RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 CWF19L2Q2TBE0 894 aaKnown RBP12.19□□□□□ -0.46
SCARB2-214ENST00000638843 CCDC93Q567U6 631 aa12.19□□□□□ -0.46
SCARB2-214ENST00000638843 SOGA3Q5TF21 947 aa12.19□□□□□ -0.46
SCARB2-214ENST00000638843 ZBTB38Q8NAP3 1195 aaPredicted RBP12.19□□□□□ -0.46
SCARB2-214ENST00000638843 TAOK3Q9H2K8 898 aa12.19□□□□□ -0.46
SCARB2-214ENST00000638843 GPBP1L1Q9HC44 474 aaPredicted RBP12.19□□□□□ -0.46
SCARB2-214ENST00000638843 CWC25Q9NXE8 425 aaPredicted RBP12.19□□□□□ -0.46
SCARB2-214ENST00000638843 TNRC6CQ9HCJ0 1690 aaKnown RBP12.19□□□□□ -0.46
SCARB2-214ENST00000638843 TRMT2AQ8IZ69 625 aaKnown RBP12.18□□□□□ -0.46
SCARB2-214ENST00000638843 ABCC4O15439 1325 aa12.18□□□□□ -0.46
SCARB2-214ENST00000638843 LTBP3Q9NS15 1303 aa12.18□□□□□ -0.46
SCARB2-214ENST00000638843 CHD4Q14839 1912 aa12.18□□□□□ -0.46
SCARB2-214ENST00000638843 PCCAP05165 728 aaPredicted RBP12.18□□□□□ -0.46
SCARB2-214ENST00000638843 DLEC1Q9Y238 1755 aa12.17□□□□□ -0.46
SCARB2-214ENST00000638843 NEURL1BA8MQ27 555 aa12.17□□□□□ -0.46
SCARB2-214ENST00000638843 F6X3S4 739 aa12.17□□□□□ -0.46
SCARB2-214ENST00000638843 PPEF1O14829 653 aaPredicted RBP12.17□□□□□ -0.46
SCARB2-214ENST00000638843 NEXNQ0ZGT2 675 aa12.17□□□□□ -0.46
SCARB2-214ENST00000638843 SF3B3Q15393 1217 aaKnown RBP12.17□□□□□ -0.46
SCARB2-214ENST00000638843 DDX46Q7L014 1031 aaKnown RBP12.17□□□□□ -0.46
SCARB2-214ENST00000638843 RTKN2Q8IZC4 609 aa12.17□□□□□ -0.46
SCARB2-214ENST00000638843 DNAAF4Q8WXU2 420 aa12.17□□□□□ -0.46
SCARB2-214ENST00000638843 DCBLD2Q96PD2 775 aa12.17□□□□□ -0.46
SCARB2-214ENST00000638843 ZNF277Q9NRM2 450 aaPredicted RBP12.17□□□□□ -0.46
SCARB2-214ENST00000638843 SLX4Q8IY92 1834 aa12.17□□□□□ -0.46
SCARB2-214ENST00000638843 ARFGEF1Q9Y6D6 1849 aa12.17□□□□□ -0.46
SCARB2-214ENST00000638843 BBOX1O75936 387 aa12.16□□□□□ -0.46
SCARB2-214ENST00000638843 FKBP4Q02790 459 aaKnown RBP eCLIP12.16□□□□□ -0.46
SCARB2-214ENST00000638843 ATP6V0A2Q9Y487 856 aa12.16□□□□□ -0.46
SCARB2-214ENST00000638843 SNED1Q8TER0 1413 aa12.15□□□□□ -0.46
SCARB2-214ENST00000638843 GRAPQ13588 217 aa12.15□□□□□ -0.46
SCARB2-214ENST00000638843 CC2D2BQ6DHV5 1058 aa12.15□□□□□ -0.46
SCARB2-214ENST00000638843 GRAPLQ8TC17 118 aaPredicted RBP12.15□□□□□ -0.46
SCARB2-214ENST00000638843 SSH1Q8WYL5 1049 aa12.15□□□□□ -0.46
SCARB2-214ENST00000638843 CELF1Q92879 486 aaKnown RBP12.15□□□□□ -0.46
SCARB2-214ENST00000638843 NMRK2Q9NPI5 230 aa12.15□□□□□ -0.46
SCARB2-214ENST00000638843 ZC3H4Q9UPT8 1303 aaKnown RBP12.14□□□□□ -0.47
SCARB2-214ENST00000638843 H7C1W4 665 aa12.14□□□□□ -0.47
SCARB2-214ENST00000638843 GCKRQ14397 625 aa12.14□□□□□ -0.47
SCARB2-214ENST00000638843 BEND3Q5T5X7 828 aa12.14□□□□□ -0.47
SCARB2-214ENST00000638843 MRPL50Q8N5N7 158 aaKnown RBP12.14□□□□□ -0.47
SCARB2-214ENST00000638843 LINS1Q8NG48 757 aa12.14□□□□□ -0.47
SCARB2-214ENST00000638843 PSMD1Q99460 953 aa12.14□□□□□ -0.47
SCARB2-214ENST00000638843 KIF3CO14782 793 aa12.13□□□□□ -0.47
SCARB2-214ENST00000638843 PDE8AO60658 829 aa12.13□□□□□ -0.47
SCARB2-214ENST00000638843 HSP90B1P14625 803 aaKnown RBP12.13□□□□□ -0.47
SCARB2-214ENST00000638843 UBE3BQ7Z3V4 1068 aa12.13□□□□□ -0.47
SCARB2-214ENST00000638843 SP8Q8IXZ3 490 aa12.13□□□□□ -0.47
SCARB2-214ENST00000638843 ZNF579Q8NAF0 562 aaKnown RBP12.13□□□□□ -0.47
SCARB2-214ENST00000638843 CCDC85AQ96PX6 553 aaPredicted RBP12.13□□□□□ -0.47
SCARB2-214ENST00000638843 BCL2L13Q9BXK5 485 aa12.13□□□□□ -0.47
SCARB2-214ENST00000638843 SEC31BQ9NQW1 1179 aa12.13□□□□□ -0.47
SCARB2-214ENST00000638843 CDHR2Q9BYE9 1310 aa12.13□□□□□ -0.47
SCARB2-214ENST00000638843 GLTPD2A6NH11 291 aa12.13□□□□□ -0.47
SCARB2-214ENST00000638843 CASP7P55210 303 aa12.13□□□□□ -0.47
SCARB2-214ENST00000638843 HNRNPUQ00839 825 aaKnown RBP eCLIP12.13□□□□□ -0.47
SCARB2-214ENST00000638843 IARSP41252 1262 aaKnown RBP12.12□□□□□ -0.47
SCARB2-214ENST00000638843 C1QTNF8P60827 252 aa12.12□□□□□ -0.47
SCARB2-214ENST00000638843 RPS8P62241 208 aaKnown RBP12.12□□□□□ -0.47
SCARB2-214ENST00000638843 CCDC152Q4G0S7 254 aa12.12□□□□□ -0.47
SCARB2-214ENST00000638843 GRIPAP1Q4V328 841 aa12.12□□□□□ -0.47
SCARB2-214ENST00000638843 TMX4Q9H1E5 349 aaPredicted RBP12.12□□□□□ -0.47
SCARB2-214ENST00000638843 ARFGEF2Q9Y6D5 1785 aa12.12□□□□□ -0.47
SCARB2-214ENST00000638843 KDM2BQ8NHM5 1336 aa12.11□□□□□ -0.47
SCARB2-214ENST00000638843 ANKRD36CQ5JPF3 1778 aa12.11□□□□□ -0.47
SCARB2-214ENST00000638843 CTSWP56202 376 aa12.11□□□□□ -0.47
SCARB2-214ENST00000638843 SLC4A10Q6U841 1118 aa12.11□□□□□ -0.47
SCARB2-214ENST00000638843 TTLL11Q8NHH1 800 aa12.11□□□□□ -0.47
SCARB2-214ENST00000638843 RRAGCQ9HB90 399 aa12.11□□□□□ -0.47
SCARB2-214ENST00000638843 PLSCR2Q9NRY7 297 aa12.11□□□□□ -0.47
SCARB2-214ENST00000638843 ALDH1L2Q3SY69 923 aa12.1□□□□□ -0.47
SCARB2-214ENST00000638843 DPY19L2Q6NUT2 758 aa12.1□□□□□ -0.47
SCARB2-214ENST00000638843 DPP8Q6V1X1 898 aaPredicted RBP12.1□□□□□ -0.47
SCARB2-214ENST00000638843 TMC4Q7Z404 712 aa12.1□□□□□ -0.47
SCARB2-214ENST00000638843 MPNDQ8N594 471 aa12.1□□□□□ -0.47
SCARB2-214ENST00000638843 RTFDC1Q9BY42 306 aaPredicted RBP12.1□□□□□ -0.47
SCARB2-214ENST00000638843 CEP350Q5VT06 3117 aa12.1□□□□□ -0.47
SCARB2-214ENST00000638843 POTECB2RU33 542 aa12.09□□□□□ -0.47
SCARB2-214ENST00000638843 FZD9O00144 591 aa12.09□□□□□ -0.47
SCARB2-214ENST00000638843 DDNO94850 711 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-214ENST00000638843 CT47B1P0C2W7 299 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-214ENST00000638843 LARGE2Q8N3Y3 721 aa12.09□□□□□ -0.47
SCARB2-214ENST00000638843 PLA2G12BQ9BX93 195 aa12.09□□□□□ -0.47
SCARB2-214ENST00000638843 GREM2Q9H772 168 aa12.09□□□□□ -0.47
SCARB2-214ENST00000638843 SMC4Q9NTJ3 1288 aa12.09□□□□□ -0.47
SCARB2-214ENST00000638843 COL4A1P02462 1669 aa12.09□□□□□ -0.47
SCARB2-214ENST00000638843 GPSM2P81274 684 aa12.09□□□□□ -0.47
SCARB2-214ENST00000638843 AOC3Q16853 763 aa12.09□□□□□ -0.47
SCARB2-214ENST00000638843 JDP2Q8WYK2 163 aa12.09□□□□□ -0.47
SCARB2-214ENST00000638843 SRCIN1Q9C0H9 1055 aa12.09□□□□□ -0.47
SCARB2-214ENST00000638843 NSFL1CQ9UNZ2 370 aaKnown RBP12.09□□□□□ -0.47
SCARB2-214ENST00000638843 FER1L6Q2WGJ9 1857 aa12.08□□□□□ -0.48
SCARB2-214ENST00000638843 PTPRCP08575 1304 aa12.08□□□□□ -0.48
SCARB2-214ENST00000638843 ZNF541Q9H0D2 1346 aa12.08□□□□□ -0.48
SCARB2-214ENST00000638843 PPIP5K2O43314 1243 aa12.08□□□□□ -0.48
SCARB2-214ENST00000638843 ALDH1L1O75891 902 aa12.08□□□□□ -0.48
SCARB2-214ENST00000638843 CSF1RP07333 972 aa12.08□□□□□ -0.48
SCARB2-214ENST00000638843 RARSP54136 660 aaKnown RBP12.08□□□□□ -0.48
SCARB2-214ENST00000638843 SBF1O95248 1867 aa12.07□□□□□ -0.48
SCARB2-214ENST00000638843 COL4A5P29400 1685 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms