RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 RAB11FIP3O75154 756 aa11.89□□□□□ -0.51
CACNA1A-223ENST00000636058 SERPINB2P05120 415 aa11.89□□□□□ -0.51
CACNA1A-223ENST00000636058 GTF2E1P29083 439 aaPredicted RBP11.89□□□□□ -0.51
CACNA1A-223ENST00000636058 CCDC57Q2TAC2 916 aa11.89□□□□□ -0.51
CACNA1A-223ENST00000636058 FAM161AQ3B820 660 aa11.89□□□□□ -0.51
CACNA1A-223ENST00000636058 HSP90AB4PQ58FF6 505 aa11.89□□□□□ -0.51
CACNA1A-223ENST00000636058 PRR5LQ6MZQ0 368 aa11.89□□□□□ -0.51
CACNA1A-223ENST00000636058 CHD1LQ86WJ1 897 aa11.89□□□□□ -0.51
CACNA1A-223ENST00000636058 CNBD1Q8NA66 436 aa11.89□□□□□ -0.51
CACNA1A-223ENST00000636058 GREM2Q9H772 168 aa11.89□□□□□ -0.51
CACNA1A-223ENST00000636058 PA2G4Q9UQ80 394 aaKnown RBP11.89□□□□□ -0.51
CACNA1A-223ENST00000636058 CHMP3Q9Y3E7 222 aa11.89□□□□□ -0.51
CACNA1A-223ENST00000636058 LRP5O75197 1615 aa11.89□□□□□ -0.51
CACNA1A-223ENST00000636058 IFIT5Q13325 482 aaKnown RBP11.88□□□□□ -0.51
CACNA1A-223ENST00000636058 SF3B3Q15393 1217 aaKnown RBP11.88□□□□□ -0.51
CACNA1A-223ENST00000636058 ANKRD45Q5TZF3 282 aa11.88□□□□□ -0.51
CACNA1A-223ENST00000636058 ILDR2Q71H61 639 aa11.88□□□□□ -0.51
CACNA1A-223ENST00000636058 SKAP1Q86WV1 359 aa11.88□□□□□ -0.51
CACNA1A-223ENST00000636058 KLHDC4Q8TBB5 520 aa11.88□□□□□ -0.51
CACNA1A-223ENST00000636058 ANKRD18BA2A2Z9 1011 aa11.87□□□□□ -0.51
CACNA1A-223ENST00000636058 MMP10P09238 476 aa11.87□□□□□ -0.51
CACNA1A-223ENST00000636058 ITGA6P23229 1130 aa11.87□□□□□ -0.51
CACNA1A-223ENST00000636058 CCDC152Q4G0S7 254 aa11.87□□□□□ -0.51
CACNA1A-223ENST00000636058 C3orf67Q6ZVT6 689 aa11.87□□□□□ -0.51
CACNA1A-223ENST00000636058 ERC1Q8IUD2 1116 aa11.87□□□□□ -0.51
CACNA1A-223ENST00000636058 RHPN1Q8TCX5 695 aa11.87□□□□□ -0.51
CACNA1A-223ENST00000636058 CCDC85AQ96PX6 553 aaPredicted RBP11.87□□□□□ -0.51
CACNA1A-223ENST00000636058 LRRCC1Q9C099 1032 aa11.87□□□□□ -0.51
CACNA1A-223ENST00000636058 LNPKQ9C0E8 428 aa11.87□□□□□ -0.51
CACNA1A-223ENST00000636058 PDGFDQ9GZP0 370 aaPredicted RBP11.87□□□□□ -0.51
CACNA1A-223ENST00000636058 APBB1O00213 710 aa11.86□□□□□ -0.51
CACNA1A-223ENST00000636058 NPHP1O15259 732 aa11.86□□□□□ -0.51
CACNA1A-223ENST00000636058 CIAO1O76071 339 aa11.86□□□□□ -0.51
CACNA1A-223ENST00000636058 PDE4AP27815 886 aa11.86□□□□□ -0.51
CACNA1A-223ENST00000636058 ST5P78524 1137 aa11.86□□□□□ -0.51
CACNA1A-223ENST00000636058 G3BP1Q13283 466 aaKnown RBP eCLIP11.86□□□□□ -0.51
CACNA1A-223ENST00000636058 MSL1Q68DK7 614 aa11.86□□□□□ -0.51
CACNA1A-223ENST00000636058 CCDC24Q8N4L8 307 aa11.86□□□□□ -0.51
CACNA1A-223ENST00000636058 SLC16A10Q8TF71 515 aa11.86□□□□□ -0.51
CACNA1A-223ENST00000636058 KIF1BPQ96EK5 621 aa11.86□□□□□ -0.51
CACNA1A-223ENST00000636058 ZNF594Q96JF6 807 aaPredicted RBP11.86□□□□□ -0.51
CACNA1A-223ENST00000636058 NLRP3Q96P20 1036 aa11.86□□□□□ -0.51
CACNA1A-223ENST00000636058 SIL1Q9H173 461 aa11.86□□□□□ -0.51
CACNA1A-223ENST00000636058 FBXO3Q9UK99 471 aa11.86□□□□□ -0.51
CACNA1A-223ENST00000636058 ANKRD31Q8N7Z5 1873 aa11.86□□□□□ -0.51
CACNA1A-223ENST00000636058 COL4A1P02462 1669 aa11.85□□□□□ -0.51
CACNA1A-223ENST00000636058 EYA2O00167 538 aa11.85□□□□□ -0.51
CACNA1A-223ENST00000636058 SMARCA5O60264 1052 aaPredicted RBP11.85□□□□□ -0.51
CACNA1A-223ENST00000636058 SASH1O94885 1247 aa11.85□□□□□ -0.51
CACNA1A-223ENST00000636058 OS9Q13438 667 aaPredicted RBP11.85□□□□□ -0.51
CACNA1A-223ENST00000636058 ATG9AQ7Z3C6 839 aa11.85□□□□□ -0.51
CACNA1A-223ENST00000636058 ZBTB47Q9UFB7 747 aaPredicted RBP11.85□□□□□ -0.51
CACNA1A-223ENST00000636058 PARP3Q9Y6F1 533 aa11.85□□□□□ -0.51
CACNA1A-223ENST00000636058 KLRG2A4D1S0 409 aaPredicted RBP11.84□□□□□ -0.51
CACNA1A-223ENST00000636058 IL15P40933 162 aaPredicted RBP11.84□□□□□ -0.51
CACNA1A-223ENST00000636058 CRY2Q49AN0 593 aa11.84□□□□□ -0.51
CACNA1A-223ENST00000636058 TAF7LQ5H9L4 462 aa11.84□□□□□ -0.51
CACNA1A-223ENST00000636058 PUS3Q9BZE2 481 aaKnown RBP11.84□□□□□ -0.51
CACNA1A-223ENST00000636058 SEC31BQ9NQW1 1179 aa11.84□□□□□ -0.51
CACNA1A-223ENST00000636058 SPEF2Q9C093 1822 aa11.83□□□□□ -0.51
CACNA1A-223ENST00000636058 RGS3P49796 1198 aa11.83□□□□□ -0.52
CACNA1A-223ENST00000636058 LRRC24Q50LG9 513 aa11.83□□□□□ -0.52
CACNA1A-223ENST00000636058 BRIP1Q9BX63 1249 aa11.83□□□□□ -0.52
CACNA1A-223ENST00000636058 IL1RAPL2Q9NP60 686 aa11.83□□□□□ -0.52
CACNA1A-223ENST00000636058 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.83□□□□□ -0.52
CACNA1A-223ENST00000636058 SALL3Q9BXA9 1300 aa11.83□□□□□ -0.52
CACNA1A-223ENST00000636058 TAF1P21675 1872 aa11.83□□□□□ -0.52
CACNA1A-223ENST00000636058 TFCP2Q12800 502 aa11.82□□□□□ -0.52
CACNA1A-223ENST00000636058 R3HDM1Q15032 1099 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-223ENST00000636058 LDHAL6AQ6ZMR3 332 aa11.82□□□□□ -0.52
CACNA1A-223ENST00000636058 C16orf71Q8IYS4 520 aaPredicted RBP11.82□□□□□ -0.52
CACNA1A-223ENST00000636058 CLASRPQ8N2M8 674 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-223ENST00000636058 CDC5LQ99459 802 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-223ENST00000636058 RIPOR2Q9Y4F9 1068 aa11.82□□□□□ -0.52
CACNA1A-223ENST00000636058 COL11A2P13942 1736 aaPredicted RBP11.81□□□□□ -0.52
CACNA1A-223ENST00000636058 IGHMBP2P38935 993 aaKnown RBP11.81□□□□□ -0.52
CACNA1A-223ENST00000636058 PLEKHM2Q8IWE5 1019 aa11.81□□□□□ -0.52
CACNA1A-223ENST00000636058 OTUD7AQ8TE49 926 aaPredicted RBP11.81□□□□□ -0.52
CACNA1A-223ENST00000636058 MTFR1LQ9H019 292 aa11.81□□□□□ -0.52
CACNA1A-223ENST00000636058 GPR108Q9NPR9 543 aa11.81□□□□□ -0.52
CACNA1A-223ENST00000636058 A0A1B0GUL6 1792 aa11.81□□□□□ -0.52
CACNA1A-223ENST00000636058 C10orf71Q711Q0 1435 aa11.8□□□□□ -0.52
CACNA1A-223ENST00000636058 HOXA10P31260 410 aaPredicted RBP11.8□□□□□ -0.52
CACNA1A-223ENST00000636058 PDE6BP35913 854 aa11.8□□□□□ -0.52
CACNA1A-223ENST00000636058 TNNI3KQ59H18 835 aa11.8□□□□□ -0.52
CACNA1A-223ENST00000636058 DDX46Q7L014 1031 aaKnown RBP11.8□□□□□ -0.52
CACNA1A-223ENST00000636058 ANKRD18AQ8IVF6 992 aa11.8□□□□□ -0.52
CACNA1A-223ENST00000636058 VGLL2Q8N8G2 317 aa11.8□□□□□ -0.52
CACNA1A-223ENST00000636058 CELF1Q92879 486 aaKnown RBP11.8□□□□□ -0.52
CACNA1A-223ENST00000636058 EAF2Q96CJ1 260 aaPredicted RBP11.8□□□□□ -0.52
CACNA1A-223ENST00000636058 MPHOSPH8Q99549 860 aa11.8□□□□□ -0.52
CACNA1A-223ENST00000636058 OSBPL3Q9H4L5 887 aa11.8□□□□□ -0.52
CACNA1A-223ENST00000636058 CNNM1Q9NRU3 951 aa11.8□□□□□ -0.52
CACNA1A-223ENST00000636058 BSDC1Q9NW68 430 aaPredicted RBP11.8□□□□□ -0.52
CACNA1A-223ENST00000636058 FPGT-TNNI3KV9GXZ4 949 aa11.8□□□□□ -0.52
CACNA1A-223ENST00000636058 MROH5Q6ZUA9 1318 aa11.8□□□□□ -0.52
CACNA1A-223ENST00000636058 KIF13BQ9NQT8 1826 aa11.79□□□□□ -0.52
CACNA1A-223ENST00000636058 ZNF609O15014 1411 aa11.79□□□□□ -0.52
CACNA1A-223ENST00000636058 ZBTB7AO95365 584 aa11.79□□□□□ -0.52
CACNA1A-223ENST00000636058 MX1P20591 662 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms