RNA–Protein interactions for RNA: ENST00000637128.1

LINC00959-202, Transcript of HCG1648656, isoform CRA_a, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LINC00959, Length 826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-202ENST00000637128 HOXA10P31260 410 aaPredicted RBP16.15■□□□□ 0.18
LINC00959-202ENST00000637128 ZBTB38Q8NAP3 1195 aaPredicted RBP16.15■□□□□ 0.18
LINC00959-202ENST00000637128 CCDC191Q8NCU4 936 aa16.15■□□□□ 0.18
LINC00959-202ENST00000637128 NLRP3Q96P20 1036 aa16.15■□□□□ 0.18
LINC00959-202ENST00000637128 PCCAP05165 728 aaPredicted RBP16.14■□□□□ 0.17
LINC00959-202ENST00000637128 C9orf131Q5VYM1 1079 aa16.14■□□□□ 0.17
LINC00959-202ENST00000637128 ZNF784Q8NCA9 323 aaPredicted RBP16.14■□□□□ 0.17
LINC00959-202ENST00000637128 SPEF2Q9C093 1822 aa16.14■□□□□ 0.17
LINC00959-202ENST00000637128 LRRC37AA6NMS7 1700 aa16.14■□□□□ 0.17
LINC00959-202ENST00000637128 NEXNQ0ZGT2 675 aa16.13■□□□□ 0.17
LINC00959-202ENST00000637128 RBM17Q96I25 401 aaKnown RBP16.13■□□□□ 0.17
LINC00959-202ENST00000637128 DICER1Q9UPY3 1922 aaKnown RBP16.13■□□□□ 0.17
LINC00959-202ENST00000637128 ZBED9Q6R2W3 1325 aa16.13■□□□□ 0.17
LINC00959-202ENST00000637128 PPEF1O14829 653 aaPredicted RBP16.12■□□□□ 0.17
LINC00959-202ENST00000637128 BEND3Q5T5X7 828 aa16.12■□□□□ 0.17
LINC00959-202ENST00000637128 CCDC85AQ96PX6 553 aaPredicted RBP16.12■□□□□ 0.17
LINC00959-202ENST00000637128 CRAMP1Q96RY5 1269 aa16.12■□□□□ 0.17
LINC00959-202ENST00000637128 SMC4Q9NTJ3 1288 aa16.12■□□□□ 0.17
LINC00959-202ENST00000637128 RNF181Q9P0P0 153 aa16.12■□□□□ 0.17
LINC00959-202ENST00000637128 ALDH1B1P30837 517 aa16.11■□□□□ 0.17
LINC00959-202ENST00000637128 GCKRQ14397 625 aa16.11■□□□□ 0.17
LINC00959-202ENST00000637128 UBE3BQ7Z3V4 1068 aa16.11■□□□□ 0.17
LINC00959-202ENST00000637128 LINS1Q8NG48 757 aa16.11■□□□□ 0.17
LINC00959-202ENST00000637128 ZNF526Q8TF50 670 aaPredicted RBP16.11■□□□□ 0.17
LINC00959-202ENST00000637128 COL4A5P29400 1685 aa16.11■□□□□ 0.17
LINC00959-202ENST00000637128 CASP7P55210 303 aa16.1■□□□□ 0.17
LINC00959-202ENST00000637128 CCDC93Q567U6 631 aa16.1■□□□□ 0.17
LINC00959-202ENST00000637128 SLC4A10Q6U841 1118 aa16.1■□□□□ 0.17
LINC00959-202ENST00000637128 CELF1Q92879 486 aaKnown RBP16.1■□□□□ 0.17
LINC00959-202ENST00000637128 CDHR2Q9BYE9 1310 aa16.1■□□□□ 0.17
LINC00959-202ENST00000637128 DUOX1Q9NRD9 1551 aa16.09■□□□□ 0.17
LINC00959-202ENST00000637128 H7C1W4 665 aa16.09■□□□□ 0.17
LINC00959-202ENST00000637128 RARSP54136 660 aaKnown RBP16.09■□□□□ 0.17
LINC00959-202ENST00000637128 SF3B3Q15393 1217 aaKnown RBP16.09■□□□□ 0.17
LINC00959-202ENST00000637128 ALDH1L2Q3SY69 923 aa16.09■□□□□ 0.17
LINC00959-202ENST00000637128 TAOK3Q9H2K8 898 aa16.09■□□□□ 0.17
LINC00959-202ENST00000637128 SEC31BQ9NQW1 1179 aa16.09■□□□□ 0.17
LINC00959-202ENST00000637128 LTBP1Q14766 1721 aa16.08■□□□□ 0.17
LINC00959-202ENST00000637128 LMNB1P20700 586 aa16.08■□□□□ 0.16
LINC00959-202ENST00000637128 EVX2Q03828 476 aa16.08■□□□□ 0.16
LINC00959-202ENST00000637128 GRAPQ13588 217 aa16.08■□□□□ 0.16
LINC00959-202ENST00000637128 DDX46Q7L014 1031 aaKnown RBP16.08■□□□□ 0.16
LINC00959-202ENST00000637128 GRAPLQ8TC17 118 aaPredicted RBP16.08■□□□□ 0.16
LINC00959-202ENST00000637128 ZNF277Q9NRM2 450 aaPredicted RBP16.08■□□□□ 0.16
LINC00959-202ENST00000637128 LTBP3Q9NS15 1303 aa16.08■□□□□ 0.16
LINC00959-202ENST00000637128 PDE8AO60658 829 aa16.07■□□□□ 0.16
LINC00959-202ENST00000637128 CT47B1P0C2W7 299 aaPredicted RBP16.07■□□□□ 0.16
LINC00959-202ENST00000637128 CTSWP56202 376 aa16.07■□□□□ 0.16
LINC00959-202ENST00000637128 SOGA3Q5TF21 947 aa16.07■□□□□ 0.16
LINC00959-202ENST00000637128 PTPRCP08575 1304 aa16.06■□□□□ 0.16
LINC00959-202ENST00000637128 FKBP4Q02790 459 aaKnown RBP eCLIP16.06■□□□□ 0.16
LINC00959-202ENST00000637128 NOB1Q9ULX3 412 aaKnown RBP16.06■□□□□ 0.16
LINC00959-202ENST00000637128 TNNQ9UQP3 1299 aa16.06■□□□□ 0.16
LINC00959-202ENST00000637128 ATP6V0A2Q9Y487 856 aa16.06■□□□□ 0.16
LINC00959-202ENST00000637128 BCAR3O75815 825 aa16.05■□□□□ 0.16
LINC00959-202ENST00000637128 TTLL11Q8NHH1 800 aa16.05■□□□□ 0.16
LINC00959-202ENST00000637128 SRCIN1Q9C0H9 1055 aa16.05■□□□□ 0.16
LINC00959-202ENST00000637128 GREM2Q9H772 168 aa16.05■□□□□ 0.16
LINC00959-202ENST00000637128 FAM161AQ3B820 660 aa16.04■□□□□ 0.16
LINC00959-202ENST00000637128 CCDC152Q4G0S7 254 aa16.04■□□□□ 0.16
LINC00959-202ENST00000637128 EPHA10Q5JZY3 1008 aa16.04■□□□□ 0.16
LINC00959-202ENST00000637128 RTKN2Q8IZC4 609 aa16.04■□□□□ 0.16
LINC00959-202ENST00000637128 GRM8O00222 908 aa16.03■□□□□ 0.16
LINC00959-202ENST00000637128 ALDH1L1O75891 902 aa16.03■□□□□ 0.16
LINC00959-202ENST00000637128 PLA2G12BQ9BX93 195 aa16.03■□□□□ 0.16
LINC00959-202ENST00000637128 A0A1B0GUL6 1792 aa16.03■□□□□ 0.16
LINC00959-202ENST00000637128 ZBTB22O15209 634 aa16.02■□□□□ 0.16
LINC00959-202ENST00000637128 BBOX1O75936 387 aa16.02■□□□□ 0.16
LINC00959-202ENST00000637128 NBPF7P0C2Y1 421 aaPredicted RBP16.02■□□□□ 0.16
LINC00959-202ENST00000637128 BRPF1P55201 1214 aaPredicted RBP16.02■□□□□ 0.16
LINC00959-202ENST00000637128 FOXO4P98177 505 aa16.02■□□□□ 0.16
LINC00959-202ENST00000637128 SP8Q8IXZ3 490 aa16.02■□□□□ 0.16
LINC00959-202ENST00000637128 SUCLG2Q96I99 432 aa16.02■□□□□ 0.16
LINC00959-202ENST00000637128 PSMD1Q99460 953 aa16.02■□□□□ 0.16
LINC00959-202ENST00000637128 IARSP41252 1262 aaKnown RBP16.01■□□□□ 0.15
LINC00959-202ENST00000637128 RPS8P62241 208 aaKnown RBP16.01■□□□□ 0.15
LINC00959-202ENST00000637128 CC2D2BQ6DHV5 1058 aa16.01■□□□□ 0.15
LINC00959-202ENST00000637128 KAZALD1Q96I82 304 aa16.01■□□□□ 0.15
LINC00959-202ENST00000637128 GPR101Q96P66 508 aaPredicted RBP16.01■□□□□ 0.15
LINC00959-202ENST00000637128 GPBP1L1Q9HC44 474 aaPredicted RBP16.01■□□□□ 0.15
LINC00959-202ENST00000637128 NMRK2Q9NPI5 230 aa16.01■□□□□ 0.15
LINC00959-202ENST00000637128 C9orf78Q9NZ63 289 aaPredicted RBP16.01■□□□□ 0.15
LINC00959-202ENST00000637128 RTL9Q8NET4 1388 aa16■□□□□ 0.15
LINC00959-202ENST00000637128 ZNF541Q9H0D2 1346 aa16■□□□□ 0.15
LINC00959-202ENST00000637128 HSP90B1P14625 803 aaKnown RBP16■□□□□ 0.15
LINC00959-202ENST00000637128 GPSM2P81274 684 aa16■□□□□ 0.15
LINC00959-202ENST00000637128 AOC3Q16853 763 aa16■□□□□ 0.15
LINC00959-202ENST00000637128 UTYO14607 1347 aa15.99■□□□□ 0.15
LINC00959-202ENST00000637128 KIF16BQ96L93 1317 aa15.99■□□□□ 0.15
LINC00959-202ENST00000637128 CSF1RP07333 972 aa15.99■□□□□ 0.15
LINC00959-202ENST00000637128 ITGA6P23229 1130 aa15.99■□□□□ 0.15
LINC00959-202ENST00000637128 DPP8Q6V1X1 898 aaPredicted RBP15.99■□□□□ 0.15
LINC00959-202ENST00000637128 MPNDQ8N594 471 aa15.99■□□□□ 0.15
LINC00959-202ENST00000637128 FRAT1Q92837 279 aaPredicted RBP15.99■□□□□ 0.15
LINC00959-202ENST00000637128 ZC3H4Q9UPT8 1303 aaKnown RBP15.98■□□□□ 0.15
LINC00959-202ENST00000637128 WTIPA6NIX2 430 aaPredicted RBP15.98■□□□□ 0.15
LINC00959-202ENST00000637128 TRIM27P14373 513 aa15.98■□□□□ 0.15
LINC00959-202ENST00000637128 LMBR1LQ6UX01 489 aa15.98■□□□□ 0.15
LINC00959-202ENST00000637128 ANKRD18AQ8IVF6 992 aa15.98■□□□□ 0.15
LINC00959-202ENST00000637128 WDR90Q96KV7 1748 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms