RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 FAM161AQ3B820 660 aa20.66■□□□□ 0.9
CLCN2-220ENST00000637538 SETDB2Q96T68 719 aa20.66■□□□□ 0.9
CLCN2-220ENST00000637538 LRP5O75197 1615 aa20.66■□□□□ 0.9
CLCN2-220ENST00000637538 FAM177BA6PVY3 158 aa20.65■□□□□ 0.9
CLCN2-220ENST00000637538 SLC10A5Q5PT55 438 aa20.65■□□□□ 0.9
CLCN2-220ENST00000637538 OSBPL3Q9H4L5 887 aa20.65■□□□□ 0.9
CLCN2-220ENST00000637538 RTL9Q8NET4 1388 aa20.65■□□□□ 0.9
CLCN2-220ENST00000637538 HCLS1P14317 486 aaPredicted RBP20.64■□□□□ 0.9
CLCN2-220ENST00000637538 HSP90B1P14625 803 aaKnown RBP20.64■□□□□ 0.9
CLCN2-220ENST00000637538 OS9Q13438 667 aaPredicted RBP20.64■□□□□ 0.9
CLCN2-220ENST00000637538 NFIXQ14938 502 aa20.64■□□□□ 0.9
CLCN2-220ENST00000637538 BICDL1Q6ZP65 573 aa20.64■□□□□ 0.9
CLCN2-220ENST00000637538 ATG9AQ7Z3C6 839 aa20.64■□□□□ 0.9
CLCN2-220ENST00000637538 NUTM1Q86Y26 1132 aa20.64■□□□□ 0.9
CLCN2-220ENST00000637538 NYXQ9GZU5 481 aa20.64■□□□□ 0.9
CLCN2-220ENST00000637538 SIL1Q9H173 461 aa20.64■□□□□ 0.9
CLCN2-220ENST00000637538 IL1RAPL2Q9NP60 686 aa20.64■□□□□ 0.9
CLCN2-220ENST00000637538 CHMP3Q9Y3E7 222 aa20.64■□□□□ 0.9
CLCN2-220ENST00000637538 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.64■□□□□ 0.9
CLCN2-220ENST00000637538 QSER1Q2KHR3 1735 aa20.64■□□□□ 0.89
CLCN2-220ENST00000637538 CARMIL3Q8ND23 1372 aa20.64■□□□□ 0.89
CLCN2-220ENST00000637538 ABCC12Q96J65 1359 aa20.64■□□□□ 0.89
CLCN2-220ENST00000637538 CASZ1Q86V15 1759 aa20.64■□□□□ 0.89
CLCN2-220ENST00000637538 CIAO1O76071 339 aa20.63■□□□□ 0.89
CLCN2-220ENST00000637538 C8orf34Q49A92 452 aa20.63■□□□□ 0.89
CLCN2-220ENST00000637538 ERFEQ4G0M1 354 aa20.63■□□□□ 0.89
CLCN2-220ENST00000637538 GREM2Q9H772 168 aa20.63■□□□□ 0.89
CLCN2-220ENST00000637538 TFCP2L1Q9NZI6 479 aa20.63■□□□□ 0.89
CLCN2-220ENST00000637538 STAP2Q9UGK3 403 aa20.63■□□□□ 0.89
CLCN2-220ENST00000637538 FBXO3Q9UK99 471 aa20.63■□□□□ 0.89
CLCN2-220ENST00000637538 CCDC57Q2TAC2 916 aa20.63■□□□□ 0.89
CLCN2-220ENST00000637538 BMP2KLQ5H9B9 411 aa20.63■□□□□ 0.89
CLCN2-220ENST00000637538 COL23A1Q86Y22 540 aaPredicted RBP20.63■□□□□ 0.89
CLCN2-220ENST00000637538 FLAD1Q8NFF5 587 aa20.63■□□□□ 0.89
CLCN2-220ENST00000637538 BACH2Q9BYV9 841 aa20.63■□□□□ 0.89
CLCN2-220ENST00000637538 EYA2O00167 538 aa20.62■□□□□ 0.89
CLCN2-220ENST00000637538 TM4SF1P30408 202 aa20.62■□□□□ 0.89
CLCN2-220ENST00000637538 PDE1AP54750 535 aa20.62■□□□□ 0.89
CLCN2-220ENST00000637538 IFIT5Q13325 482 aaKnown RBP20.62■□□□□ 0.89
CLCN2-220ENST00000637538 ZNF594Q96JF6 807 aaPredicted RBP20.62■□□□□ 0.89
CLCN2-220ENST00000637538 PNPLA7Q6ZV29 1317 aa20.61■□□□□ 0.89
CLCN2-220ENST00000637538 ITGA6P23229 1130 aa20.61■□□□□ 0.89
CLCN2-220ENST00000637538 NBPF5PQ86XG9 351 aaPredicted RBP20.61■□□□□ 0.89
CLCN2-220ENST00000637538 AOX1Q06278 1338 aa20.6■□□□□ 0.89
CLCN2-220ENST00000637538 RIC1Q4ADV7 1423 aa20.6■□□□□ 0.89
CLCN2-220ENST00000637538 MX1P20591 662 aa20.6■□□□□ 0.89
CLCN2-220ENST00000637538 TTC22Q5TAA0 569 aa20.6■□□□□ 0.89
CLCN2-220ENST00000637538 CLASRPQ8N2M8 674 aaKnown RBP20.6■□□□□ 0.89
CLCN2-220ENST00000637538 CCDC85AQ96PX6 553 aaPredicted RBP20.6■□□□□ 0.89
CLCN2-220ENST00000637538 ANKRD18BA2A2Z9 1011 aa20.59■□□□□ 0.89
CLCN2-220ENST00000637538 GSPT1P15170 499 aaKnown RBP20.59■□□□□ 0.89
CLCN2-220ENST00000637538 IL15P40933 162 aaPredicted RBP20.59■□□□□ 0.89
CLCN2-220ENST00000637538 SF3B3Q15393 1217 aaKnown RBP20.59■□□□□ 0.89
CLCN2-220ENST00000637538 LRRC24Q50LG9 513 aa20.59■□□□□ 0.89
CLCN2-220ENST00000637538 TPTE2Q6XPS3 522 aa20.59■□□□□ 0.89
CLCN2-220ENST00000637538 PDGFDQ9GZP0 370 aaPredicted RBP20.59■□□□□ 0.89
CLCN2-220ENST00000637538 TFCP2Q12800 502 aa20.58■□□□□ 0.89
CLCN2-220ENST00000637538 C3orf67Q6ZVT6 689 aa20.58■□□□□ 0.89
CLCN2-220ENST00000637538 EAF2Q96CJ1 260 aaPredicted RBP20.58■□□□□ 0.89
CLCN2-220ENST00000637538 PUS3Q9BZE2 481 aaKnown RBP20.58■□□□□ 0.89
CLCN2-220ENST00000637538 CCDC152Q4G0S7 254 aa20.58■□□□□ 0.88
CLCN2-220ENST00000637538 TNRC6CQ9HCJ0 1690 aaKnown RBP20.58■□□□□ 0.88
CLCN2-220ENST00000637538 COL4A1P02462 1669 aa20.57■□□□□ 0.88
CLCN2-220ENST00000637538 DDR1Q08345 913 aa20.57■□□□□ 0.88
CLCN2-220ENST00000637538 GPR108Q9NPR9 543 aa20.57■□□□□ 0.88
CLCN2-220ENST00000637538 RIPOR2Q9Y4F9 1068 aa20.57■□□□□ 0.88
CLCN2-220ENST00000637538 NRXN2Q9P2S2 1712 aa20.57■□□□□ 0.88
CLCN2-220ENST00000637538 BCL11AQ9H165 835 aa20.56■□□□□ 0.88
CLCN2-220ENST00000637538 SPON1Q9HCB6 807 aa20.56■□□□□ 0.88
CLCN2-220ENST00000637538 POLRMTO00411 1230 aaKnown RBP20.55■□□□□ 0.88
CLCN2-220ENST00000637538 TNNI3KQ59H18 835 aa20.55■□□□□ 0.88
CLCN2-220ENST00000637538 AACSQ86V21 672 aa20.55■□□□□ 0.88
CLCN2-220ENST00000637538 PI4K2BQ8TCG2 481 aa20.55■□□□□ 0.88
CLCN2-220ENST00000637538 SLC16A10Q8TF71 515 aa20.55■□□□□ 0.88
CLCN2-220ENST00000637538 SEC31BQ9NQW1 1179 aa20.55■□□□□ 0.88
CLCN2-220ENST00000637538 FPGT-TNNI3KV9GXZ4 949 aa20.55■□□□□ 0.88
CLCN2-220ENST00000637538 TTC41PQ6P2S7 1318 aa20.55■□□□□ 0.88
CLCN2-220ENST00000637538 GTF2E1P29083 439 aaPredicted RBP20.54■□□□□ 0.88
CLCN2-220ENST00000637538 TAF7LQ5H9L4 462 aa20.54■□□□□ 0.88
CLCN2-220ENST00000637538 TSHZ3Q63HK5 1081 aa20.54■□□□□ 0.88
CLCN2-220ENST00000637538 PRR5LQ6MZQ0 368 aa20.54■□□□□ 0.88
CLCN2-220ENST00000637538 NLGN1Q8N2Q7 840 aa20.54■□□□□ 0.88
CLCN2-220ENST00000637538 ZNF609O15014 1411 aa20.54■□□□□ 0.88
CLCN2-220ENST00000637538 SERPINB2P05120 415 aa20.53■□□□□ 0.88
CLCN2-220ENST00000637538 IFIT2P09913 472 aaKnown RBP20.53■□□□□ 0.88
CLCN2-220ENST00000637538 CNBD1Q8NA66 436 aa20.53■□□□□ 0.88
CLCN2-220ENST00000637538 MTFR1LQ9H019 292 aa20.53■□□□□ 0.88
CLCN2-220ENST00000637538 LDHAL6AQ6ZMR3 332 aa20.53■□□□□ 0.88
CLCN2-220ENST00000637538 VGLL2Q8N8G2 317 aa20.53■□□□□ 0.88
CLCN2-220ENST00000637538 TLR7Q9NYK1 1049 aaKnown RBP20.53■□□□□ 0.88
CLCN2-220ENST00000637538 RBM19Q9Y4C8 960 aaKnown RBP20.53■□□□□ 0.88
CLCN2-220ENST00000637538 ZBTB7AO95365 584 aa20.52■□□□□ 0.87
CLCN2-220ENST00000637538 NLRP3Q96P20 1036 aa20.52■□□□□ 0.87
CLCN2-220ENST00000637538 CCDC8Q9H0W5 538 aaPredicted RBP20.52■□□□□ 0.87
CLCN2-220ENST00000637538 ECHDC1Q9NTX5 307 aa20.52■□□□□ 0.87
CLCN2-220ENST00000637538 SDSP20132 328 aa20.51■□□□□ 0.87
CLCN2-220ENST00000637538 CCDC24Q8N4L8 307 aa20.51■□□□□ 0.87
CLCN2-220ENST00000637538 CEP126Q9P2H0 1117 aa20.51■□□□□ 0.87
CLCN2-220ENST00000637538 DBNLQ9UJU6 430 aaKnown RBP20.51■□□□□ 0.87
CLCN2-220ENST00000637538 SPEF2Q9C093 1822 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms