RNA–Protein interactions for RNA: ENST00000639038.1

NECAP1-214, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,423 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-214ENST00000639038 GNAI1P63096 354 aa10.12□□□□□ -0.79
NECAP1-214ENST00000639038 DCTN1Q14203 1278 aa10.12□□□□□ -0.79
NECAP1-214ENST00000639038 MEX3CQ5U5Q3 659 aaKnown RBP10.12□□□□□ -0.79
NECAP1-214ENST00000639038 IL17REQ8NFR9 667 aa10.12□□□□□ -0.79
NECAP1-214ENST00000639038 SCYL1Q96KG9 808 aa10.12□□□□□ -0.79
NECAP1-214ENST00000639038 ARPC5LQ9BPX5 153 aa10.12□□□□□ -0.79
NECAP1-214ENST00000639038 THUMPD2Q9BTF0 503 aaKnown RBP10.12□□□□□ -0.79
NECAP1-214ENST00000639038 CEP83Q9Y592 693 aa10.12□□□□□ -0.79
NECAP1-214ENST00000639038 CEMIPQ8WUJ3 1361 aa10.12□□□□□ -0.79
NECAP1-214ENST00000639038 NAALADL2Q58DX5 795 aa10.12□□□□□ -0.79
NECAP1-214ENST00000639038 ZC3H12AQ5D1E8 599 aaKnown RBP10.12□□□□□ -0.79
NECAP1-214ENST00000639038 MCM10Q7L590 875 aa10.12□□□□□ -0.79
NECAP1-214ENST00000639038 ACRBPQ8NEB7 543 aa10.12□□□□□ -0.79
NECAP1-214ENST00000639038 CALR3Q96L12 384 aaKnown RBP10.12□□□□□ -0.79
NECAP1-214ENST00000639038 MPHOSPH10O00566 681 aaKnown RBP10.11□□□□□ -0.79
NECAP1-214ENST00000639038 PHKG2P15735 406 aa10.11□□□□□ -0.79
NECAP1-214ENST00000639038 HDLBPQ00341 1268 aaKnown RBP10.11□□□□□ -0.79
NECAP1-214ENST00000639038 PTPROQ16827 1216 aa10.11□□□□□ -0.79
NECAP1-214ENST00000639038 IFNL2Q8IZJ0 200 aa10.11□□□□□ -0.79
NECAP1-214ENST00000639038 ENOX1Q8TC92 643 aaKnown RBP10.11□□□□□ -0.79
NECAP1-214ENST00000639038 RANBP17Q9H2T7 1088 aaKnown RBP10.11□□□□□ -0.79
NECAP1-214ENST00000639038 SHANK3Q9BYB0 1731 aa10.11□□□□□ -0.79
NECAP1-214ENST00000639038 CHL1O00533 1208 aa10.11□□□□□ -0.79
NECAP1-214ENST00000639038 RNMTO43148 476 aaKnown RBP10.11□□□□□ -0.79
NECAP1-214ENST00000639038 FLT3P36888 993 aa10.11□□□□□ -0.79
NECAP1-214ENST00000639038 RSPH1Q8WYR4 309 aa10.11□□□□□ -0.79
NECAP1-214ENST00000639038 BABAM1Q9NWV8 329 aa10.11□□□□□ -0.79
NECAP1-214ENST00000639038 USP21Q9UK80 565 aa10.11□□□□□ -0.79
NECAP1-214ENST00000639038 VIRMAQ69YN4 1812 aaKnown RBP10.11□□□□□ -0.79
NECAP1-214ENST00000639038 PCDH11XQ9BZA7 1347 aa10.1□□□□□ -0.79
NECAP1-214ENST00000639038 PCDH11YQ9BZA8 1340 aa10.1□□□□□ -0.79
NECAP1-214ENST00000639038 PPP1R12AO14974 1030 aaPredicted RBP10.1□□□□□ -0.79
NECAP1-214ENST00000639038 CYP27B1O15528 508 aa10.1□□□□□ -0.79
NECAP1-214ENST00000639038 CBFA2T2O43439 604 aa10.1□□□□□ -0.79
NECAP1-214ENST00000639038 HSP90AB1P08238 724 aaKnown RBP10.1□□□□□ -0.79
NECAP1-214ENST00000639038 MCM6Q14566 821 aa10.1□□□□□ -0.79
NECAP1-214ENST00000639038 SCN11AQ9UI33 1791 aa10.1□□□□□ -0.79
NECAP1-214ENST00000639038 IGHDP01880 384 aa10.09□□□□□ -0.79
NECAP1-214ENST00000639038 VDRP11473 427 aa10.09□□□□□ -0.79
NECAP1-214ENST00000639038 PEX19P40855 299 aa10.09□□□□□ -0.79
NECAP1-214ENST00000639038 CDC37Q16543 378 aaPredicted RBP10.09□□□□□ -0.79
NECAP1-214ENST00000639038 NBPF3Q9H094 633 aa10.09□□□□□ -0.79
NECAP1-214ENST00000639038 LGR6Q9HBX8 967 aa10.09□□□□□ -0.79
NECAP1-214ENST00000639038 AFF2P51816 1311 aa10.09□□□□□ -0.79
NECAP1-214ENST00000639038 PDILTQ8N807 584 aa10.09□□□□□ -0.79
NECAP1-214ENST00000639038 KLF15Q9UIH9 416 aa10.09□□□□□ -0.79
NECAP1-214ENST00000639038 SEMA3EO15041 775 aa10.08□□□□□ -0.8
NECAP1-214ENST00000639038 SLC4A2P04920 1241 aa10.08□□□□□ -0.8
NECAP1-214ENST00000639038 CD151P48509 253 aa10.08□□□□□ -0.8
NECAP1-214ENST00000639038 TAF7Q15545 349 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-214ENST00000639038 MPRIPQ6WCQ1 1025 aa10.08□□□□□ -0.8
NECAP1-214ENST00000639038 TSR2Q969E8 191 aaKnown RBP10.08□□□□□ -0.8
NECAP1-214ENST00000639038 DCAF5Q96JK2 942 aa10.08□□□□□ -0.8
NECAP1-214ENST00000639038 RPS6KC1Q96S38 1066 aa10.08□□□□□ -0.8
NECAP1-214ENST00000639038 MAP7D2Q96T17 732 aa10.08□□□□□ -0.8
NECAP1-214ENST00000639038 PAGR1Q9BTK6 254 aa10.08□□□□□ -0.8
NECAP1-214ENST00000639038 MBIPQ9NS73 344 aa10.08□□□□□ -0.8
NECAP1-214ENST00000639038 KDM6AO15550 1401 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-214ENST00000639038 ATRNO75882 1429 aa10.08□□□□□ -0.8
NECAP1-214ENST00000639038 PES1O00541 588 aaKnown RBP10.08□□□□□ -0.8
NECAP1-214ENST00000639038 PSMC1P62191 440 aaKnown RBP10.08□□□□□ -0.8
NECAP1-214ENST00000639038 SPACA7Q96KW9 195 aa10.08□□□□□ -0.8
NECAP1-214ENST00000639038 AGBL1Q96MI9 1066 aa10.08□□□□□ -0.8
NECAP1-214ENST00000639038 SUDS3Q9H7L9 328 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-214ENST00000639038 SIPA1L3O60292 1781 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-214ENST00000639038 SPDYE4A6NLX3 237 aa10.07□□□□□ -0.8
NECAP1-214ENST00000639038 MS4A1P11836 297 aa10.07□□□□□ -0.8
NECAP1-214ENST00000639038 BIRC2Q13490 618 aa10.07□□□□□ -0.8
NECAP1-214ENST00000639038 KCNB2Q92953 911 aa10.07□□□□□ -0.8
NECAP1-214ENST00000639038 RCAN3Q9UKA8 241 aa10.07□□□□□ -0.8
NECAP1-214ENST00000639038 TNS2Q63HR2 1409 aa10.07□□□□□ -0.8
NECAP1-214ENST00000639038 ZNF16P17020 682 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-214ENST00000639038 TERF1P54274 439 aa10.07□□□□□ -0.8
NECAP1-214ENST00000639038 CCT2P78371 535 aaKnown RBP10.07□□□□□ -0.8
NECAP1-214ENST00000639038 EGFLAMQ63HQ2 1017 aa10.07□□□□□ -0.8
NECAP1-214ENST00000639038 LRRC27Q9C0I9 530 aa10.07□□□□□ -0.8
NECAP1-214ENST00000639038 CXorf56Q9H5V9 222 aa10.07□□□□□ -0.8
NECAP1-214ENST00000639038 PRR12Q9ULL5 1215 aa10.07□□□□□ -0.8
NECAP1-214ENST00000639038 MRC1P22897 1456 aa10.07□□□□□ -0.8
NECAP1-214ENST00000639038 EXOSC9Q06265 439 aaKnown RBP10.06□□□□□ -0.8
NECAP1-214ENST00000639038 PDE4DQ08499 809 aa10.06□□□□□ -0.8
NECAP1-214ENST00000639038 PDAP1Q13442 181 aaKnown RBP10.06□□□□□ -0.8
NECAP1-214ENST00000639038 SF3A1Q15459 793 aaKnown RBP10.06□□□□□ -0.8
NECAP1-214ENST00000639038 TRPC5Q9UL62 973 aaPredicted RBP10.06□□□□□ -0.8
NECAP1-214ENST00000639038 RNF123Q5XPI4 1314 aa10.06□□□□□ -0.8
NECAP1-214ENST00000639038 BICDL2A1A5D9 508 aa10.06□□□□□ -0.8
NECAP1-214ENST00000639038 GOLGA6L3A6NEY3 463 aa10.06□□□□□ -0.8
NECAP1-214ENST00000639038 TEFQ10587 303 aa10.06□□□□□ -0.8
NECAP1-214ENST00000639038 OGFOD1Q8N543 542 aa10.06□□□□□ -0.8
NECAP1-214ENST00000639038 KDM3BQ7LBC6 1761 aa10.05□□□□□ -0.8
NECAP1-214ENST00000639038 GLI3P10071 1580 aa10.05□□□□□ -0.8
NECAP1-214ENST00000639038 ERVV-2B6SEH9 535 aa10.05□□□□□ -0.8
NECAP1-214ENST00000639038 HOXA2O43364 376 aa10.05□□□□□ -0.8
NECAP1-214ENST00000639038 NAP1L1P55209 391 aaKnown RBP10.05□□□□□ -0.8
NECAP1-214ENST00000639038 HMGN5P82970 282 aaKnown RBP10.05□□□□□ -0.8
NECAP1-214ENST00000639038 TBC1D10BQ4KMP7 808 aaPredicted RBP10.05□□□□□ -0.8
NECAP1-214ENST00000639038 LSM14AQ8ND56 463 aaKnown RBP10.05□□□□□ -0.8
NECAP1-214ENST00000639038 DDX54Q8TDD1 881 aaKnown RBP10.05□□□□□ -0.8
NECAP1-214ENST00000639038 GJD4Q96KN9 370 aaPredicted RBP10.05□□□□□ -0.8
NECAP1-214ENST00000639038 SLC52A2Q9HAB3 445 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms