RNA–Protein interactions for RNA: ENST00000636102.1

ARHGEF9-223, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 2,112 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-223	ENST00000636102	SUCLG2	Q96I99	432 aa		12.86	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	RBSN	Q9H1K0	784 aa		12.86	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	ERC2	O15083	957 aa		12.86	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	GTF2E1	P29083	439 aa	Predicted RBP	12.86	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.86	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	LAMB4	A4D0S4	1761 aa		12.85	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	MCM2	P49736	904 aa		12.85	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	AOX1	Q06278	1338 aa		12.85	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	UBE3B	Q7Z3V4	1068 aa		12.85	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	ISCA1	Q9BUE6	129 aa		12.85	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	LRRC4B	Q9NT99	713 aa		12.85	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	CWC25	Q9NXE8	425 aa	Predicted RBP	12.85	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	CACNA1F	O60840	1977 aa		12.85	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	PDE1A	P54750	535 aa		12.85	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	EPHA10	Q5JZY3	1008 aa		12.85	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	CCDC191	Q8NCU4	936 aa		12.85	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	LRRCC1	Q9C099	1032 aa		12.85	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	ERVV-1	B6SEH8	477 aa		12.84	□□□□□ -0.35
ARHGEF9-223	ENST00000636102		H7C1W4	665 aa		12.84	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	APBB1	O00213	710 aa		12.84	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	SRGAP3	O43295	1099 aa		12.84	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	GPT	P24298	496 aa		12.84	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	KIAA2012	Q0VF49	1180 aa		12.84	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.84	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	BICC1	Q9H694	974 aa	Known RBP	12.84	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	MCC	P23508	829 aa		12.83	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	CASP7	P55210	303 aa		12.83	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	TRIM28	Q13263	835 aa	Known RBP	12.83	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	RC3H1	Q5TC82	1133 aa	Known RBP	12.83	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	SSH3	Q8TE77	659 aa		12.83	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	LMBRD1	Q9NUN5	540 aa		12.83	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	HDAC5	Q9UQL6	1122 aa		12.83	□□□□□ -0.35
ARHGEF9-223	ENST00000636102	TJP1	Q07157	1748 aa		12.83	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	ANAPC15	P60006	121 aa		12.83	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	POLA2	Q14181	598 aa		12.83	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	EXOC6B	Q9Y2D4	811 aa		12.83	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	CNTNAP4	Q9C0A0	1308 aa		12.82	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	RAB11FIP3	O75154	756 aa		12.82	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	RPS6KA4	O75676	772 aa		12.82	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	CAMTA2	O94983	1202 aa		12.82	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	CAVIN1	Q6NZI2	390 aa	Known RBP	12.82	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	LRSAM1	Q6UWE0	723 aa		12.82	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	STAP2	Q9UGK3	403 aa		12.82	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	SALL3	Q9BXA9	1300 aa		12.82	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	GNPAT	O15228	680 aa		12.82	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	CYP2E1	P05181	493 aa	Predicted RBP	12.82	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	MTX1	Q13505	466 aa		12.82	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	NLRP10	Q86W26	655 aa		12.82	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	AMIGO3	Q86WK7	504 aa		12.82	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	PROM2	Q8N271	834 aa		12.82	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	NHS	Q6T4R5	1651 aa		12.82	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	SMARCA5	O60264	1052 aa	Predicted RBP	12.81	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	CD2BP2	O95400	341 aa	Known RBP	12.81	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	APBA3	O96018	575 aa		12.81	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	HSP90AB3P	Q58FF7	597 aa		12.81	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	SYNE4	Q8N205	404 aa		12.81	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	FAM89A	Q96GI7	184 aa		12.81	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	SURF6	O75683	361 aa	Known RBP	12.8	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	ZNF34	Q8IZ26	560 aa		12.8	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	ZNF710	Q8N1W2	664 aa		12.8	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	IL17RA	Q96F46	866 aa		12.8	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	COL15A1	P39059	1388 aa		12.8	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	MX1	P20591	662 aa		12.8	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	FOXO4	P98177	505 aa		12.8	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	OTUD7A	Q8TE49	926 aa	Predicted RBP	12.8	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	RTCB	Q9Y3I0	505 aa	Known RBP	12.8	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	TXNRD1	Q16881	649 aa		12.79	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	HSP90AB4P	Q58FF6	505 aa		12.79	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	MCTP1	Q6DN14	999 aa		12.79	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	ARID3A	Q99856	593 aa		12.79	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	PA2G4	Q9UQ80	394 aa	Known RBP	12.79	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	BTAF1	O14981	1849 aa		12.79	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	UBN2	Q6ZU65	1347 aa		12.79	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	PCCA	P05165	728 aa	Predicted RBP	12.79	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	SLC27A3	Q5K4L6	730 aa		12.79	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	LMBR1L	Q6UX01	489 aa		12.79	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.79	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	IPO4	Q8TEX9	1081 aa	Known RBP	12.79	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	ARHGEF1	Q92888	912 aa	Known RBP	12.79	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	EP400	Q96L91	3159 aa		12.78	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	FAM177B	A6PVY3	158 aa		12.78	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	PHF14	O94880	888 aa		12.78	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	RABL6	Q3YEC7	729 aa	Predicted RBP	12.78	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	SUSD4	Q5VX71	490 aa		12.78	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	KLHDC4	Q8TBB5	520 aa		12.78	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	AK7	Q96M32	723 aa		12.78	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	ESYT1	Q9BSJ8	1104 aa		12.78	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	TMEM51	Q9NW97	253 aa		12.78	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	SRP68	Q9UHB9	627 aa	Known RBP	12.78	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	TRMT112	Q9UI30	125 aa	Known RBP	12.78	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.78	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	BRWD3	Q6RI45	1802 aa		12.78	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	PLSCR1	O15162	318 aa		12.77	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	PDIA4	P13667	645 aa	Known RBP	12.77	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	CBX1	P83916	185 aa		12.77	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	USPL1	Q5W0Q7	1092 aa		12.77	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	PIBF1	Q8WXW3	757 aa		12.77	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	BCL2L12	Q9HB09	334 aa		12.77	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.77	□□□□□ -0.36
ARHGEF9-223	ENST00000636102	KIF3A	Q9Y496	699 aa		12.77	□□□□□ -0.36

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