 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 TTLL5Q6EMB2 1281 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.11□□□□□ -0.95
NECAP1-224ENST00000640099 KDM4AO75164 1064 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 LIG1P18858 919 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 CASP7P55210 303 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 PI16Q6UXB8 463 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 ATG9AQ7Z3C6 839 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 PDLIM2Q96JY6 352 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 NCOA5Q9HCD5 579 aaKnown RBP9.11□□□□□ -0.95
NECAP1-224ENST00000640099 ATP6V1DQ9Y5K8 247 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 MED23Q9ULK4 1368 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 OVOS2A0A0G2JMS6 1433 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 TNS3Q68CZ2 1445 aa9.11□□□□□ -0.95
NECAP1-224ENST00000640099 TRPM3Q9HCF6 1732 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-224ENST00000640099 N4BP2Q86UW6 1770 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-224ENST00000640099 FAM177BA6PVY3 158 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 PHF14O94880 888 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 ADORA1P30542 326 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 MCMDC2Q4G0Z9 681 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 STOX1Q6ZVD7 989 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 ASAP1Q9ULH1 1129 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 A0A1B0GUL7 405 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 GOLGA6L4A6NEF3 574 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 IFIT1P09914 478 aaKnown RBP9.1□□□□□ -0.95
NECAP1-224ENST00000640099 APOBRQ0VD83 1088 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 RABL6Q3YEC7 729 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-224ENST00000640099 TAF7LQ5H9L4 462 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 KCNB2Q92953 911 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 GPHNQ9NQX3 736 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-224ENST00000640099 PAG1Q9NWQ8 432 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 H3BQV1 296 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 WASHC4Q2M389 1173 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 IFFO2Q5TF58 517 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 DNAJC10Q8IXB1 793 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 SPC24Q8NBT2 197 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 ARID3AQ99856 593 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 HAUS7Q99871 368 aa9.1□□□□□ -0.95
NECAP1-224ENST00000640099 FTOQ9C0B1 505 aaKnown RBP eCLIP9.1□□□□□ -0.95
NECAP1-224ENST00000640099 TTC12Q9H892 705 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-224ENST00000640099 ZNF142P52746 1687 aaPredicted RBP9.09□□□□□ -0.95
NECAP1-224ENST00000640099 ADAMTSL3P82987 1691 aa9.09□□□□□ -0.95
NECAP1-224ENST00000640099 H7C1W4 665 aa9.09□□□□□ -0.95
NECAP1-224ENST00000640099 ADCY5O95622 1261 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms