RNA–Protein interactions for RNA: ENST00000639054.1

PAX6-250, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-250ENST00000639054 MSL1Q68DK7 614 aa14.6□□□□□ -0.07
PAX6-250ENST00000639054 NOP58Q9Y2X3 529 aaKnown RBP14.6□□□□□ -0.07
PAX6-250ENST00000639054 ABCC12Q96J65 1359 aa14.6□□□□□ -0.07
PAX6-250ENST00000639054 STK32BQ9NY57 414 aa14.59□□□□□ -0.07
PAX6-250ENST00000639054 MYH3P11055 1940 aa14.59□□□□□ -0.07
PAX6-250ENST00000639054 COL24A1Q17RW2 1714 aa14.59□□□□□ -0.07
PAX6-250ENST00000639054 TM4SF1P30408 202 aa14.59□□□□□ -0.07
PAX6-250ENST00000639054 RHPN1Q8TCX5 695 aa14.59□□□□□ -0.07
PAX6-250ENST00000639054 LRRCC1Q9C099 1032 aa14.59□□□□□ -0.07
PAX6-250ENST00000639054 SASH1O94885 1247 aa14.58□□□□□ -0.08
PAX6-250ENST00000639054 HMGB2P26583 209 aaKnown RBP14.58□□□□□ -0.08
PAX6-250ENST00000639054 DDR1Q08345 913 aa14.58□□□□□ -0.08
PAX6-250ENST00000639054 PUS3Q9BZE2 481 aaKnown RBP14.58□□□□□ -0.08
PAX6-250ENST00000639054 COPRSQ9NQ92 184 aa14.58□□□□□ -0.08
PAX6-250ENST00000639054 ITGA6P23229 1130 aa14.58□□□□□ -0.08
PAX6-250ENST00000639054 G3BP1Q13283 466 aaKnown RBP eCLIP14.58□□□□□ -0.08
PAX6-250ENST00000639054 CCDC57Q2TAC2 916 aa14.58□□□□□ -0.08
PAX6-250ENST00000639054 LRRC24Q50LG9 513 aa14.58□□□□□ -0.08
PAX6-250ENST00000639054 SEC31BQ9NQW1 1179 aa14.58□□□□□ -0.08
PAX6-250ENST00000639054 CARMIL3Q8ND23 1372 aa14.57□□□□□ -0.08
PAX6-250ENST00000639054 NPHP1O15259 732 aa14.57□□□□□ -0.08
PAX6-250ENST00000639054 TPTE2Q6XPS3 522 aa14.57□□□□□ -0.08
PAX6-250ENST00000639054 UPF1Q92900 1129 aaKnown RBP eCLIP14.57□□□□□ -0.08
PAX6-250ENST00000639054 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
PAX6-250ENST00000639054 RAB11FIP3O75154 756 aa14.57□□□□□ -0.08
PAX6-250ENST00000639054 SERPINB2P05120 415 aa14.57□□□□□ -0.08
PAX6-250ENST00000639054 IFIT5Q13325 482 aaKnown RBP14.57□□□□□ -0.08
PAX6-250ENST00000639054 CCDC125Q86Z20 511 aa14.57□□□□□ -0.08
PAX6-250ENST00000639054 FLAD1Q8NFF5 587 aa14.57□□□□□ -0.08
PAX6-250ENST00000639054 NYXQ9GZU5 481 aa14.57□□□□□ -0.08
PAX6-250ENST00000639054 TSHZ3Q63HK5 1081 aa14.56□□□□□ -0.08
PAX6-250ENST00000639054 ATG9AQ7Z3C6 839 aa14.56□□□□□ -0.08
PAX6-250ENST00000639054 KIF1BPQ96EK5 621 aa14.56□□□□□ -0.08
PAX6-250ENST00000639054 CASZ1Q86V15 1759 aa14.56□□□□□ -0.08
PAX6-250ENST00000639054 COL4A1P02462 1669 aa14.56□□□□□ -0.08
PAX6-250ENST00000639054 POLRMTO00411 1230 aaKnown RBP14.55□□□□□ -0.08
PAX6-250ENST00000639054 PRR5LQ6MZQ0 368 aa14.55□□□□□ -0.08
PAX6-250ENST00000639054 PLEKHM2Q8IWE5 1019 aa14.55□□□□□ -0.08
PAX6-250ENST00000639054 TAF1P21675 1872 aa14.55□□□□□ -0.08
PAX6-250ENST00000639054 TFCP2Q12800 502 aa14.55□□□□□ -0.08
PAX6-250ENST00000639054 HSP90AB4PQ58FF6 505 aa14.55□□□□□ -0.08
PAX6-250ENST00000639054 SLC10A5Q5PT55 438 aa14.55□□□□□ -0.08
PAX6-250ENST00000639054 CNBD1Q8NA66 436 aa14.55□□□□□ -0.08
PAX6-250ENST00000639054 LAMB2P55268 1798 aa14.55□□□□□ -0.08
PAX6-250ENST00000639054 ANKRD18BA2A2Z9 1011 aa14.54□□□□□ -0.08
PAX6-250ENST00000639054 TAF7LQ5H9L4 462 aa14.54□□□□□ -0.08
PAX6-250ENST00000639054 NLGN1Q8N2Q7 840 aa14.54□□□□□ -0.08
PAX6-250ENST00000639054 TNRC6CQ9HCJ0 1690 aaKnown RBP14.53□□□□□ -0.08
PAX6-250ENST00000639054 EYA2O00167 538 aa14.53□□□□□ -0.08
PAX6-250ENST00000639054 MMP10P09238 476 aa14.53□□□□□ -0.08
PAX6-250ENST00000639054 CCDC152Q4G0S7 254 aa14.53□□□□□ -0.08
PAX6-250ENST00000639054 EAF2Q96CJ1 260 aaPredicted RBP14.53□□□□□ -0.08
PAX6-250ENST00000639054 NLRP3Q96P20 1036 aa14.53□□□□□ -0.08
PAX6-250ENST00000639054 CCDC8Q9H0W5 538 aaPredicted RBP14.53□□□□□ -0.08
PAX6-250ENST00000639054 SF3B3Q15393 1217 aaKnown RBP14.52□□□□□ -0.08
PAX6-250ENST00000639054 LDHAL6AQ6ZMR3 332 aa14.52□□□□□ -0.08
PAX6-250ENST00000639054 ERC1Q8IUD2 1116 aa14.52□□□□□ -0.08
PAX6-250ENST00000639054 SALL3Q9BXA9 1300 aa14.52□□□□□ -0.09
PAX6-250ENST00000639054 ILDR2Q71H61 639 aa14.52□□□□□ -0.09
PAX6-250ENST00000639054 TLR7Q9NYK1 1049 aaKnown RBP14.52□□□□□ -0.09
PAX6-250ENST00000639054 SPEF2Q9C093 1822 aa14.51□□□□□ -0.09
PAX6-250ENST00000639054 HSP90B1P14625 803 aaKnown RBP14.51□□□□□ -0.09
PAX6-250ENST00000639054 AACSQ86V21 672 aa14.51□□□□□ -0.09
PAX6-250ENST00000639054 CNNM1Q9NRU3 951 aa14.51□□□□□ -0.09
PAX6-250ENST00000639054 IL15P40933 162 aaPredicted RBP14.5□□□□□ -0.09
PAX6-250ENST00000639054 PDE1AP54750 535 aa14.5□□□□□ -0.09
PAX6-250ENST00000639054 SLC51AQ86UW1 340 aa14.5□□□□□ -0.09
PAX6-250ENST00000639054 CLASRPQ8N2M8 674 aaKnown RBP14.5□□□□□ -0.09
PAX6-250ENST00000639054 CELF1Q92879 486 aaKnown RBP14.5□□□□□ -0.09
PAX6-250ENST00000639054 RIPOR2Q9Y4F9 1068 aa14.5□□□□□ -0.09
PAX6-250ENST00000639054 QSER1Q2KHR3 1735 aa14.5□□□□□ -0.09
PAX6-250ENST00000639054 HELBQ8NG08 1087 aaPredicted RBP14.5□□□□□ -0.09
PAX6-250ENST00000639054 CIAO1O76071 339 aa14.49□□□□□ -0.09
PAX6-250ENST00000639054 GSPT1P15170 499 aaKnown RBP14.49□□□□□ -0.09
PAX6-250ENST00000639054 MX1P20591 662 aa14.49□□□□□ -0.09
PAX6-250ENST00000639054 ST5P78524 1137 aa14.49□□□□□ -0.09
PAX6-250ENST00000639054 TNNI3KQ59H18 835 aa14.49□□□□□ -0.09
PAX6-250ENST00000639054 PARP3Q9Y6F1 533 aa14.49□□□□□ -0.09
PAX6-250ENST00000639054 FPGT-TNNI3KV9GXZ4 949 aa14.49□□□□□ -0.09
PAX6-250ENST00000639054 TIMM10P62072 90 aa14.49□□□□□ -0.09
PAX6-250ENST00000639054 TSHZ2Q9NRE2 1034 aa14.49□□□□□ -0.09
PAX6-250ENST00000639054 RTL9Q8NET4 1388 aa14.48□□□□□ -0.09
PAX6-250ENST00000639054 SNAP23O00161 211 aa14.48□□□□□ -0.09
PAX6-250ENST00000639054 IFIT2P09913 472 aaKnown RBP14.48□□□□□ -0.09
PAX6-250ENST00000639054 MPHOSPH8Q99549 860 aa14.48□□□□□ -0.09
PAX6-250ENST00000639054 RIC1Q4ADV7 1423 aa14.48□□□□□ -0.09
PAX6-250ENST00000639054 R3HDM1Q15032 1099 aaKnown RBP14.48□□□□□ -0.09
PAX6-250ENST00000639054 METTL24Q5JXM2 366 aa14.48□□□□□ -0.09
PAX6-250ENST00000639054 TTC22Q5TAA0 569 aa14.48□□□□□ -0.09
PAX6-250ENST00000639054 NEUROD6Q96NK8 337 aa14.48□□□□□ -0.09
PAX6-250ENST00000639054 CEP126Q9P2H0 1117 aa14.48□□□□□ -0.09
PAX6-250ENST00000639054 TAF5LO75529 589 aa14.47□□□□□ -0.09
PAX6-250ENST00000639054 IGHMBP2P38935 993 aaKnown RBP14.47□□□□□ -0.09
PAX6-250ENST00000639054 DBNDD2Q9BQY9 259 aa14.47□□□□□ -0.09
PAX6-250ENST00000639054 DBNLQ9UJU6 430 aaKnown RBP14.47□□□□□ -0.09
PAX6-250ENST00000639054 GOLGB1Q14789 3259 aaKnown RBP14.47□□□□□ -0.09
PAX6-250ENST00000639054 ANKRD31Q8N7Z5 1873 aa14.47□□□□□ -0.09
PAX6-250ENST00000639054 NRXN2Q9P2S2 1712 aa14.47□□□□□ -0.09
PAX6-250ENST00000639054 WTIPA6NIX2 430 aaPredicted RBP14.46□□□□□ -0.09
PAX6-250ENST00000639054 ZBTB7AO95365 584 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms