RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 NFKBIEO00221 500 aa20.06■□□□□ 0.8
SPIN3-233ENST00000640039 ALDH1L1O75891 902 aa20.06■□□□□ 0.8
SPIN3-233ENST00000640039 LMNB1P20700 586 aa20.06■□□□□ 0.8
SPIN3-233ENST00000640039 GRAPQ13588 217 aa20.06■□□□□ 0.8
SPIN3-233ENST00000640039 FER1L6Q2WGJ9 1857 aa20.06■□□□□ 0.8
SPIN3-233ENST00000640039 C9orf131Q5VYM1 1079 aa20.06■□□□□ 0.8
SPIN3-233ENST00000640039 GRAPLQ8TC17 118 aaPredicted RBP20.06■□□□□ 0.8
SPIN3-233ENST00000640039 RNF181Q9P0P0 153 aa20.06■□□□□ 0.8
SPIN3-233ENST00000640039 KIF16BQ96L93 1317 aa20.05■□□□□ 0.8
SPIN3-233ENST00000640039 BBOX1O75936 387 aa20.05■□□□□ 0.8
SPIN3-233ENST00000640039 BRPF1P55201 1214 aaPredicted RBP20.05■□□□□ 0.8
SPIN3-233ENST00000640039 C9orf78Q9NZ63 289 aaPredicted RBP20.05■□□□□ 0.8
SPIN3-233ENST00000640039 SBF1O95248 1867 aa20.05■□□□□ 0.8
SPIN3-233ENST00000640039 LTBP3Q9NS15 1303 aa20.04■□□□□ 0.8
SPIN3-233ENST00000640039 MYH3P11055 1940 aa20.04■□□□□ 0.8
SPIN3-233ENST00000640039 CTSWP56202 376 aa20.04■□□□□ 0.8
SPIN3-233ENST00000640039 GRIPAP1Q4V328 841 aa20.04■□□□□ 0.8
SPIN3-233ENST00000640039 NMRK2Q9NPI5 230 aa20.04■□□□□ 0.8
SPIN3-233ENST00000640039 NOB1Q9ULX3 412 aaKnown RBP20.04■□□□□ 0.8
SPIN3-233ENST00000640039 OLFM4Q6UX06 510 aa20.03■□□□□ 0.8
SPIN3-233ENST00000640039 TMC4Q7Z404 712 aa20.03■□□□□ 0.8
SPIN3-233ENST00000640039 API5Q9BZZ5 524 aaKnown RBP20.03■□□□□ 0.8
SPIN3-233ENST00000640039 ATP6V0A2Q9Y487 856 aa20.03■□□□□ 0.8
SPIN3-233ENST00000640039 GRM8O00222 908 aa20.02■□□□□ 0.8
SPIN3-233ENST00000640039 TOMM70O94826 608 aa20.02■□□□□ 0.8
SPIN3-233ENST00000640039 FKBP4Q02790 459 aaKnown RBP eCLIP20.02■□□□□ 0.8
SPIN3-233ENST00000640039 CCDC85AQ96PX6 553 aaPredicted RBP20.02■□□□□ 0.8
SPIN3-233ENST00000640039 CCDC88AQ3V6T2 1871 aa20.02■□□□□ 0.8
SPIN3-233ENST00000640039 TAF1P21675 1872 aa20.01■□□□□ 0.79
SPIN3-233ENST00000640039 IPO8O15397 1037 aaKnown RBP20.01■□□□□ 0.79
SPIN3-233ENST00000640039 CASP7P55210 303 aa20.01■□□□□ 0.79
SPIN3-233ENST00000640039 SP8Q8IXZ3 490 aa20.01■□□□□ 0.79
SPIN3-233ENST00000640039 PLA2G12BQ9BX93 195 aa20.01■□□□□ 0.79
SPIN3-233ENST00000640039 TTLL11Q8NHH1 800 aa20■□□□□ 0.79
SPIN3-233ENST00000640039 CELF1Q92879 486 aaKnown RBP20■□□□□ 0.79
SPIN3-233ENST00000640039 RPS8P62241 208 aaKnown RBP19.99■□□□□ 0.79
SPIN3-233ENST00000640039 ARHGAP45Q92619 1136 aa19.99■□□□□ 0.79
SPIN3-233ENST00000640039 FRAT1Q92837 279 aaPredicted RBP19.99■□□□□ 0.79
SPIN3-233ENST00000640039 CDC5LQ99459 802 aaKnown RBP19.99■□□□□ 0.79
SPIN3-233ENST00000640039 PSMD1Q99460 953 aa19.99■□□□□ 0.79
SPIN3-233ENST00000640039 SEC31BQ9NQW1 1179 aa19.99■□□□□ 0.79
SPIN3-233ENST00000640039 ZC3H4Q9UPT8 1303 aaKnown RBP19.99■□□□□ 0.79
SPIN3-233ENST00000640039 BCAR3O75815 825 aa19.98■□□□□ 0.79
SPIN3-233ENST00000640039 CCT4P50991 539 aaKnown RBP19.98■□□□□ 0.79
SPIN3-233ENST00000640039 ANKRD18AQ8IVF6 992 aa19.98■□□□□ 0.79
SPIN3-233ENST00000640039 ZNF277Q9NRM2 450 aaPredicted RBP19.98■□□□□ 0.79
SPIN3-233ENST00000640039 RTL9Q8NET4 1388 aa19.97■□□□□ 0.79
SPIN3-233ENST00000640039 TIAM2Q8IVF5 1701 aa19.97■□□□□ 0.79
SPIN3-233ENST00000640039 PRELPP51888 382 aa19.97■□□□□ 0.79
SPIN3-233ENST00000640039 DPP8Q6V1X1 898 aaPredicted RBP19.97■□□□□ 0.79
SPIN3-233ENST00000640039 MPNDQ8N594 471 aa19.97■□□□□ 0.79
SPIN3-233ENST00000640039 GREM2Q9H772 168 aa19.97■□□□□ 0.79
SPIN3-233ENST00000640039 CHMP3Q9Y3E7 222 aa19.97■□□□□ 0.79
SPIN3-233ENST00000640039 DICER1Q9UPY3 1922 aaKnown RBP19.96■□□□□ 0.79
SPIN3-233ENST00000640039 SNED1Q8TER0 1413 aa19.96■□□□□ 0.79
SPIN3-233ENST00000640039 SUPT20HQ8NEM7 779 aa19.96■□□□□ 0.79
SPIN3-233ENST00000640039 IARSP41252 1262 aaKnown RBP19.95■□□□□ 0.78
SPIN3-233ENST00000640039 FAM161AQ3B820 660 aa19.95■□□□□ 0.78
SPIN3-233ENST00000640039 SLC51AQ86UW1 340 aa19.95■□□□□ 0.78
SPIN3-233ENST00000640039 LRRC37AA6NMS7 1700 aa19.95■□□□□ 0.78
SPIN3-233ENST00000640039 CSF1RP07333 972 aa19.94■□□□□ 0.78
SPIN3-233ENST00000640039 NBPF7P0C2Y1 421 aaPredicted RBP19.94■□□□□ 0.78
SPIN3-233ENST00000640039 ITGA6P23229 1130 aa19.94■□□□□ 0.78
SPIN3-233ENST00000640039 IGHMBP2P38935 993 aaKnown RBP19.94■□□□□ 0.78
SPIN3-233ENST00000640039 APLP1P51693 650 aa19.94■□□□□ 0.78
SPIN3-233ENST00000640039 ATF7IPQ6VMQ6 1270 aa19.94■□□□□ 0.78
SPIN3-233ENST00000640039 DNAJC5GQ8N7S2 189 aa19.94■□□□□ 0.78
SPIN3-233ENST00000640039 RBM46Q8TBY0 533 aaKnown RBP19.94■□□□□ 0.78
SPIN3-233ENST00000640039 UTYO14607 1347 aa19.94■□□□□ 0.78
SPIN3-233ENST00000640039 ANKRD18BA2A2Z9 1011 aa19.93■□□□□ 0.78
SPIN3-233ENST00000640039 TRIM27P14373 513 aa19.93■□□□□ 0.78
SPIN3-233ENST00000640039 FOXO4P98177 505 aa19.93■□□□□ 0.78
SPIN3-233ENST00000640039 IFIT5Q13325 482 aaKnown RBP19.93■□□□□ 0.78
SPIN3-233ENST00000640039 ZKSCAN2Q63HK3 967 aa19.93■□□□□ 0.78
SPIN3-233ENST00000640039 LMBR1LQ6UX01 489 aa19.93■□□□□ 0.78
SPIN3-233ENST00000640039 JDP2Q8WYK2 163 aa19.93■□□□□ 0.78
SPIN3-233ENST00000640039 YTHDC1Q96MU7 727 aaKnown RBP19.93■□□□□ 0.78
SPIN3-233ENST00000640039 NSFL1CQ9UNZ2 370 aaKnown RBP19.93■□□□□ 0.78
SPIN3-233ENST00000640039 KDM2BQ8NHM5 1336 aa19.93■□□□□ 0.78
SPIN3-233ENST00000640039 COL4A1P02462 1669 aa19.93■□□□□ 0.78
SPIN3-233ENST00000640039 DPY19L2Q6NUT2 758 aa19.92■□□□□ 0.78
SPIN3-233ENST00000640039 LARGE2Q8N3Y3 721 aa19.92■□□□□ 0.78
SPIN3-233ENST00000640039 SUCLG2Q96I99 432 aa19.92■□□□□ 0.78
SPIN3-233ENST00000640039 MPHOSPH8Q99549 860 aa19.92■□□□□ 0.78
SPIN3-233ENST00000640039 RTFDC1Q9BY42 306 aaPredicted RBP19.92■□□□□ 0.78
SPIN3-233ENST00000640039 USP44Q9H0E7 712 aa19.92■□□□□ 0.78
SPIN3-233ENST00000640039 SPEF2Q9C093 1822 aa19.92■□□□□ 0.78
SPIN3-233ENST00000640039 PPIP5K2O43314 1243 aa19.91■□□□□ 0.78
SPIN3-233ENST00000640039 CCDC57Q2TAC2 916 aa19.91■□□□□ 0.78
SPIN3-233ENST00000640039 TAF7LQ5H9L4 462 aa19.91■□□□□ 0.78
SPIN3-233ENST00000640039 VPS33BQ9H267 617 aa19.91■□□□□ 0.78
SPIN3-233ENST00000640039 RRAGCQ9HB90 399 aa19.91■□□□□ 0.78
SPIN3-233ENST00000640039 BSDC1Q9NW68 430 aaPredicted RBP19.91■□□□□ 0.78
SPIN3-233ENST00000640039 ANKIB1Q9P2G1 1089 aa19.91■□□□□ 0.78
SPIN3-233ENST00000640039 HDAC5Q9UQL6 1122 aa19.91■□□□□ 0.78
SPIN3-233ENST00000640039 C6orf229H3BNL8 230 aa19.9■□□□□ 0.78
SPIN3-233ENST00000640039 UBTFL1P0CB47 393 aaPredicted RBP19.9■□□□□ 0.78
SPIN3-233ENST00000640039 GPSM2P81274 684 aa19.9■□□□□ 0.78
SPIN3-233ENST00000640039 EPHA10Q5JZY3 1008 aa19.9■□□□□ 0.78
SPIN3-233ENST00000640039 CLUAP1Q96AJ1 413 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms