RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 TRIM27P14373 513 aa11.2□□□□□ -0.62
NECAP1-212ENST00000638787 CCT4P50991 539 aaKnown RBP11.2□□□□□ -0.62
NECAP1-212ENST00000638787 CTSWP56202 376 aa11.2□□□□□ -0.62
NECAP1-212ENST00000638787 CCDC152Q4G0S7 254 aa11.2□□□□□ -0.62
NECAP1-212ENST00000638787 ZKSCAN2Q63HK3 967 aa11.2□□□□□ -0.62
NECAP1-212ENST00000638787 ATF7IPQ6VMQ6 1270 aa11.2□□□□□ -0.62
NECAP1-212ENST00000638787 PLA2G12BQ9BX93 195 aa11.2□□□□□ -0.62
NECAP1-212ENST00000638787 UTRNP46939 3433 aa11.2□□□□□ -0.62
NECAP1-212ENST00000638787 PPEF1O14829 653 aaPredicted RBP11.2□□□□□ -0.62
NECAP1-212ENST00000638787 GRAPQ13588 217 aa11.2□□□□□ -0.62
NECAP1-212ENST00000638787 GRAPLQ8TC17 118 aaPredicted RBP11.2□□□□□ -0.62
NECAP1-212ENST00000638787 CCDC85AQ96PX6 553 aaPredicted RBP11.2□□□□□ -0.62
NECAP1-212ENST00000638787 RCAN3Q9UKA8 241 aa11.2□□□□□ -0.62
NECAP1-212ENST00000638787 TNNQ9UQP3 1299 aa11.2□□□□□ -0.62
NECAP1-212ENST00000638787 FER1L6Q2WGJ9 1857 aa11.19□□□□□ -0.62
NECAP1-212ENST00000638787 SOGA3Q5TF21 947 aa11.19□□□□□ -0.62
NECAP1-212ENST00000638787 OLFM4Q6UX06 510 aa11.19□□□□□ -0.62
NECAP1-212ENST00000638787 TTLL11Q8NHH1 800 aa11.19□□□□□ -0.62
NECAP1-212ENST00000638787 COL4A1P02462 1669 aa11.19□□□□□ -0.62
NECAP1-212ENST00000638787 UTYO14607 1347 aa11.19□□□□□ -0.62
NECAP1-212ENST00000638787 CCDC93Q567U6 631 aa11.18□□□□□ -0.62
NECAP1-212ENST00000638787 CLUAP1Q96AJ1 413 aa11.18□□□□□ -0.62
NECAP1-212ENST00000638787 SEC31BQ9NQW1 1179 aa11.18□□□□□ -0.62
NECAP1-212ENST00000638787 NFKBIEO00221 500 aa11.18□□□□□ -0.62
NECAP1-212ENST00000638787 BBOX1O75936 387 aa11.18□□□□□ -0.62
NECAP1-212ENST00000638787 NBPF7P0C2Y1 421 aaPredicted RBP11.18□□□□□ -0.62
NECAP1-212ENST00000638787 RASSF7Q02833 373 aa11.18□□□□□ -0.62
NECAP1-212ENST00000638787 INTS3Q68E01 1043 aaKnown RBP11.18□□□□□ -0.62
NECAP1-212ENST00000638787 SLC51AQ86UW1 340 aa11.18□□□□□ -0.62
NECAP1-212ENST00000638787 CELF1Q92879 486 aaKnown RBP11.18□□□□□ -0.62
NECAP1-212ENST00000638787 USP44Q9H0E7 712 aa11.18□□□□□ -0.62
NECAP1-212ENST00000638787 RTL9Q8NET4 1388 aa11.17□□□□□ -0.62
NECAP1-212ENST00000638787 CSF1RP07333 972 aa11.17□□□□□ -0.62
NECAP1-212ENST00000638787 FOXO4P98177 505 aa11.17□□□□□ -0.62
NECAP1-212ENST00000638787 EPHA10Q5JZY3 1008 aa11.17□□□□□ -0.62
NECAP1-212ENST00000638787 CC2D2BQ6DHV5 1058 aa11.17□□□□□ -0.62
NECAP1-212ENST00000638787 SUCLG2Q96I99 432 aa11.17□□□□□ -0.62
NECAP1-212ENST00000638787 GREM2Q9H772 168 aa11.17□□□□□ -0.62
NECAP1-212ENST00000638787 SBF1O95248 1867 aa11.17□□□□□ -0.62
NECAP1-212ENST00000638787 SNED1Q8TER0 1413 aa11.17□□□□□ -0.62
NECAP1-212ENST00000638787 RPS8P62241 208 aaKnown RBP11.16□□□□□ -0.62
NECAP1-212ENST00000638787 TMC4Q7Z404 712 aa11.16□□□□□ -0.62
NECAP1-212ENST00000638787 ATP6V0A2Q9Y487 856 aa11.16□□□□□ -0.62
NECAP1-212ENST00000638787 LRRC37AA6NMS7 1700 aa11.16□□□□□ -0.62
NECAP1-212ENST00000638787 LTBP3Q9NS15 1303 aa11.16□□□□□ -0.62
NECAP1-212ENST00000638787 FAM161AQ3B820 660 aa11.16□□□□□ -0.62
NECAP1-212ENST00000638787 FTSJ3Q8IY81 847 aaKnown RBP11.16□□□□□ -0.62
NECAP1-212ENST00000638787 RTKN2Q8IZC4 609 aa11.16□□□□□ -0.62
NECAP1-212ENST00000638787 KAZALD1Q96I82 304 aa11.16□□□□□ -0.62
NECAP1-212ENST00000638787 TMX4Q9H1E5 349 aaPredicted RBP11.16□□□□□ -0.62
NECAP1-212ENST00000638787 TAOK3Q9H2K8 898 aa11.16□□□□□ -0.62
NECAP1-212ENST00000638787 SPEF2Q9C093 1822 aa11.16□□□□□ -0.62
NECAP1-212ENST00000638787 ITGA6P23229 1130 aa11.15□□□□□ -0.62
NECAP1-212ENST00000638787 LMBR1LQ6UX01 489 aa11.15□□□□□ -0.62
NECAP1-212ENST00000638787 SP8Q8IXZ3 490 aa11.15□□□□□ -0.62
NECAP1-212ENST00000638787 DZIP1LQ8IYY4 767 aaKnown RBP11.15□□□□□ -0.62
NECAP1-212ENST00000638787 TMEM57Q8N5G2 664 aa11.15□□□□□ -0.62
NECAP1-212ENST00000638787 CDC5LQ99459 802 aaKnown RBP11.15□□□□□ -0.62
NECAP1-212ENST00000638787 BICC1Q9H694 974 aaKnown RBP11.15□□□□□ -0.62
NECAP1-212ENST00000638787 CHMP3Q9Y3E7 222 aa11.15□□□□□ -0.62
NECAP1-212ENST00000638787 CCDC88AQ3V6T2 1871 aa11.15□□□□□ -0.62
NECAP1-212ENST00000638787 UBTFL1P0CB47 393 aaPredicted RBP11.15□□□□□ -0.63
NECAP1-212ENST00000638787 RLBP1P12271 317 aa11.15□□□□□ -0.63
NECAP1-212ENST00000638787 PRELPP51888 382 aa11.15□□□□□ -0.63
NECAP1-212ENST00000638787 FKBP4Q02790 459 aaKnown RBP eCLIP11.15□□□□□ -0.63
NECAP1-212ENST00000638787 GRIPAP1Q4V328 841 aa11.15□□□□□ -0.63
NECAP1-212ENST00000638787 C9orf131Q5VYM1 1079 aa11.15□□□□□ -0.63
NECAP1-212ENST00000638787 ANKRD18AQ8IVF6 992 aa11.15□□□□□ -0.63
NECAP1-212ENST00000638787 LMNB1P20700 586 aa11.14□□□□□ -0.63
NECAP1-212ENST00000638787 ANKRD44Q8N8A2 993 aa11.14□□□□□ -0.63
NECAP1-212ENST00000638787 PSMD1Q99460 953 aa11.14□□□□□ -0.63
NECAP1-212ENST00000638787 MEIS3Q99687 375 aa11.14□□□□□ -0.63
NECAP1-212ENST00000638787 RNF181Q9P0P0 153 aa11.14□□□□□ -0.63
NECAP1-212ENST00000638787 ANKRD18BA2A2Z9 1011 aa11.13□□□□□ -0.63
NECAP1-212ENST00000638787 PLIN1O60240 522 aa11.13□□□□□ -0.63
NECAP1-212ENST00000638787 YY1P25490 414 aa11.13□□□□□ -0.63
NECAP1-212ENST00000638787 IFIT5Q13325 482 aaKnown RBP11.13□□□□□ -0.63
NECAP1-212ENST00000638787 RABL6Q3YEC7 729 aaPredicted RBP11.13□□□□□ -0.63
NECAP1-212ENST00000638787 DICER1Q9UPY3 1922 aaKnown RBP11.13□□□□□ -0.63
NECAP1-212ENST00000638787 GNAI3P08754 354 aa11.13□□□□□ -0.63
NECAP1-212ENST00000638787 IGHMBP2P38935 993 aaKnown RBP11.13□□□□□ -0.63
NECAP1-212ENST00000638787 CCDC57Q2TAC2 916 aa11.13□□□□□ -0.63
NECAP1-212ENST00000638787 DPP8Q6V1X1 898 aaPredicted RBP11.13□□□□□ -0.63
NECAP1-212ENST00000638787 ITPRIPQ8IWB1 547 aa11.13□□□□□ -0.63
NECAP1-212ENST00000638787 PANK1Q8TE04 598 aa11.13□□□□□ -0.63
NECAP1-212ENST00000638787 LTBP1Q14766 1721 aa11.12□□□□□ -0.63
NECAP1-212ENST00000638787 TIAM2Q8IVF5 1701 aa11.12□□□□□ -0.63
NECAP1-212ENST00000638787 MS4A1P11836 297 aa11.12□□□□□ -0.63
NECAP1-212ENST00000638787 MPNDQ8N594 471 aa11.12□□□□□ -0.63
NECAP1-212ENST00000638787 ZNF277Q9NRM2 450 aaPredicted RBP11.12□□□□□ -0.63
NECAP1-212ENST00000638787 BSDC1Q9NW68 430 aaPredicted RBP11.12□□□□□ -0.63
NECAP1-212ENST00000638787 HDAC5Q9UQL6 1122 aa11.12□□□□□ -0.63
NECAP1-212ENST00000638787 DUOX1Q9NRD9 1551 aa11.12□□□□□ -0.63
NECAP1-212ENST00000638787 GPSM2P81274 684 aa11.12□□□□□ -0.63
NECAP1-212ENST00000638787 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.12□□□□□ -0.63
NECAP1-212ENST00000638787 MPHOSPH8Q99549 860 aa11.12□□□□□ -0.63
NECAP1-212ENST00000638787 LRRFIP2Q9Y608 721 aaKnown RBP11.12□□□□□ -0.63
NECAP1-212ENST00000638787 TAF7LQ5H9L4 462 aa11.11□□□□□ -0.63
NECAP1-212ENST00000638787 SUPT20HQ8NEM7 779 aa11.11□□□□□ -0.63
NECAP1-212ENST00000638787 RTFDC1Q9BY42 306 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms