RNA–Protein interactions for RNA: ENST00000636340.1

GABRA1-213, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-213ENST00000636340 MX1P20591 662 aa7.56□□□□□ -1.2
GABRA1-213ENST00000636340 NUTM2AQ8IVF1 878 aaPredicted RBP7.56□□□□□ -1.2
GABRA1-213ENST00000636340 TSC1Q92574 1164 aa7.56□□□□□ -1.2
GABRA1-213ENST00000636340 ANP32BQ92688 251 aaKnown RBP7.56□□□□□ -1.2
GABRA1-213ENST00000636340 PNMA3Q9UL41 463 aa7.56□□□□□ -1.2
GABRA1-213ENST00000636340 ZNF500O60304 480 aaPredicted RBP7.56□□□□□ -1.2
GABRA1-213ENST00000636340 GNAI3P08754 354 aa7.56□□□□□ -1.2
GABRA1-213ENST00000636340 UNC5CLQ8IV45 518 aa7.56□□□□□ -1.2
GABRA1-213ENST00000636340 RDH13Q8NBN7 331 aa7.56□□□□□ -1.2
GABRA1-213ENST00000636340 RTF1Q92541 710 aaKnown RBP7.56□□□□□ -1.2
GABRA1-213ENST00000636340 TRAIPQ9BWF2 469 aa7.56□□□□□ -1.2
GABRA1-213ENST00000636340 AMOTL2Q9Y2J4 779 aa7.56□□□□□ -1.2
GABRA1-213ENST00000636340 NWD1Q149M9 1564 aa7.56□□□□□ -1.2
GABRA1-213ENST00000636340 AOX1Q06278 1338 aa7.55□□□□□ -1.2
GABRA1-213ENST00000636340 PXDNLA1KZ92 1463 aa7.55□□□□□ -1.2
GABRA1-213ENST00000636340 EPB41L2O43491 1005 aaKnown RBP7.55□□□□□ -1.2
GABRA1-213ENST00000636340 MBD3O95983 291 aa7.55□□□□□ -1.2
GABRA1-213ENST00000636340 TERF1P54274 439 aa7.55□□□□□ -1.2
GABRA1-213ENST00000636340 HSP90AA2PQ14568 343 aaPredicted RBP7.55□□□□□ -1.2
GABRA1-213ENST00000636340 TMEM259Q4ZIN3 620 aa7.55□□□□□ -1.2
GABRA1-213ENST00000636340 KIAA1211Q6ZU35 1233 aa7.55□□□□□ -1.2
GABRA1-213ENST00000636340 LRRN4Q8WUT4 740 aa7.55□□□□□ -1.2
GABRA1-213ENST00000636340 IL25Q9H293 177 aa7.55□□□□□ -1.2
GABRA1-213ENST00000636340 CHD2O14647 1828 aaKnown RBP7.55□□□□□ -1.2
GABRA1-213ENST00000636340 SOS1Q07889 1333 aaPredicted RBP7.55□□□□□ -1.2
GABRA1-213ENST00000636340 SYCE3A1L190 88 aa7.55□□□□□ -1.2
GABRA1-213ENST00000636340 VAC14Q08AM6 782 aa7.55□□□□□ -1.2
GABRA1-213ENST00000636340 CCDC30Q5VVM6 783 aa7.55□□□□□ -1.2
GABRA1-213ENST00000636340 ZNF710Q8N1W2 664 aa7.55□□□□□ -1.2
GABRA1-213ENST00000636340 TATDN2Q93075 761 aa7.55□□□□□ -1.2
GABRA1-213ENST00000636340 STK31Q9BXU1 1019 aa7.55□□□□□ -1.2
GABRA1-213ENST00000636340 SRCIN1Q9C0H9 1055 aa7.55□□□□□ -1.2
GABRA1-213ENST00000636340 USP44Q9H0E7 712 aa7.55□□□□□ -1.2
GABRA1-213ENST00000636340 LRRFIP2Q9Y608 721 aaKnown RBP7.55□□□□□ -1.2
GABRA1-213ENST00000636340 PIK3C2AO00443 1686 aa7.55□□□□□ -1.2
GABRA1-213ENST00000636340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.54□□□□□ -1.2
GABRA1-213ENST00000636340 MCCP23508 829 aa7.54□□□□□ -1.2
GABRA1-213ENST00000636340 MSNP26038 577 aaKnown RBP7.54□□□□□ -1.2
GABRA1-213ENST00000636340 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.54□□□□□ -1.2
GABRA1-213ENST00000636340 SSH3Q8TE77 659 aa7.54□□□□□ -1.2
GABRA1-213ENST00000636340 SYMPKQ92797 1274 aaKnown RBP7.54□□□□□ -1.2
GABRA1-213ENST00000636340 TRIM34Q9BYJ4 488 aa7.54□□□□□ -1.2
GABRA1-213ENST00000636340 BABAM1Q9NWV8 329 aa7.54□□□□□ -1.2
GABRA1-213ENST00000636340 CACNA1FO60840 1977 aa7.54□□□□□ -1.2
GABRA1-213ENST00000636340 HSPA4P34932 840 aa7.54□□□□□ -1.2
GABRA1-213ENST00000636340 FKBP5Q13451 457 aaPredicted RBP7.54□□□□□ -1.2
GABRA1-213ENST00000636340 HDGFL1Q5TGJ6 251 aa7.54□□□□□ -1.2
GABRA1-213ENST00000636340 FOXD4L5Q5VV16 416 aaPredicted RBP7.54□□□□□ -1.2
GABRA1-213ENST00000636340 IL17REQ8NFR9 667 aa7.54□□□□□ -1.2
GABRA1-213ENST00000636340 FOXD4L4Q8WXT5 416 aaPredicted RBP7.54□□□□□ -1.2
GABRA1-213ENST00000636340 ANO2Q9NQ90 1003 aa7.54□□□□□ -1.2
GABRA1-213ENST00000636340 ZKSCAN5Q9Y2L8 839 aa7.54□□□□□ -1.2
GABRA1-213ENST00000636340 TBX22Q9Y458 520 aa7.54□□□□□ -1.2
GABRA1-213ENST00000636340 MARF1Q9Y4F3 1742 aaKnown RBP7.53□□□□□ -1.2
GABRA1-213ENST00000636340 GNAT3A8MTJ3 354 aa7.53□□□□□ -1.2
GABRA1-213ENST00000636340 SLC10A3P09131 477 aa7.53□□□□□ -1.2
GABRA1-213ENST00000636340 MCM5P33992 734 aa7.53□□□□□ -1.2
GABRA1-213ENST00000636340 RILPL2Q969X0 211 aa7.53□□□□□ -1.2
GABRA1-213ENST00000636340 MTMR7Q9Y216 660 aa7.53□□□□□ -1.2
GABRA1-213ENST00000636340 RPAP1Q9BWH6 1393 aaPredicted RBP7.52□□□□□ -1.2
GABRA1-213ENST00000636340 TRIM6-TRIM34B2RNG4 842 aa7.52□□□□□ -1.2
GABRA1-213ENST00000636340 KDM4AO75164 1064 aa7.52□□□□□ -1.2
GABRA1-213ENST00000636340 DNAJB2P25686 324 aa7.52□□□□□ -1.2
GABRA1-213ENST00000636340 TMEM87AQ8NBN3 555 aa7.52□□□□□ -1.2
GABRA1-213ENST00000636340 PI4K2BQ8TCG2 481 aa7.52□□□□□ -1.2
GABRA1-213ENST00000636340 BCL2L12Q9HB09 334 aa7.52□□□□□ -1.2
GABRA1-213ENST00000636340 CRYBG1Q9Y4K1 1723 aa7.52□□□□□ -1.21
GABRA1-213ENST00000636340 USP54Q70EL1 1684 aa7.52□□□□□ -1.21
GABRA1-213ENST00000636340 DIP2AQ14689 1571 aa7.52□□□□□ -1.21
GABRA1-213ENST00000636340 MAP3K5Q99683 1374 aa7.52□□□□□ -1.21
GABRA1-213ENST00000636340 XIRP1Q702N8 1843 aaKnown RBP7.52□□□□□ -1.21
GABRA1-213ENST00000636340 HOXA2O43364 376 aa7.52□□□□□ -1.21
GABRA1-213ENST00000636340 GADD45BO75293 160 aaPredicted RBP7.52□□□□□ -1.21
GABRA1-213ENST00000636340 AMPHP49418 695 aa7.52□□□□□ -1.21
GABRA1-213ENST00000636340 DIXDC1Q155Q3 683 aa7.52□□□□□ -1.21
GABRA1-213ENST00000636340 TTC14Q96N46 770 aa7.52□□□□□ -1.21
GABRA1-213ENST00000636340 UPF3BQ9BZI7 483 aaKnown RBP7.52□□□□□ -1.21
GABRA1-213ENST00000636340 SEPT9Q9UHD8 586 aaPredicted RBP7.52□□□□□ -1.21
GABRA1-213ENST00000636340 RGPD8O14715 1765 aaPredicted RBP7.52□□□□□ -1.21
GABRA1-213ENST00000636340 SGSM2O43147 1006 aa7.51□□□□□ -1.21
GABRA1-213ENST00000636340 RAB11FIP3O75154 756 aa7.51□□□□□ -1.21
GABRA1-213ENST00000636340 HOXC9P31274 260 aa7.51□□□□□ -1.21
GABRA1-213ENST00000636340 TAF7Q15545 349 aaPredicted RBP7.51□□□□□ -1.21
GABRA1-213ENST00000636340 USP48Q86UV5 1035 aa7.51□□□□□ -1.21
GABRA1-213ENST00000636340 SULF1Q8IWU6 871 aa7.51□□□□□ -1.21
GABRA1-213ENST00000636340 TSPY26PQ9H489 355 aa7.51□□□□□ -1.21
GABRA1-213ENST00000636340 IL1RAPL2Q9NP60 686 aa7.51□□□□□ -1.21
GABRA1-213ENST00000636340 CFAP99D6REC4 459 aa7.51□□□□□ -1.21
GABRA1-213ENST00000636340 UBTFL1P0CB47 393 aaPredicted RBP7.51□□□□□ -1.21
GABRA1-213ENST00000636340 XPCQ01831 940 aaPredicted RBP7.51□□□□□ -1.21
GABRA1-213ENST00000636340 NOL8Q76FK4 1167 aaKnown RBP7.51□□□□□ -1.21
GABRA1-213ENST00000636340 PPP1R42Q7Z4L9 355 aa7.51□□□□□ -1.21
GABRA1-213ENST00000636340 LSG1Q9H089 658 aaKnown RBP7.51□□□□□ -1.21
GABRA1-213ENST00000636340 PDCL3Q9H2J4 239 aa7.51□□□□□ -1.21
GABRA1-213ENST00000636340 PHAXQ9H814 394 aaKnown RBP7.51□□□□□ -1.21
GABRA1-213ENST00000636340 CCDC39Q9UFE4 941 aa7.51□□□□□ -1.21
GABRA1-213ENST00000636340 SNX14Q9Y5W7 946 aa7.51□□□□□ -1.21
GABRA1-213ENST00000636340 MED1Q15648 1581 aaPredicted RBP7.51□□□□□ -1.21
GABRA1-213ENST00000636340 RAD50Q92878 1312 aa7.5□□□□□ -1.21
GABRA1-213ENST00000636340 WDR33Q9C0J8 1336 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms