RNA–Protein interactions for RNA: ENST00000639794.1

SPIN3-228, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,681 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-228ENST00000639794 GRAPQ13588 217 aa21.38■■□□□ 1.01
SPIN3-228ENST00000639794 ALDH1L2Q3SY69 923 aa21.38■■□□□ 1.01
SPIN3-228ENST00000639794 GRAPLQ8TC17 118 aaPredicted RBP21.38■■□□□ 1.01
SPIN3-228ENST00000639794 SF3B3Q15393 1217 aaKnown RBP21.37■■□□□ 1.01
SPIN3-228ENST00000639794 TMX4Q9H1E5 349 aaPredicted RBP21.37■■□□□ 1.01
SPIN3-228ENST00000639794 SPEF2Q9C093 1822 aa21.37■■□□□ 1.01
SPIN3-228ENST00000639794 CCDC152Q4G0S7 254 aa21.37■■□□□ 1.01
SPIN3-228ENST00000639794 RTKN2Q8IZC4 609 aa21.37■■□□□ 1.01
SPIN3-228ENST00000639794 GPBP1L1Q9HC44 474 aaPredicted RBP21.37■■□□□ 1.01
SPIN3-228ENST00000639794 NOB1Q9ULX3 412 aaKnown RBP21.37■■□□□ 1.01
SPIN3-228ENST00000639794 H7C1W4 665 aa21.36■■□□□ 1.01
SPIN3-228ENST00000639794 HSP90B1P14625 803 aaKnown RBP21.36■■□□□ 1.01
SPIN3-228ENST00000639794 RARSP54136 660 aaKnown RBP21.36■■□□□ 1.01
SPIN3-228ENST00000639794 CTSWP56202 376 aa21.36■■□□□ 1.01
SPIN3-228ENST00000639794 FKBP4Q02790 459 aaKnown RBP eCLIP21.36■■□□□ 1.01
SPIN3-228ENST00000639794 SRCIN1Q9C0H9 1055 aa21.36■■□□□ 1.01
SPIN3-228ENST00000639794 CDHR2Q9BYE9 1310 aa21.36■■□□□ 1.01
SPIN3-228ENST00000639794 DICER1Q9UPY3 1922 aaKnown RBP21.36■■□□□ 1.01
SPIN3-228ENST00000639794 PTPRCP08575 1304 aa21.35■■□□□ 1.01
SPIN3-228ENST00000639794 CT47B1P0C2W7 299 aaPredicted RBP21.35■■□□□ 1.01
SPIN3-228ENST00000639794 C9orf78Q9NZ63 289 aaPredicted RBP21.35■■□□□ 1.01
SPIN3-228ENST00000639794 ATP6V0A2Q9Y487 856 aa21.35■■□□□ 1.01
SPIN3-228ENST00000639794 BBOX1O75936 387 aa21.34■■□□□ 1.01
SPIN3-228ENST00000639794 BCAR3O75815 825 aa21.34■■□□□ 1.01
SPIN3-228ENST00000639794 GREM2Q9H772 168 aa21.34■■□□□ 1.01
SPIN3-228ENST00000639794 CHMP3Q9Y3E7 222 aa21.34■■□□□ 1.01
SPIN3-228ENST00000639794 LTBP3Q9NS15 1303 aa21.33■■□□□ 1.01
SPIN3-228ENST00000639794 FRAT1Q92837 279 aaPredicted RBP21.33■■□□□ 1
SPIN3-228ENST00000639794 GRM8O00222 908 aa21.32■■□□□ 1
SPIN3-228ENST00000639794 CASP7P55210 303 aa21.32■■□□□ 1
SPIN3-228ENST00000639794 RPS8P62241 208 aaKnown RBP21.32■■□□□ 1
SPIN3-228ENST00000639794 TTLL11Q8NHH1 800 aa21.32■■□□□ 1
SPIN3-228ENST00000639794 CC2D2BQ6DHV5 1058 aa21.31■■□□□ 1
SPIN3-228ENST00000639794 DPP8Q6V1X1 898 aaPredicted RBP21.31■■□□□ 1
SPIN3-228ENST00000639794 SP8Q8IXZ3 490 aa21.31■■□□□ 1
SPIN3-228ENST00000639794 IARSP41252 1262 aaKnown RBP21.31■■□□□ 1
SPIN3-228ENST00000639794 FAM161AQ3B820 660 aa21.31■■□□□ 1
SPIN3-228ENST00000639794 MPNDQ8N594 471 aa21.31■■□□□ 1
SPIN3-228ENST00000639794 YTHDC1Q96MU7 727 aaKnown RBP21.31■■□□□ 1
SPIN3-228ENST00000639794 SNED1Q8TER0 1413 aa21.3■■□□□ 1
SPIN3-228ENST00000639794 ALDH1L1O75891 902 aa21.3■■□□□ 1
SPIN3-228ENST00000639794 NMRK2Q9NPI5 230 aa21.3■■□□□ 1
SPIN3-228ENST00000639794 NSFL1CQ9UNZ2 370 aaKnown RBP21.3■■□□□ 1
SPIN3-228ENST00000639794 NBPF7P0C2Y1 421 aaPredicted RBP21.29■■□□□ 1
SPIN3-228ENST00000639794 AOC3Q16853 763 aa21.29■■□□□ 1
SPIN3-228ENST00000639794 ANKRD18AQ8IVF6 992 aa21.29■■□□□ 1
SPIN3-228ENST00000639794 PSMD1Q99460 953 aa21.29■■□□□ 1
SPIN3-228ENST00000639794 EPHA10Q5JZY3 1008 aa21.28■■□□□ 1
SPIN3-228ENST00000639794 LARGE2Q8N3Y3 721 aa21.28■■□□□ 1
SPIN3-228ENST00000639794 GPR101Q96P66 508 aaPredicted RBP21.28■■□□□ 1
SPIN3-228ENST00000639794 TNNQ9UQP3 1299 aa21.28■■□□□ 1
SPIN3-228ENST00000639794 PPIP5K2O43314 1243 aa21.28■■□□□ 1
SPIN3-228ENST00000639794 ITGA6P23229 1130 aa21.28■■□□□ 1
SPIN3-228ENST00000639794 GPSM2P81274 684 aa21.28■■□□□ 1
SPIN3-228ENST00000639794 LRRC37AA6NMS7 1700 aa21.27■■□□□ 1
SPIN3-228ENST00000639794 FOXO4P98177 505 aa21.27■■□□□ 1
SPIN3-228ENST00000639794 SUCLG2Q96I99 432 aa21.27■■□□□ 1
SPIN3-228ENST00000639794 CDC5LQ99459 802 aaKnown RBP21.27■■□□□ 1
SPIN3-228ENST00000639794 ANKIB1Q9P2G1 1089 aa21.27■■□□□ 1
SPIN3-228ENST00000639794 COL4A5P29400 1685 aa21.26■□□□□ 0.99
SPIN3-228ENST00000639794 KIF16BQ96L93 1317 aa21.26■□□□□ 0.99
SPIN3-228ENST00000639794 C6orf229H3BNL8 230 aa21.26■□□□□ 0.99
SPIN3-228ENST00000639794 LMBR1LQ6UX01 489 aa21.26■□□□□ 0.99
SPIN3-228ENST00000639794 JDP2Q8WYK2 163 aa21.26■□□□□ 0.99
SPIN3-228ENST00000639794 CLUAP1Q96AJ1 413 aa21.26■□□□□ 0.99
SPIN3-228ENST00000639794 PLA2G12BQ9BX93 195 aa21.26■□□□□ 0.99
SPIN3-228ENST00000639794 RRAGCQ9HB90 399 aa21.26■□□□□ 0.99
SPIN3-228ENST00000639794 KDM2BQ8NHM5 1336 aa21.26■□□□□ 0.99
SPIN3-228ENST00000639794 RIMBP2O15034 1052 aa21.25■□□□□ 0.99
SPIN3-228ENST00000639794 TMC4Q7Z404 712 aa21.25■□□□□ 0.99
SPIN3-228ENST00000639794 API5Q9BZZ5 524 aaKnown RBP21.25■□□□□ 0.99
SPIN3-228ENST00000639794 ZNF541Q9H0D2 1346 aa21.25■□□□□ 0.99
SPIN3-228ENST00000639794 GLTPD2A6NH11 291 aa21.24■□□□□ 0.99
SPIN3-228ENST00000639794 DDNO94850 711 aaPredicted RBP21.24■□□□□ 0.99
SPIN3-228ENST00000639794 GRIPAP1Q4V328 841 aa21.24■□□□□ 0.99
SPIN3-228ENST00000639794 DPY19L2Q6NUT2 758 aa21.24■□□□□ 0.99
SPIN3-228ENST00000639794 DUOX1Q9NRD9 1551 aa21.23■□□□□ 0.99
SPIN3-228ENST00000639794 CSF1RP07333 972 aa21.23■□□□□ 0.99
SPIN3-228ENST00000639794 IGHMBP2P38935 993 aaKnown RBP21.23■□□□□ 0.99
SPIN3-228ENST00000639794 BRPF1P55201 1214 aaPredicted RBP21.23■□□□□ 0.99
SPIN3-228ENST00000639794 POLLQ9UGP5 575 aa21.23■□□□□ 0.99
SPIN3-228ENST00000639794 ZC3H4Q9UPT8 1303 aaKnown RBP21.23■□□□□ 0.99
SPIN3-228ENST00000639794 ANKRD18BA2A2Z9 1011 aa21.22■□□□□ 0.99
SPIN3-228ENST00000639794 IFIT5Q13325 482 aaKnown RBP21.22■□□□□ 0.99
SPIN3-228ENST00000639794 NIM1KQ8IY84 436 aa21.22■□□□□ 0.99
SPIN3-228ENST00000639794 SUPT20HQ8NEM7 779 aa21.22■□□□□ 0.99
SPIN3-228ENST00000639794 ZNF594Q96JF6 807 aaPredicted RBP21.22■□□□□ 0.99
SPIN3-228ENST00000639794 USP44Q9H0E7 712 aa21.22■□□□□ 0.99
SPIN3-228ENST00000639794 BICC1Q9H694 974 aaKnown RBP21.22■□□□□ 0.99
SPIN3-228ENST00000639794 WTIPA6NIX2 430 aaPredicted RBP21.21■□□□□ 0.99
SPIN3-228ENST00000639794 UFL1O94874 794 aa21.21■□□□□ 0.99
SPIN3-228ENST00000639794 TRIM27P14373 513 aa21.21■□□□□ 0.99
SPIN3-228ENST00000639794 CCT4P50991 539 aaKnown RBP21.21■□□□□ 0.99
SPIN3-228ENST00000639794 KAZALD1Q96I82 304 aa21.21■□□□□ 0.99
SPIN3-228ENST00000639794 MPHOSPH8Q99549 860 aa21.21■□□□□ 0.99
SPIN3-228ENST00000639794 GJA3Q9Y6H8 435 aa21.21■□□□□ 0.99
SPIN3-228ENST00000639794 KIF3CO14782 793 aa21.21■□□□□ 0.99
SPIN3-228ENST00000639794 IPO8O15397 1037 aaKnown RBP21.21■□□□□ 0.99
SPIN3-228ENST00000639794 TAF7LQ5H9L4 462 aa21.21■□□□□ 0.99
SPIN3-228ENST00000639794 RTFDC1Q9BY42 306 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms