RNA–Protein interactions for RNA: ENST00000637806.1

SMARCA2-263, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 7,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-263ENST00000637806 LNPKQ9C0E8 428 aa11.25□□□□□ -0.61
SMARCA2-263ENST00000637806 FOXD4L6Q3SYB3 417 aaPredicted RBP11.24□□□□□ -0.61
SMARCA2-263ENST00000637806 FOXD4L3Q6VB84 417 aaPredicted RBP11.24□□□□□ -0.61
SMARCA2-263ENST00000637806 FLIIQ13045 1269 aa11.24□□□□□ -0.61
SMARCA2-263ENST00000637806 UBE2Q2Q8WVN8 375 aa11.24□□□□□ -0.61
SMARCA2-263ENST00000637806 MAP3K5Q99683 1374 aa11.24□□□□□ -0.61
SMARCA2-263ENST00000637806 MAP3K4Q9Y6R4 1608 aa11.24□□□□□ -0.61
SMARCA2-263ENST00000637806 IQCA1Q86XH1 822 aa11.24□□□□□ -0.61
SMARCA2-263ENST00000637806 SMC1BQ8NDV3 1235 aa11.24□□□□□ -0.61
SMARCA2-263ENST00000637806 PRKRIP1Q9H875 184 aaPredicted RBP11.24□□□□□ -0.61
SMARCA2-263ENST00000637806 ARHGEF12Q9NZN5 1544 aa11.24□□□□□ -0.61
SMARCA2-263ENST00000637806 TRIM21P19474 475 aaKnown RBP11.24□□□□□ -0.61
SMARCA2-263ENST00000637806 ARHGEF25Q86VW2 580 aa11.24□□□□□ -0.61
SMARCA2-263ENST00000637806 CPXCR1Q8N123 301 aa11.24□□□□□ -0.61
SMARCA2-263ENST00000637806 AS3MTQ9HBK9 375 aa11.24□□□□□ -0.61
SMARCA2-263ENST00000637806 DPEP1P16444 411 aa11.24□□□□□ -0.61
SMARCA2-263ENST00000637806 FER1L4A9Z1Z3 1794 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 TNNT3P45378 269 aaPredicted RBP11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 TSHZ2Q9NRE2 1034 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 FOXD4L1Q9NU39 408 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 PDE8AO60658 829 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 MFSD14BQ5SR56 506 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 PIGBQ92521 554 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 SH2D4AQ9H788 454 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 TEKT1Q969V4 418 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 ZBTB1Q9Y2K1 713 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 SPATA31A1Q5TZJ5 1347 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 PLEKHG3A1L390 1219 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 LMNB1P20700 586 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 BCAMP50895 628 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 DNTTIP2Q5QJE6 756 aaKnown RBP11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 ARHGEF1Q92888 912 aaKnown RBP11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 TNS3Q68CZ2 1445 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 ABCC11Q96J66 1382 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 OSBPP22059 807 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 AOC3Q16853 763 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 CHST3Q7LGC8 479 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 ZNF496Q96IT1 587 aaPredicted RBP11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 USP6P35125 1406 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 ITGA6P23229 1130 aa11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 PNMA8AQ86V59 439 aaPredicted RBP11.23□□□□□ -0.61
SMARCA2-263ENST00000637806 LRRCC1Q9C099 1032 aa11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 CC2D2BQ6DHV5 1058 aa11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 NCAPG2Q86XI2 1143 aa11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 PANK1Q8TE04 598 aa11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 PCMTD1Q96MG8 357 aaPredicted RBP11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 BMS1Q14692 1282 aaKnown RBP11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 ZFYVE27Q5T4F4 411 aa11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 IFT57Q9NWB7 429 aa11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 SSFA2P28290 1259 aa11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 COA7Q96BR5 231 aa11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 HOMER2Q9NSB8 354 aa11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 MCM9Q9NXL9 1143 aa11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 SBNO1A3KN83 1393 aa11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 OVOS2A0A0G2JMS6 1433 aa11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 OVOS2A0A0J9YW53 1432 aa11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 OVOS2Q6IE36 1432 aa11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 RPS6KA4O75676 772 aa11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 ARHGEF10LQ9HCE6 1279 aa11.22□□□□□ -0.61
SMARCA2-263ENST00000637806 UQCRFS1P1P0C7P4 283 aa11.21□□□□□ -0.61
SMARCA2-263ENST00000637806 ATP2B4P23634 1241 aa11.21□□□□□ -0.61
SMARCA2-263ENST00000637806 HOMER1Q86YM7 354 aa11.21□□□□□ -0.61
SMARCA2-263ENST00000637806 CCDC82Q8N4S0 544 aa11.21□□□□□ -0.61
SMARCA2-263ENST00000637806 FNBP4Q8N3X1 1017 aaPredicted RBP11.21□□□□□ -0.61
SMARCA2-263ENST00000637806 ZBBXA8MT70 800 aa11.21□□□□□ -0.62
SMARCA2-263ENST00000637806 TRIM22Q8IYM9 498 aa11.21□□□□□ -0.62
SMARCA2-263ENST00000637806 ANKRD36BQ8N2N9 1353 aa11.21□□□□□ -0.62
SMARCA2-263ENST00000637806 HIP1O00291 1037 aa11.21□□□□□ -0.62
SMARCA2-263ENST00000637806 TTF1Q15361 905 aaPredicted RBP11.21□□□□□ -0.62
SMARCA2-263ENST00000637806 PPM1EQ8WY54 764 aa11.21□□□□□ -0.62
SMARCA2-263ENST00000637806 MAST1Q9Y2H9 1570 aa11.21□□□□□ -0.62
SMARCA2-263ENST00000637806 SPATA31A5Q5VU36 1347 aa11.2□□□□□ -0.62
SMARCA2-263ENST00000637806 SPATA31A7Q8IWB4 1347 aa11.2□□□□□ -0.62
SMARCA2-263ENST00000637806 GOLIM4O00461 696 aa11.2□□□□□ -0.62
SMARCA2-263ENST00000637806 TFRCP02786 760 aaKnown RBP11.2□□□□□ -0.62
SMARCA2-263ENST00000637806 EPS15P42566 896 aa11.2□□□□□ -0.62
SMARCA2-263ENST00000637806 MIGA1Q8NAN2 632 aa11.2□□□□□ -0.62
SMARCA2-263ENST00000637806 USP40Q9NVE5 1235 aa11.2□□□□□ -0.62
SMARCA2-263ENST00000637806 NOP58Q9Y2X3 529 aaKnown RBP11.2□□□□□ -0.62
SMARCA2-263ENST00000637806 UBXN2AP68543 259 aa11.2□□□□□ -0.62
SMARCA2-263ENST00000637806 PTPRTO14522 1441 aa11.2□□□□□ -0.62
SMARCA2-263ENST00000637806 CCNA1P78396 465 aa11.19□□□□□ -0.62
SMARCA2-263ENST00000637806 TPM2P07951 284 aa11.19□□□□□ -0.62
SMARCA2-263ENST00000637806 NCBP1Q09161 790 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-263ENST00000637806 ODF2Q5BJF6 829 aa11.19□□□□□ -0.62
SMARCA2-263ENST00000637806 EXOC6BQ9Y2D4 811 aa11.19□□□□□ -0.62
SMARCA2-263ENST00000637806 A0A1W2PP64 1363 aa11.19□□□□□ -0.62
SMARCA2-263ENST00000637806 NOP56O00567 594 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-263ENST00000637806 CWF19L2Q2TBE0 894 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-263ENST00000637806 KAT14Q9H8E8 782 aa11.19□□□□□ -0.62
SMARCA2-263ENST00000637806 IMMTQ16891 758 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-263ENST00000637806 TTC6Q86TZ1 520 aa11.19□□□□□ -0.62
SMARCA2-263ENST00000637806 CTNNA3Q9UI47 895 aa11.18□□□□□ -0.62
SMARCA2-263ENST00000637806 PTPDC1A2A3K4 754 aa11.18□□□□□ -0.62
SMARCA2-263ENST00000637806 ST18O60284 1047 aa11.18□□□□□ -0.62
SMARCA2-263ENST00000637806 BBOX1O75936 387 aa11.18□□□□□ -0.62
SMARCA2-263ENST00000637806 USP17L8P0C7I0 530 aa11.18□□□□□ -0.62
SMARCA2-263ENST00000637806 DRC7Q8IY82 874 aa11.18□□□□□ -0.62
SMARCA2-263ENST00000637806 WDR66Q8TBY9 1149 aa11.18□□□□□ -0.62
SMARCA2-263ENST00000637806 CTCFLQ8NI51 663 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms