RNA–Protein interactions for RNA: ENST00000637350.1

CHRNA7-227, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,241 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-227ENST00000637350 FOXD4L5Q5VV16 416 aaPredicted RBP20.52■□□□□ 0.88
CHRNA7-227ENST00000637350 FOXD4L4Q8WXT5 416 aaPredicted RBP20.52■□□□□ 0.88
CHRNA7-227ENST00000637350 CCDC8Q9H0W5 538 aaPredicted RBP20.52■□□□□ 0.88
CHRNA7-227ENST00000637350 KLHL40Q2TBA0 621 aa20.51■□□□□ 0.87
CHRNA7-227ENST00000637350 CCDC87Q9NVE4 849 aa20.51■□□□□ 0.87
CHRNA7-227ENST00000637350 TRPC5Q9UL62 973 aaPredicted RBP20.51■□□□□ 0.87
CHRNA7-227ENST00000637350 CRKLP46109 303 aaKnown RBP20.51■□□□□ 0.87
CHRNA7-227ENST00000637350 DDX49Q9Y6V7 483 aaKnown RBP20.51■□□□□ 0.87
CHRNA7-227ENST00000637350 ATRNO75882 1429 aa20.5■□□□□ 0.87
CHRNA7-227ENST00000637350 MRE11P49959 708 aa20.5■□□□□ 0.87
CHRNA7-227ENST00000637350 PTH1RQ03431 593 aa20.5■□□□□ 0.87
CHRNA7-227ENST00000637350 HSP90AB3PQ58FF7 597 aa20.5■□□□□ 0.87
CHRNA7-227ENST00000637350 INTS5Q6P9B9 1019 aaKnown RBP20.5■□□□□ 0.87
CHRNA7-227ENST00000637350 FOXO4P98177 505 aa20.5■□□□□ 0.87
CHRNA7-227ENST00000637350 ITPK1Q13572 414 aa20.5■□□□□ 0.87
CHRNA7-227ENST00000637350 COPRSQ9NQ92 184 aa20.5■□□□□ 0.87
CHRNA7-227ENST00000637350 DIAPH3Q9NSV4 1193 aa20.5■□□□□ 0.87
CHRNA7-227ENST00000637350 ERVV-1B6SEH8 477 aa20.49■□□□□ 0.87
CHRNA7-227ENST00000637350 EIF5P55010 431 aaKnown RBP20.49■□□□□ 0.87
CHRNA7-227ENST00000637350 HLFQ16534 295 aa20.49■□□□□ 0.87
CHRNA7-227ENST00000637350 LMBR1LQ6UX01 489 aa20.49■□□□□ 0.87
CHRNA7-227ENST00000637350 DZIP3Q86Y13 1208 aaKnown RBP20.49■□□□□ 0.87
CHRNA7-227ENST00000637350 ONECUT3O60422 494 aaPredicted RBP20.49■□□□□ 0.87
CHRNA7-227ENST00000637350 RFX5P48382 616 aaPredicted RBP20.49■□□□□ 0.87
CHRNA7-227ENST00000637350 GPATCH3Q96I76 525 aa20.49■□□□□ 0.87
CHRNA7-227ENST00000637350 TTC14Q96N46 770 aa20.49■□□□□ 0.87
CHRNA7-227ENST00000637350 ZNF831Q5JPB2 1677 aa20.48■□□□□ 0.87
CHRNA7-227ENST00000637350 RREB1Q92766 1687 aa20.48■□□□□ 0.87
CHRNA7-227ENST00000637350 NUP98P52948 1817 aa20.48■□□□□ 0.87
CHRNA7-227ENST00000637350 CPA1P15085 419 aa20.47■□□□□ 0.87
CHRNA7-227ENST00000637350 PTPN12Q05209 780 aaKnown RBP20.47■□□□□ 0.87
CHRNA7-227ENST00000637350 TBC1D2BQ9UPU7 963 aa20.47■□□□□ 0.87
CHRNA7-227ENST00000637350 MYH14Q7Z406 1995 aaKnown RBP20.47■□□□□ 0.87
CHRNA7-227ENST00000637350 ANKRD36CQ5JPF3 1778 aa20.47■□□□□ 0.87
CHRNA7-227ENST00000637350 BRD1O95696 1058 aa20.47■□□□□ 0.87
CHRNA7-227ENST00000637350 PCCAP05165 728 aaPredicted RBP20.47■□□□□ 0.87
CHRNA7-227ENST00000637350 INTS4Q96HW7 963 aaKnown RBP20.47■□□□□ 0.87
CHRNA7-227ENST00000637350 FAM227BQ96M60 508 aa20.47■□□□□ 0.87
CHRNA7-227ENST00000637350 LARP6Q9BRS8 491 aaKnown RBP20.47■□□□□ 0.87
CHRNA7-227ENST00000637350 EVI5LQ96CN4 794 aa20.46■□□□□ 0.87
CHRNA7-227ENST00000637350 KIAA1211Q6ZU35 1233 aa20.46■□□□□ 0.87
CHRNA7-227ENST00000637350 ZBTB38Q8NAP3 1195 aaPredicted RBP20.46■□□□□ 0.87
CHRNA7-227ENST00000637350 GPT2Q8TD30 523 aa20.46■□□□□ 0.87
CHRNA7-227ENST00000637350 COL5A3P25940 1745 aaPredicted RBP20.45■□□□□ 0.86
CHRNA7-227ENST00000637350 PRPF40AO75400 957 aaKnown RBP20.45■□□□□ 0.86
CHRNA7-227ENST00000637350 AK2P54819 239 aa20.45■□□□□ 0.86
CHRNA7-227ENST00000637350 NLRP10Q86W26 655 aa20.45■□□□□ 0.86
CHRNA7-227ENST00000637350 NHSQ6T4R5 1651 aa20.45■□□□□ 0.86
CHRNA7-227ENST00000637350 RPAP1Q9BWH6 1393 aaPredicted RBP20.45■□□□□ 0.86
CHRNA7-227ENST00000637350 GPTP24298 496 aa20.45■□□□□ 0.86
CHRNA7-227ENST00000637350 ADCK5Q3MIX3 580 aa20.45■□□□□ 0.86
CHRNA7-227ENST00000637350 BOLA2Q9H3K6 86 aa20.45■□□□□ 0.86
CHRNA7-227ENST00000637350 ISY1Q9ULR0 285 aaKnown RBP20.45■□□□□ 0.86
CHRNA7-227ENST00000637350 CHMP3Q9Y3E7 222 aa20.45■□□□□ 0.86
CHRNA7-227ENST00000637350 BTAF1O14981 1849 aa20.44■□□□□ 0.86
CHRNA7-227ENST00000637350 NMIQ13287 307 aaPredicted RBP20.44■□□□□ 0.86
CHRNA7-227ENST00000637350 FAM182BQ5T319 152 aa20.44■□□□□ 0.86
CHRNA7-227ENST00000637350 CAVIN1Q6NZI2 390 aaKnown RBP20.44■□□□□ 0.86
CHRNA7-227ENST00000637350 RUFY3Q7L099 469 aa20.44■□□□□ 0.86
CHRNA7-227ENST00000637350 PTF1AQ7RTS3 328 aa20.44■□□□□ 0.86
CHRNA7-227ENST00000637350 FAM89AQ96GI7 184 aa20.44■□□□□ 0.86
CHRNA7-227ENST00000637350 QTRT2Q9H974 415 aaKnown RBP20.44■□□□□ 0.86
CHRNA7-227ENST00000637350 PRPF40BQ6NWY9 871 aaKnown RBP20.43■□□□□ 0.86
CHRNA7-227ENST00000637350 SEPT12Q8IYM1 358 aa20.43■□□□□ 0.86
CHRNA7-227ENST00000637350 CCDC171Q6TFL3 1326 aa20.43■□□□□ 0.86
CHRNA7-227ENST00000637350 A0A0D9SFI3 127 aa20.43■□□□□ 0.86
CHRNA7-227ENST00000637350 FAM43AQ8N2R8 423 aa20.43■□□□□ 0.86
CHRNA7-227ENST00000637350 RUFY2Q8WXA3 655 aa20.43■□□□□ 0.86
CHRNA7-227ENST00000637350 EDC3Q96F86 508 aaKnown RBP20.43■□□□□ 0.86
CHRNA7-227ENST00000637350 NSFL1CQ9UNZ2 370 aaKnown RBP20.43■□□□□ 0.86
CHRNA7-227ENST00000637350 LARGE1O95461 756 aa20.42■□□□□ 0.86
CHRNA7-227ENST00000637350 CASTP20810 708 aaKnown RBP20.42■□□□□ 0.86
CHRNA7-227ENST00000637350 COL9A3Q14050 684 aaPredicted RBP20.42■□□□□ 0.86
CHRNA7-227ENST00000637350 PLA2G12BQ9BX93 195 aa20.42■□□□□ 0.86
CHRNA7-227ENST00000637350 RBM27Q9P2N5 1060 aaKnown RBP20.42■□□□□ 0.86
CHRNA7-227ENST00000637350 NCLP19338 710 aaKnown RBP20.42■□□□□ 0.86
CHRNA7-227ENST00000637350 RRAGDQ9NQL2 400 aaPredicted RBP20.42■□□□□ 0.86
CHRNA7-227ENST00000637350 CDHR2Q9BYE9 1310 aa20.41■□□□□ 0.86
CHRNA7-227ENST00000637350 ZNF34Q8IZ26 560 aa20.41■□□□□ 0.86
CHRNA7-227ENST00000637350 DBNLQ9UJU6 430 aaKnown RBP20.41■□□□□ 0.86
CHRNA7-227ENST00000637350 TFCP2Q12800 502 aa20.41■□□□□ 0.86
CHRNA7-227ENST00000637350 ZSCAN23Q3MJ62 389 aa20.41■□□□□ 0.86
CHRNA7-227ENST00000637350 LINC00116Q8NCU8 138 aa20.41■□□□□ 0.86
CHRNA7-227ENST00000637350 MED23Q9ULK4 1368 aa20.4■□□□□ 0.86
CHRNA7-227ENST00000637350 SBF2Q86WG5 1849 aa20.4■□□□□ 0.86
CHRNA7-227ENST00000637350 DTNBO60941 627 aa20.4■□□□□ 0.86
CHRNA7-227ENST00000637350 NECTIN1Q15223 517 aa20.4■□□□□ 0.86
CHRNA7-227ENST00000637350 KCNB2Q92953 911 aa20.4■□□□□ 0.86
CHRNA7-227ENST00000637350 NDUFB9Q9Y6M9 179 aa20.4■□□□□ 0.86
CHRNA7-227ENST00000637350 JAKMIP1Q96N16 626 aaKnown RBP20.39■□□□□ 0.86
CHRNA7-227ENST00000637350 FSD1Q9BTV5 496 aa20.39■□□□□ 0.86
CHRNA7-227ENST00000637350 TRMT112Q9UI30 125 aaKnown RBP20.39■□□□□ 0.86
CHRNA7-227ENST00000637350 RBM8AQ9Y5S9 174 aaKnown RBP20.39■□□□□ 0.86
CHRNA7-227ENST00000637350 CAMTA2O94983 1202 aa20.39■□□□□ 0.85
CHRNA7-227ENST00000637350 TNNI3KQ59H18 835 aa20.39■□□□□ 0.85
CHRNA7-227ENST00000637350 FPGT-TNNI3KV9GXZ4 949 aa20.39■□□□□ 0.85
CHRNA7-227ENST00000637350 UBN2Q6ZU65 1347 aa20.39■□□□□ 0.85
CHRNA7-227ENST00000637350 FOXD4L6Q3SYB3 417 aaPredicted RBP20.38■□□□□ 0.85
CHRNA7-227ENST00000637350 FOXD4L3Q6VB84 417 aaPredicted RBP20.38■□□□□ 0.85
CHRNA7-227ENST00000637350 SNRKQ9NRH2 765 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms