RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 CCDC191Q8NCU4 936 aa24.36■■□□□ 1.49
CLN6-221ENST00000637494 SF3B3Q15393 1217 aaKnown RBP24.35■■□□□ 1.49
CLN6-221ENST00000637494 FAM9BQ8IZU0 186 aa24.35■■□□□ 1.49
CLN6-221ENST00000637494 TAF1DQ9H5J8 278 aaPredicted RBP24.35■■□□□ 1.49
CLN6-221ENST00000637494 GJA3Q9Y6H8 435 aa24.35■■□□□ 1.49
CLN6-221ENST00000637494 NEXNQ0ZGT2 675 aa24.34■■□□□ 1.49
CLN6-221ENST00000637494 METTL22Q9BUU2 404 aaPredicted RBP24.34■■□□□ 1.49
CLN6-221ENST00000637494 CWC25Q9NXE8 425 aaPredicted RBP24.34■■□□□ 1.49
CLN6-221ENST00000637494 DDX60Q8IY21 1712 aaKnown RBP24.33■■□□□ 1.49
CLN6-221ENST00000637494 LMOD1P29536 600 aaPredicted RBP24.33■■□□□ 1.49
CLN6-221ENST00000637494 PNMA8AQ86V59 439 aaPredicted RBP24.33■■□□□ 1.49
CLN6-221ENST00000637494 LDHDQ86WU2 507 aa24.33■■□□□ 1.49
CLN6-221ENST00000637494 RTFDC1Q9BY42 306 aaPredicted RBP24.33■■□□□ 1.49
CLN6-221ENST00000637494 MAP3K2Q9Y2U5 619 aa24.33■■□□□ 1.49
CLN6-221ENST00000637494 AOC3Q16853 763 aa24.32■■□□□ 1.48
CLN6-221ENST00000637494 EAPPQ56P03 285 aaPredicted RBP24.32■■□□□ 1.48
CLN6-221ENST00000637494 KSR2Q6VAB6 950 aa24.32■■□□□ 1.48
CLN6-221ENST00000637494 CLEC11AQ9Y240 323 aa24.32■■□□□ 1.48
CLN6-221ENST00000637494 PCCAP05165 728 aaPredicted RBP24.31■■□□□ 1.48
CLN6-221ENST00000637494 EPHX2P34913 555 aa24.31■■□□□ 1.48
CLN6-221ENST00000637494 DNAJC5GQ8N7S2 189 aa24.31■■□□□ 1.48
CLN6-221ENST00000637494 SLC4A2P04920 1241 aa24.3■■□□□ 1.48
CLN6-221ENST00000637494 HTRA3P83110 453 aa24.3■■□□□ 1.48
CLN6-221ENST00000637494 FANCIQ9NVI1 1328 aa24.3■■□□□ 1.48
CLN6-221ENST00000637494 CEP350Q5VT06 3117 aa24.29■■□□□ 1.48
CLN6-221ENST00000637494 PI4KAP2A4QPH2 592 aa24.29■■□□□ 1.48
CLN6-221ENST00000637494 SLC51AQ86UW1 340 aa24.29■■□□□ 1.48
CLN6-221ENST00000637494 PI4KAP1Q8N8J0 262 aa24.29■■□□□ 1.48
CLN6-221ENST00000637494 KLRG1Q96E93 195 aa24.29■■□□□ 1.48
CLN6-221ENST00000637494 ZNRF3Q9ULT6 936 aa24.29■■□□□ 1.48
CLN6-221ENST00000637494 PDE8AO60658 829 aa24.28■■□□□ 1.48
CLN6-221ENST00000637494 POTEIP0CG38 1075 aa24.28■■□□□ 1.48
CLN6-221ENST00000637494 POTEJP0CG39 1038 aa24.28■■□□□ 1.48
CLN6-221ENST00000637494 KIAA2012Q0VF49 1180 aa24.28■■□□□ 1.48
CLN6-221ENST00000637494 CCDC152Q4G0S7 254 aa24.28■■□□□ 1.48
CLN6-221ENST00000637494 CELF1Q92879 486 aaKnown RBP24.28■■□□□ 1.48
CLN6-221ENST00000637494 MYH16Q9H6N6 1097 aa24.28■■□□□ 1.48
CLN6-221ENST00000637494 RPS8P62241 208 aaKnown RBP24.27■■□□□ 1.48
CLN6-221ENST00000637494 NSFL1CQ9UNZ2 370 aaKnown RBP24.27■■□□□ 1.48
CLN6-221ENST00000637494 COL4A5P29400 1685 aa24.27■■□□□ 1.48
CLN6-221ENST00000637494 C6orf229H3BNL8 230 aa24.24■■□□□ 1.47
CLN6-221ENST00000637494 EXOSC9Q06265 439 aaKnown RBP24.24■■□□□ 1.47
CLN6-221ENST00000637494 FLIIQ13045 1269 aa24.24■■□□□ 1.47
CLN6-221ENST00000637494 TNIP1Q15025 636 aa24.24■■□□□ 1.47
CLN6-221ENST00000637494 WASHC4Q2M389 1173 aa24.24■■□□□ 1.47
CLN6-221ENST00000637494 EYA3Q99504 573 aa24.24■■□□□ 1.47
CLN6-221ENST00000637494 CDHR2Q9BYE9 1310 aa24.24■■□□□ 1.47
CLN6-221ENST00000637494 TAF1P21675 1872 aa24.24■■□□□ 1.47
CLN6-221ENST00000637494 FKBP5Q13451 457 aaPredicted RBP24.23■■□□□ 1.47
CLN6-221ENST00000637494 CIAPIN1Q6FI81 312 aa24.23■■□□□ 1.47
CLN6-221ENST00000637494 LRRC37AA6NMS7 1700 aa24.23■■□□□ 1.47
CLN6-221ENST00000637494 VAMP4O75379 141 aa24.22■■□□□ 1.47
CLN6-221ENST00000637494 CXCL9Q07325 125 aa24.22■■□□□ 1.47
CLN6-221ENST00000637494 G2E3Q7L622 706 aa24.22■■□□□ 1.47
CLN6-221ENST00000637494 JARID2Q92833 1246 aaPredicted RBP24.22■■□□□ 1.47
CLN6-221ENST00000637494 CREBZFQ9NS37 354 aa24.22■■□□□ 1.47
CLN6-221ENST00000637494 IGKV5-2P06315 115 aa24.21■■□□□ 1.47
CLN6-221ENST00000637494 SCNN1DP51172 638 aa24.21■■□□□ 1.47
CLN6-221ENST00000637494 ANKRD18AQ8IVF6 992 aa24.21■■□□□ 1.47
CLN6-221ENST00000637494 BCL2L13Q9BXK5 485 aa24.21■■□□□ 1.47
CLN6-221ENST00000637494 NEURL1BA8MQ27 555 aa24.2■■□□□ 1.46
CLN6-221ENST00000637494 EPS15P42566 896 aa24.2■■□□□ 1.46
CLN6-221ENST00000637494 GPSM2P81274 684 aa24.2■■□□□ 1.46
CLN6-221ENST00000637494 CWF19L2Q2TBE0 894 aaKnown RBP24.2■■□□□ 1.46
CLN6-221ENST00000637494 USP50Q70EL3 339 aaPredicted RBP24.2■■□□□ 1.46
CLN6-221ENST00000637494 CCDC85AQ96PX6 553 aaPredicted RBP24.2■■□□□ 1.46
CLN6-221ENST00000637494 SEC31BQ9NQW1 1179 aa24.2■■□□□ 1.46
CLN6-221ENST00000637494 ANKIB1Q9P2G1 1089 aa24.2■■□□□ 1.46
CLN6-221ENST00000637494 G3V3G9 751 aa24.19■■□□□ 1.46
CLN6-221ENST00000637494 DCAF8Q5TAQ9 597 aa24.19■■□□□ 1.46
CLN6-221ENST00000637494 CNTROBQ8N137 903 aa24.19■■□□□ 1.46
CLN6-221ENST00000637494 DNAAF4Q8WXU2 420 aa24.19■■□□□ 1.46
CLN6-221ENST00000637494 CDC5LQ99459 802 aaKnown RBP24.19■■□□□ 1.46
CLN6-221ENST00000637494 RIMBP2O15034 1052 aa24.18■■□□□ 1.46
CLN6-221ENST00000637494 RAD17O75943 681 aa24.18■■□□□ 1.46
CLN6-221ENST00000637494 CTSWP56202 376 aa24.18■■□□□ 1.46
CLN6-221ENST00000637494 JMYQ8N9B5 988 aa24.18■■□□□ 1.46
CLN6-221ENST00000637494 ZC3H12CQ9C0D7 883 aaKnown RBP24.18■■□□□ 1.46
CLN6-221ENST00000637494 ADARB2Q9NS39 739 aaKnown RBP24.18■■□□□ 1.46
CLN6-221ENST00000637494 GPRC5DQ9NZD1 345 aa24.18■■□□□ 1.46
CLN6-221ENST00000637494 DUOX1Q9NRD9 1551 aa24.17■■□□□ 1.46
CLN6-221ENST00000637494 PASKQ96RG2 1323 aa24.17■■□□□ 1.46
CLN6-221ENST00000637494 CACNA1FO60840 1977 aa24.17■■□□□ 1.46
CLN6-221ENST00000637494 MAP1SQ66K74 1059 aaPredicted RBP24.17■■□□□ 1.46
CLN6-221ENST00000637494 UBE3BQ7Z3V4 1068 aa24.17■■□□□ 1.46
CLN6-221ENST00000637494 PODXL2Q9NZ53 605 aa24.17■■□□□ 1.46
CLN6-221ENST00000637494 ADAMTSL1Q8N6G6 1762 aa24.16■■□□□ 1.46
CLN6-221ENST00000637494 ITGBL1O95965 494 aaPredicted RBP24.16■■□□□ 1.46
CLN6-221ENST00000637494 GMPSP49915 693 aaPredicted RBP24.16■■□□□ 1.46
CLN6-221ENST00000637494 LINS1Q8NG48 757 aa24.16■■□□□ 1.46
CLN6-221ENST00000637494 TBC1D16Q8TBP0 767 aa24.16■■□□□ 1.46
CLN6-221ENST00000637494 POLLQ9UGP5 575 aa24.16■■□□□ 1.46
CLN6-221ENST00000637494 GGA1Q9UJY5 639 aa24.16■■□□□ 1.46
CLN6-221ENST00000637494 TMEM88BA6NKF7 163 aa24.15■■□□□ 1.46
CLN6-221ENST00000637494 H7C1W4 665 aa24.15■■□□□ 1.46
CLN6-221ENST00000637494 UFL1O94874 794 aa24.15■■□□□ 1.46
CLN6-221ENST00000637494 GCKRQ14397 625 aa24.15■■□□□ 1.46
CLN6-221ENST00000637494 DBNDD1Q9H9R9 158 aa24.15■■□□□ 1.46
CLN6-221ENST00000637494 SPINK5Q9NQ38 1064 aaPredicted RBP24.15■■□□□ 1.46
CLN6-221ENST00000637494 TTLL11Q8NHH1 800 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms