RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 ELP1O95163 1332 aa19.13■□□□□ 0.65
CHRNA7-221ENST00000636898 RRP9O43818 475 aaKnown RBP19.13■□□□□ 0.65
CHRNA7-221ENST00000636898 ZNF589Q86UQ0 364 aaPredicted RBP19.13■□□□□ 0.65
CHRNA7-221ENST00000636898 FUCA2Q9BTY2 467 aa19.13■□□□□ 0.65
CHRNA7-221ENST00000636898 CYP27B1O15528 508 aa19.12■□□□□ 0.65
CHRNA7-221ENST00000636898 ATF3P18847 181 aa19.12■□□□□ 0.65
CHRNA7-221ENST00000636898 GLI3P10071 1580 aa19.12■□□□□ 0.65
CHRNA7-221ENST00000636898 KRT85P78386 507 aa19.12■□□□□ 0.65
CHRNA7-221ENST00000636898 DDX54Q8TDD1 881 aaKnown RBP19.12■□□□□ 0.65
CHRNA7-221ENST00000636898 PTMAP06454 111 aaKnown RBP19.11■□□□□ 0.65
CHRNA7-221ENST00000636898 CSB-PGBD3P0DP91 1061 aa19.11■□□□□ 0.65
CHRNA7-221ENST00000636898 TFCP2Q12800 502 aa19.11■□□□□ 0.65
CHRNA7-221ENST00000636898 TOB2Q14106 344 aaPredicted RBP19.11■□□□□ 0.65
CHRNA7-221ENST00000636898 UBE3BQ7Z3V4 1068 aa19.11■□□□□ 0.65
CHRNA7-221ENST00000636898 TICAM2Q86XR7 235 aa19.11■□□□□ 0.65
CHRNA7-221ENST00000636898 PLBD2Q8NHP8 589 aa19.11■□□□□ 0.65
CHRNA7-221ENST00000636898 CASP7P55210 303 aa19.1■□□□□ 0.65
CHRNA7-221ENST00000636898 TNS3Q68CZ2 1445 aa19.1■□□□□ 0.65
CHRNA7-221ENST00000636898 HCLS1P14317 486 aaPredicted RBP19.1■□□□□ 0.65
CHRNA7-221ENST00000636898 HAUS7Q99871 368 aa19.1■□□□□ 0.65
CHRNA7-221ENST00000636898 A0A087WZG4 1122 aa19.09■□□□□ 0.65
CHRNA7-221ENST00000636898 CABP4P57796 275 aa19.09■□□□□ 0.65
CHRNA7-221ENST00000636898 U3KPZ7 1027 aaPredicted RBP19.09■□□□□ 0.65
CHRNA7-221ENST00000636898 CPDO75976 1380 aa19.09■□□□□ 0.65
CHRNA7-221ENST00000636898 COL9A3Q14050 684 aaPredicted RBP19.09■□□□□ 0.65
CHRNA7-221ENST00000636898 CDC37L1Q7L3B6 337 aa19.09■□□□□ 0.65
CHRNA7-221ENST00000636898 USP25Q9UHP3 1055 aa19.09■□□□□ 0.65
CHRNA7-221ENST00000636898 TAF6LQ9Y6J9 622 aa19.09■□□□□ 0.65
CHRNA7-221ENST00000636898 EDC3Q96F86 508 aaKnown RBP19.08■□□□□ 0.64
CHRNA7-221ENST00000636898 SCAND2PQ9GZW5 306 aaPredicted RBP19.08■□□□□ 0.64
CHRNA7-221ENST00000636898 KDM4AO75164 1064 aa19.07■□□□□ 0.64
CHRNA7-221ENST00000636898 KIAA2012Q0VF49 1180 aa19.07■□□□□ 0.64
CHRNA7-221ENST00000636898 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.07■□□□□ 0.64
CHRNA7-221ENST00000636898 ZNF609O15014 1411 aa19.07■□□□□ 0.64
CHRNA7-221ENST00000636898 TMEM94Q12767 1356 aa19.07■□□□□ 0.64
CHRNA7-221ENST00000636898 ADCY5O95622 1261 aa19.07■□□□□ 0.64
CHRNA7-221ENST00000636898 HSP90AA2PQ14568 343 aaPredicted RBP19.07■□□□□ 0.64
CHRNA7-221ENST00000636898 MCMDC2Q4G0Z9 681 aa19.07■□□□□ 0.64
CHRNA7-221ENST00000636898 GIMAP6Q6P9H5 292 aa19.07■□□□□ 0.64
CHRNA7-221ENST00000636898 TTC6Q86TZ1 520 aa19.07■□□□□ 0.64
CHRNA7-221ENST00000636898 NEK1Q96PY6 1258 aa19.07■□□□□ 0.64
CHRNA7-221ENST00000636898 SH3TC1Q8TE82 1336 aa19.06■□□□□ 0.64
CHRNA7-221ENST00000636898 GTF3C6Q969F1 213 aa19.06■□□□□ 0.64
CHRNA7-221ENST00000636898 TCEANC2Q96MN5 208 aa19.06■□□□□ 0.64
CHRNA7-221ENST00000636898 DBNDD2Q9BQY9 259 aa19.06■□□□□ 0.64
CHRNA7-221ENST00000636898 ATP5J2-PTCD1G3V325 749 aa19.05■□□□□ 0.64
CHRNA7-221ENST00000636898 H7C1W4 665 aa19.05■□□□□ 0.64
CHRNA7-221ENST00000636898 PTCD1O75127 700 aaKnown RBP19.05■□□□□ 0.64
CHRNA7-221ENST00000636898 CCDC192P0DO97 292 aa19.05■□□□□ 0.64
CHRNA7-221ENST00000636898 PIP4K2AP48426 406 aaPredicted RBP19.05■□□□□ 0.64
CHRNA7-221ENST00000636898 KBTBD3Q8NAB2 608 aa19.05■□□□□ 0.64
CHRNA7-221ENST00000636898 GPR108Q9NPR9 543 aa19.05■□□□□ 0.64
CHRNA7-221ENST00000636898 PALLDQ8WX93 1383 aa19.05■□□□□ 0.64
CHRNA7-221ENST00000636898 JARID2Q92833 1246 aaPredicted RBP19.05■□□□□ 0.64
CHRNA7-221ENST00000636898 R3HCC1Q9Y3T6 440 aaKnown RBP19.05■□□□□ 0.64
CHRNA7-221ENST00000636898 NUP188Q5SRE5 1749 aa19.04■□□□□ 0.64
CHRNA7-221ENST00000636898 LMBR1LQ6UX01 489 aa19.04■□□□□ 0.64
CHRNA7-221ENST00000636898 UBR2Q8IWV8 1755 aa19.04■□□□□ 0.64
CHRNA7-221ENST00000636898 DTNBO60941 627 aa19.04■□□□□ 0.64
CHRNA7-221ENST00000636898 HMGB1P09429 215 aaKnown RBP19.04■□□□□ 0.64
CHRNA7-221ENST00000636898 FOXO4P98177 505 aa19.04■□□□□ 0.64
CHRNA7-221ENST00000636898 CHRNA2Q15822 529 aa19.04■□□□□ 0.64
CHRNA7-221ENST00000636898 CADPS2Q86UW7 1296 aa19.04■□□□□ 0.64
CHRNA7-221ENST00000636898 FERMT3Q86UX7 667 aa19.04■□□□□ 0.64
CHRNA7-221ENST00000636898 DDX17Q92841 729 aaKnown RBP19.04■□□□□ 0.64
CHRNA7-221ENST00000636898 DNAJC2Q99543 621 aaKnown RBP19.04■□□□□ 0.64
CHRNA7-221ENST00000636898 SPATA31A3Q5VYP0 1347 aa19.03■□□□□ 0.64
CHRNA7-221ENST00000636898 CABLES1Q8TDN4 633 aa19.03■□□□□ 0.64
CHRNA7-221ENST00000636898 CYP21A2P08686 494 aa19.02■□□□□ 0.64
CHRNA7-221ENST00000636898 MAP3K11Q16584 847 aa19.02■□□□□ 0.64
CHRNA7-221ENST00000636898 TPRNQ4KMQ1 711 aa19.02■□□□□ 0.64
CHRNA7-221ENST00000636898 STRCP1A6NGW2 1772 aa19.02■□□□□ 0.64
CHRNA7-221ENST00000636898 NBPF26B4DH59 902 aa19.02■□□□□ 0.63
CHRNA7-221ENST00000636898 NBPF14Q5TI25 921 aa19.02■□□□□ 0.63
CHRNA7-221ENST00000636898 NBPF10Q6P3W6 841 aaKnown RBP19.02■□□□□ 0.63
CHRNA7-221ENST00000636898 NBPF15Q8N660 670 aa19.02■□□□□ 0.63
CHRNA7-221ENST00000636898 PIBF1Q8WXW3 757 aa19.02■□□□□ 0.63
CHRNA7-221ENST00000636898 NUP62CLQ9H1M0 184 aa19.02■□□□□ 0.63
CHRNA7-221ENST00000636898 HELLSQ9NRZ9 838 aa19.02■□□□□ 0.63
CHRNA7-221ENST00000636898 CWC25Q9NXE8 425 aaPredicted RBP19.02■□□□□ 0.63
CHRNA7-221ENST00000636898 TJP1Q07157 1748 aa19.02■□□□□ 0.63
CHRNA7-221ENST00000636898 SPEF2Q9C093 1822 aa19.01■□□□□ 0.63
CHRNA7-221ENST00000636898 IL15P40933 162 aaPredicted RBP19.01■□□□□ 0.63
CHRNA7-221ENST00000636898 Q6ZUG5 572 aa19.01■□□□□ 0.63
CHRNA7-221ENST00000636898 DDX46Q7L014 1031 aaKnown RBP19.01■□□□□ 0.63
CHRNA7-221ENST00000636898 ATG9AQ7Z3C6 839 aa19.01■□□□□ 0.63
CHRNA7-221ENST00000636898 SPATA32Q96LK8 384 aa19.01■□□□□ 0.63
CHRNA7-221ENST00000636898 LLPHQ9BRT6 129 aaKnown RBP19.01■□□□□ 0.63
CHRNA7-221ENST00000636898 PCDH11XQ9BZA7 1347 aa19.01■□□□□ 0.63
CHRNA7-221ENST00000636898 PCDH11YQ9BZA8 1340 aa19.01■□□□□ 0.63
CHRNA7-221ENST00000636898 STK3Q13188 491 aa19.01■□□□□ 0.63
CHRNA7-221ENST00000636898 CCDC129Q6ZRS4 1044 aa19.01■□□□□ 0.63
CHRNA7-221ENST00000636898 LEO1Q8WVC0 666 aaPredicted RBP19.01■□□□□ 0.63
CHRNA7-221ENST00000636898 SEC62Q99442 399 aaKnown RBP19.01■□□□□ 0.63
CHRNA7-221ENST00000636898 DSCC1Q9BVC3 393 aa19.01■□□□□ 0.63
CHRNA7-221ENST00000636898 ATG3Q9NT62 314 aa19.01■□□□□ 0.63
CHRNA7-221ENST00000636898 DDX19AQ9NUU7 478 aaKnown RBP19.01■□□□□ 0.63
CHRNA7-221ENST00000636898 GOLGA6L4A6NEF3 574 aa19■□□□□ 0.63
CHRNA7-221ENST00000636898 ERVV-2B6SEH9 535 aa19■□□□□ 0.63
CHRNA7-221ENST00000636898 SASS6Q6UVJ0 657 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms