RNA–Protein interactions for RNA: ENST00000638878.1

PAX6-242, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-242ENST00000638878 CRAMP1Q96RY5 1269 aa12.39□□□□□ -0.43
PAX6-242ENST00000638878 PTPRCP08575 1304 aa12.38□□□□□ -0.43
PAX6-242ENST00000638878 BRCA1P38398 1863 aaKnown RBP12.38□□□□□ -0.43
PAX6-242ENST00000638878 PCCAP05165 728 aaPredicted RBP12.38□□□□□ -0.43
PAX6-242ENST00000638878 IGKV5-2P06315 115 aa12.38□□□□□ -0.43
PAX6-242ENST00000638878 FKBP5Q13451 457 aaPredicted RBP12.38□□□□□ -0.43
PAX6-242ENST00000638878 NFKBIBQ15653 356 aa12.38□□□□□ -0.43
PAX6-242ENST00000638878 SOGA3Q5TF21 947 aa12.38□□□□□ -0.43
PAX6-242ENST00000638878 NUTM1Q86Y26 1132 aa12.38□□□□□ -0.43
PAX6-242ENST00000638878 MRPL50Q8N5N7 158 aaKnown RBP12.38□□□□□ -0.43
PAX6-242ENST00000638878 DNAAF4Q8WXU2 420 aa12.38□□□□□ -0.43
PAX6-242ENST00000638878 CWC25Q9NXE8 425 aaPredicted RBP12.38□□□□□ -0.43
PAX6-242ENST00000638878 BCS1LQ9Y276 419 aa12.38□□□□□ -0.43
PAX6-242ENST00000638878 N4BP2Q86UW6 1770 aaPredicted RBP12.38□□□□□ -0.43
PAX6-242ENST00000638878 ANKRD31Q8N7Z5 1873 aa12.37□□□□□ -0.43
PAX6-242ENST00000638878 ATP5J2-PTCD1G3V325 749 aa12.37□□□□□ -0.43
PAX6-242ENST00000638878 PDE3AQ14432 1141 aa12.37□□□□□ -0.43
PAX6-242ENST00000638878 SF3B3Q15393 1217 aaKnown RBP12.37□□□□□ -0.43
PAX6-242ENST00000638878 CC2D2BQ6DHV5 1058 aa12.37□□□□□ -0.43
PAX6-242ENST00000638878 SSH1Q8WYL5 1049 aa12.37□□□□□ -0.43
PAX6-242ENST00000638878 MYD88Q99836 296 aa12.37□□□□□ -0.43
PAX6-242ENST00000638878 ANKRD36CQ5JPF3 1778 aa12.37□□□□□ -0.43
PAX6-242ENST00000638878 DLEC1Q9Y238 1755 aa12.37□□□□□ -0.43
PAX6-242ENST00000638878 FAM177BA6PVY3 158 aa12.36□□□□□ -0.43
PAX6-242ENST00000638878 H7C1W4 665 aa12.36□□□□□ -0.43
PAX6-242ENST00000638878 BBOX1O75936 387 aa12.36□□□□□ -0.43
PAX6-242ENST00000638878 MKRN4PQ13434 485 aaPredicted RBP12.36□□□□□ -0.43
PAX6-242ENST00000638878 C8orf34Q49A92 452 aa12.36□□□□□ -0.43
PAX6-242ENST00000638878 CCDC24Q8N4L8 307 aa12.36□□□□□ -0.43
PAX6-242ENST00000638878 ARHGAP45Q92619 1136 aa12.36□□□□□ -0.43
PAX6-242ENST00000638878 ZNF622Q969S3 477 aaKnown RBP eCLIP12.36□□□□□ -0.43
PAX6-242ENST00000638878 FAM89AQ96GI7 184 aa12.36□□□□□ -0.43
PAX6-242ENST00000638878 RBM17Q96I25 401 aaKnown RBP12.36□□□□□ -0.43
PAX6-242ENST00000638878 CDHR2Q9BYE9 1310 aa12.36□□□□□ -0.43
PAX6-242ENST00000638878 ARFGEF2Q9Y6D5 1785 aa12.36□□□□□ -0.43
PAX6-242ENST00000638878 ARFGEF1Q9Y6D6 1849 aa12.35□□□□□ -0.43
PAX6-242ENST00000638878 NEURL1BA8MQ27 555 aa12.35□□□□□ -0.43
PAX6-242ENST00000638878 GCKRQ14397 625 aa12.35□□□□□ -0.43
PAX6-242ENST00000638878 BEND3Q5T5X7 828 aa12.35□□□□□ -0.43
PAX6-242ENST00000638878 TMC4Q7Z404 712 aa12.35□□□□□ -0.43
PAX6-242ENST00000638878 LTBP3Q9NS15 1303 aa12.35□□□□□ -0.43
PAX6-242ENST00000638878 ABCC12Q96J65 1359 aa12.35□□□□□ -0.43
PAX6-242ENST00000638878 ALDH1L1O75891 902 aa12.34□□□□□ -0.43
PAX6-242ENST00000638878 RARSP54136 660 aaKnown RBP12.34□□□□□ -0.43
PAX6-242ENST00000638878 PRPF40BQ6NWY9 871 aaKnown RBP12.34□□□□□ -0.43
PAX6-242ENST00000638878 RPGRQ92834 1020 aaKnown RBP12.34□□□□□ -0.43
PAX6-242ENST00000638878 IRS4O14654 1257 aaPredicted RBP12.33□□□□□ -0.44
PAX6-242ENST00000638878 PDE8AO60658 829 aa12.33□□□□□ -0.44
PAX6-242ENST00000638878 HCLS1P14317 486 aaPredicted RBP12.33□□□□□ -0.44
PAX6-242ENST00000638878 C20orf194Q5TEA3 1177 aa12.33□□□□□ -0.44
PAX6-242ENST00000638878 ARHGAP27Q6ZUM4 889 aa12.33□□□□□ -0.44
PAX6-242ENST00000638878 RTKN2Q8IZC4 609 aa12.33□□□□□ -0.44
PAX6-242ENST00000638878 SYNE4Q8N205 404 aa12.33□□□□□ -0.44
PAX6-242ENST00000638878 PLA2G12BQ9BX93 195 aa12.33□□□□□ -0.44
PAX6-242ENST00000638878 VPS33BQ9H267 617 aa12.32□□□□□ -0.44
PAX6-242ENST00000638878 IPO8O15397 1037 aaKnown RBP12.31□□□□□ -0.44
PAX6-242ENST00000638878 CASP7P55210 303 aa12.31□□□□□ -0.44
PAX6-242ENST00000638878 BECN1Q14457 450 aa12.31□□□□□ -0.44
PAX6-242ENST00000638878 CWF19L2Q2TBE0 894 aaKnown RBP12.31□□□□□ -0.44
PAX6-242ENST00000638878 DDX46Q7L014 1031 aaKnown RBP12.31□□□□□ -0.44
PAX6-242ENST00000638878 SRCIN1Q9C0H9 1055 aa12.31□□□□□ -0.44
PAX6-242ENST00000638878 SMC4Q9NTJ3 1288 aa12.31□□□□□ -0.44
PAX6-242ENST00000638878 UTYO14607 1347 aa12.31□□□□□ -0.44
PAX6-242ENST00000638878 ZC3H4Q9UPT8 1303 aaKnown RBP12.31□□□□□ -0.44
PAX6-242ENST00000638878 C21orf2O43822 256 aa12.3□□□□□ -0.44
PAX6-242ENST00000638878 CSF1RP07333 972 aa12.3□□□□□ -0.44
PAX6-242ENST00000638878 GRAPQ13588 217 aa12.3□□□□□ -0.44
PAX6-242ENST00000638878 C3orf67Q6ZVT6 689 aa12.3□□□□□ -0.44
PAX6-242ENST00000638878 SP8Q8IXZ3 490 aa12.3□□□□□ -0.44
PAX6-242ENST00000638878 GRAPLQ8TC17 118 aaPredicted RBP12.3□□□□□ -0.44
PAX6-242ENST00000638878 PSMD1Q99460 953 aa12.3□□□□□ -0.44
PAX6-242ENST00000638878 ATP6V0A2Q9Y487 856 aa12.3□□□□□ -0.44
PAX6-242ENST00000638878 KIF16BQ96L93 1317 aa12.3□□□□□ -0.44
PAX6-242ENST00000638878 RTL9Q8NET4 1388 aa12.3□□□□□ -0.44
PAX6-242ENST00000638878 F6X3S4 739 aa12.3□□□□□ -0.44
PAX6-242ENST00000638878 COL11A2P13942 1736 aaPredicted RBP12.3□□□□□ -0.44
PAX6-242ENST00000638878 LMNB1P20700 586 aa12.3□□□□□ -0.44
PAX6-242ENST00000638878 CCDC152Q4G0S7 254 aa12.3□□□□□ -0.44
PAX6-242ENST00000638878 CCDC93Q567U6 631 aa12.3□□□□□ -0.44
PAX6-242ENST00000638878 IL27Q8NEV9 243 aa12.3□□□□□ -0.44
PAX6-242ENST00000638878 TTLL11Q8NHH1 800 aa12.3□□□□□ -0.44
PAX6-242ENST00000638878 API5Q9BZZ5 524 aaKnown RBP12.3□□□□□ -0.44
PAX6-242ENST00000638878 TMX4Q9H1E5 349 aaPredicted RBP12.3□□□□□ -0.44
PAX6-242ENST00000638878 SLX4Q8IY92 1834 aa12.29□□□□□ -0.44
PAX6-242ENST00000638878 SNED1Q8TER0 1413 aa12.29□□□□□ -0.44
PAX6-242ENST00000638878 ABCC4O15439 1325 aa12.29□□□□□ -0.44
PAX6-242ENST00000638878 NFKBIEO00221 500 aa12.29□□□□□ -0.44
PAX6-242ENST00000638878 GRM8O00222 908 aa12.29□□□□□ -0.44
PAX6-242ENST00000638878 RPS8P62241 208 aaKnown RBP12.29□□□□□ -0.44
PAX6-242ENST00000638878 RTFDC1Q9BY42 306 aaPredicted RBP12.29□□□□□ -0.44
PAX6-242ENST00000638878 WWC3Q9ULE0 1092 aa12.29□□□□□ -0.44
PAX6-242ENST00000638878 NOB1Q9ULX3 412 aaKnown RBP12.29□□□□□ -0.44
PAX6-242ENST00000638878 TNRC6CQ9HCJ0 1690 aaKnown RBP12.28□□□□□ -0.44
PAX6-242ENST00000638878 CEP350Q5VT06 3117 aa12.28□□□□□ -0.44
PAX6-242ENST00000638878 PPEF1O14829 653 aaPredicted RBP12.28□□□□□ -0.44
PAX6-242ENST00000638878 CCT4P50991 539 aaKnown RBP12.28□□□□□ -0.44
PAX6-242ENST00000638878 CTSWP56202 376 aa12.28□□□□□ -0.44
PAX6-242ENST00000638878 FKBP4Q02790 459 aaKnown RBP eCLIP12.28□□□□□ -0.44
PAX6-242ENST00000638878 UBE3BQ7Z3V4 1068 aa12.28□□□□□ -0.44
PAX6-242ENST00000638878 HDAC5Q9UQL6 1122 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms