RNA–Protein interactions for RNA: ENST00000635886.1

C11orf53-202, Transcript of chromosome 11 open reading frame 53, humanhuman

TSL 5

Gene C11orf53, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-202ENST00000635886 F6X3S4 739 aa17.14■□□□□ 0.33
C11orf53-202ENST00000635886 HSP90B1P14625 803 aaKnown RBP17.14■□□□□ 0.33
C11orf53-202ENST00000635886 GRIPAP1Q4V328 841 aa17.14■□□□□ 0.33
C11orf53-202ENST00000635886 CDHR2Q9BYE9 1310 aa17.14■□□□□ 0.33
C11orf53-202ENST00000635886 PDE8AO60658 829 aa17.13■□□□□ 0.33
C11orf53-202ENST00000635886 IARSP41252 1262 aaKnown RBP17.13■□□□□ 0.33
C11orf53-202ENST00000635886 SP8Q8IXZ3 490 aa17.13■□□□□ 0.33
C11orf53-202ENST00000635886 LINS1Q8NG48 757 aa17.13■□□□□ 0.33
C11orf53-202ENST00000635886 CELF1Q92879 486 aaKnown RBP17.13■□□□□ 0.33
C11orf53-202ENST00000635886 TMX4Q9H1E5 349 aaPredicted RBP17.13■□□□□ 0.33
C11orf53-202ENST00000635886 TAF1P21675 1872 aa17.13■□□□□ 0.33
C11orf53-202ENST00000635886 H7C1W4 665 aa17.12■□□□□ 0.33
C11orf53-202ENST00000635886 GCKRQ14397 625 aa17.12■□□□□ 0.33
C11orf53-202ENST00000635886 MRPL50Q8N5N7 158 aaKnown RBP17.12■□□□□ 0.33
C11orf53-202ENST00000635886 RRAGCQ9HB90 399 aa17.12■□□□□ 0.33
C11orf53-202ENST00000635886 COL4A1P02462 1669 aa17.12■□□□□ 0.33
C11orf53-202ENST00000635886 CCDC152Q4G0S7 254 aa17.11■□□□□ 0.33
C11orf53-202ENST00000635886 UBE3BQ7Z3V4 1068 aa17.11■□□□□ 0.33
C11orf53-202ENST00000635886 TMC4Q7Z404 712 aa17.11■□□□□ 0.33
C11orf53-202ENST00000635886 SSH1Q8WYL5 1049 aa17.11■□□□□ 0.33
C11orf53-202ENST00000635886 CCDC85AQ96PX6 553 aaPredicted RBP17.11■□□□□ 0.33
C11orf53-202ENST00000635886 SEC31BQ9NQW1 1179 aa17.11■□□□□ 0.33
C11orf53-202ENST00000635886 BEND3Q5T5X7 828 aa17.1■□□□□ 0.33
C11orf53-202ENST00000635886 DPY19L2Q6NUT2 758 aa17.1■□□□□ 0.33
C11orf53-202ENST00000635886 CASP7P55210 303 aa17.09■□□□□ 0.33
C11orf53-202ENST00000635886 CTSWP56202 376 aa17.09■□□□□ 0.33
C11orf53-202ENST00000635886 RPS8P62241 208 aaKnown RBP17.09■□□□□ 0.33
C11orf53-202ENST00000635886 DPP8Q6V1X1 898 aaPredicted RBP17.09■□□□□ 0.33
C11orf53-202ENST00000635886 MPNDQ8N594 471 aa17.09■□□□□ 0.33
C11orf53-202ENST00000635886 BCL2L13Q9BXK5 485 aa17.09■□□□□ 0.33
C11orf53-202ENST00000635886 COL4A5P29400 1685 aa17.09■□□□□ 0.33
C11orf53-202ENST00000635886 ZNF541Q9H0D2 1346 aa17.08■□□□□ 0.32
C11orf53-202ENST00000635886 DDNO94850 711 aaPredicted RBP17.08■□□□□ 0.32
C11orf53-202ENST00000635886 HNRNPUQ00839 825 aaKnown RBP eCLIP17.08■□□□□ 0.32
C11orf53-202ENST00000635886 LARGE2Q8N3Y3 721 aa17.08■□□□□ 0.32
C11orf53-202ENST00000635886 TTLL11Q8NHH1 800 aa17.08■□□□□ 0.32
C11orf53-202ENST00000635886 JDP2Q8WYK2 163 aa17.08■□□□□ 0.32
C11orf53-202ENST00000635886 RTFDC1Q9BY42 306 aaPredicted RBP17.08■□□□□ 0.32
C11orf53-202ENST00000635886 LRRC37AA6NMS7 1700 aa17.07■□□□□ 0.32
C11orf53-202ENST00000635886 FZD9O00144 591 aa17.07■□□□□ 0.32
C11orf53-202ENST00000635886 PPIP5K2O43314 1243 aa17.07■□□□□ 0.32
C11orf53-202ENST00000635886 TOMM70O94826 608 aa17.07■□□□□ 0.32
C11orf53-202ENST00000635886 SLC4A10Q6U841 1118 aa17.07■□□□□ 0.32
C11orf53-202ENST00000635886 SUPT20HQ8NEM7 779 aa17.07■□□□□ 0.32
C11orf53-202ENST00000635886 PLA2G12BQ9BX93 195 aa17.07■□□□□ 0.32
C11orf53-202ENST00000635886 POTECB2RU33 542 aa17.06■□□□□ 0.32
C11orf53-202ENST00000635886 VEGFAP15692 232 aaPredicted RBP17.06■□□□□ 0.32
C11orf53-202ENST00000635886 AOC3Q16853 763 aa17.06■□□□□ 0.32
C11orf53-202ENST00000635886 ALDH1L2Q3SY69 923 aa17.06■□□□□ 0.32
C11orf53-202ENST00000635886 GREM2Q9H772 168 aa17.06■□□□□ 0.32
C11orf53-202ENST00000635886 NSFL1CQ9UNZ2 370 aaKnown RBP17.06■□□□□ 0.32
C11orf53-202ENST00000635886 DUOX1Q9NRD9 1551 aa17.06■□□□□ 0.32
C11orf53-202ENST00000635886 WDR90Q96KV7 1748 aa17.05■□□□□ 0.32
C11orf53-202ENST00000635886 PTPRCP08575 1304 aa17.05■□□□□ 0.32
C11orf53-202ENST00000635886 CT47B1P0C2W7 299 aaPredicted RBP17.05■□□□□ 0.32
C11orf53-202ENST00000635886 GPSM2P81274 684 aa17.05■□□□□ 0.32
C11orf53-202ENST00000635886 C16orf71Q8IYS4 520 aaPredicted RBP17.05■□□□□ 0.32
C11orf53-202ENST00000635886 SRCIN1Q9C0H9 1055 aa17.05■□□□□ 0.32
C11orf53-202ENST00000635886 SMC4Q9NTJ3 1288 aa17.05■□□□□ 0.32
C11orf53-202ENST00000635886 RTL9Q8NET4 1388 aa17.04■□□□□ 0.32
C11orf53-202ENST00000635886 GRM8O00222 908 aa17.04■□□□□ 0.32
C11orf53-202ENST00000635886 ALDH1L1O75891 902 aa17.04■□□□□ 0.32
C11orf53-202ENST00000635886 ANKRD18AQ8IVF6 992 aa17.04■□□□□ 0.32
C11orf53-202ENST00000635886 NIM1KQ8IY84 436 aa17.04■□□□□ 0.32
C11orf53-202ENST00000635886 VPS33BQ9H267 617 aa17.04■□□□□ 0.32
C11orf53-202ENST00000635886 MYH3P11055 1940 aa17.04■□□□□ 0.32
C11orf53-202ENST00000635886 EIF6P56537 245 aaKnown RBP17.03■□□□□ 0.32
C11orf53-202ENST00000635886 KIAA2012Q0VF49 1180 aa17.03■□□□□ 0.32
C11orf53-202ENST00000635886 RBM46Q8TBY0 533 aaKnown RBP17.03■□□□□ 0.32
C11orf53-202ENST00000635886 L3MBTL3Q96JM7 780 aaPredicted RBP17.03■□□□□ 0.32
C11orf53-202ENST00000635886 CDC5LQ99459 802 aaKnown RBP17.03■□□□□ 0.32
C11orf53-202ENST00000635886 CSF1RP07333 972 aa17.02■□□□□ 0.32
C11orf53-202ENST00000635886 FAM161AQ3B820 660 aa17.02■□□□□ 0.32
C11orf53-202ENST00000635886 C9orf78Q9NZ63 289 aaPredicted RBP17.02■□□□□ 0.32
C11orf53-202ENST00000635886 POLLQ9UGP5 575 aa17.02■□□□□ 0.32
C11orf53-202ENST00000635886 LTBP1Q14766 1721 aa17.01■□□□□ 0.31
C11orf53-202ENST00000635886 C6orf229H3BNL8 230 aa17.01■□□□□ 0.31
C11orf53-202ENST00000635886 ITGA6P23229 1130 aa17.01■□□□□ 0.31
C11orf53-202ENST00000635886 FOXO4P98177 505 aa17.01■□□□□ 0.31
C11orf53-202ENST00000635886 GPC2Q8N158 579 aa17.01■□□□□ 0.31
C11orf53-202ENST00000635886 TBC1D16Q8TBP0 767 aa17.01■□□□□ 0.31
C11orf53-202ENST00000635886 PODXL2Q9NZ53 605 aa17.01■□□□□ 0.31
C11orf53-202ENST00000635886 ZNRF3Q9ULT6 936 aa17.01■□□□□ 0.31
C11orf53-202ENST00000635886 GJA3Q9Y6H8 435 aa17.01■□□□□ 0.31
C11orf53-202ENST00000635886 RARSP54136 660 aaKnown RBP17■□□□□ 0.31
C11orf53-202ENST00000635886 WASHC4Q2M389 1173 aa17■□□□□ 0.31
C11orf53-202ENST00000635886 EPHA10Q5JZY3 1008 aa17■□□□□ 0.31
C11orf53-202ENST00000635886 GPR101Q96P66 508 aaPredicted RBP17■□□□□ 0.31
C11orf53-202ENST00000635886 ANKIB1Q9P2G1 1089 aa17■□□□□ 0.31
C11orf53-202ENST00000635886 IQCA1LA6NCM1 817 aa16.99■□□□□ 0.31
C11orf53-202ENST00000635886 RIMBP2O15034 1052 aa16.99■□□□□ 0.31
C11orf53-202ENST00000635886 UFL1O94874 794 aa16.99■□□□□ 0.31
C11orf53-202ENST00000635886 BRPF1P55201 1214 aaPredicted RBP16.99■□□□□ 0.31
C11orf53-202ENST00000635886 BSDC1Q9NW68 430 aaPredicted RBP16.99■□□□□ 0.31
C11orf53-202ENST00000635886 NOB1Q9ULX3 412 aaKnown RBP16.99■□□□□ 0.31
C11orf53-202ENST00000635886 XDHP47989 1333 aa16.98■□□□□ 0.31
C11orf53-202ENST00000635886 NBPF7P0C2Y1 421 aaPredicted RBP16.98■□□□□ 0.31
C11orf53-202ENST00000635886 HSPA6P17066 643 aa16.98■□□□□ 0.31
C11orf53-202ENST00000635886 IGHMBP2P38935 993 aaKnown RBP16.98■□□□□ 0.31
C11orf53-202ENST00000635886 CXCL9Q07325 125 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms