RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 IPO8O15397 1037 aaKnown RBP12.32□□□□□ -0.44
LINC00339-210ENST00000635675 TAF1P21675 1872 aa12.32□□□□□ -0.44
LINC00339-210ENST00000635675 CTSWP56202 376 aa12.32□□□□□ -0.44
LINC00339-210ENST00000635675 GRAPQ13588 217 aa12.32□□□□□ -0.44
LINC00339-210ENST00000635675 FER1L6Q2WGJ9 1857 aa12.32□□□□□ -0.44
LINC00339-210ENST00000635675 TTLL11Q8NHH1 800 aa12.32□□□□□ -0.44
LINC00339-210ENST00000635675 GRAPLQ8TC17 118 aaPredicted RBP12.32□□□□□ -0.44
LINC00339-210ENST00000635675 C9orf78Q9NZ63 289 aaPredicted RBP12.32□□□□□ -0.44
LINC00339-210ENST00000635675 UTYO14607 1347 aa12.31□□□□□ -0.44
LINC00339-210ENST00000635675 PPEF1O14829 653 aaPredicted RBP12.31□□□□□ -0.44
LINC00339-210ENST00000635675 PRELPP51888 382 aa12.31□□□□□ -0.44
LINC00339-210ENST00000635675 CCDC152Q4G0S7 254 aa12.31□□□□□ -0.44
LINC00339-210ENST00000635675 CCDC93Q567U6 631 aa12.31□□□□□ -0.44
LINC00339-210ENST00000635675 CC2D2BQ6DHV5 1058 aa12.31□□□□□ -0.44
LINC00339-210ENST00000635675 ATP6V0A2Q9Y487 856 aa12.31□□□□□ -0.44
LINC00339-210ENST00000635675 SBF1O95248 1867 aa12.31□□□□□ -0.44
LINC00339-210ENST00000635675 SNED1Q8TER0 1413 aa12.3□□□□□ -0.44
LINC00339-210ENST00000635675 LTBP3Q9NS15 1303 aa12.3□□□□□ -0.44
LINC00339-210ENST00000635675 MYH3P11055 1940 aa12.3□□□□□ -0.44
LINC00339-210ENST00000635675 CSF1RP07333 972 aa12.3□□□□□ -0.44
LINC00339-210ENST00000635675 NBPF7P0C2Y1 421 aaPredicted RBP12.3□□□□□ -0.44
LINC00339-210ENST00000635675 TRIM27P14373 513 aa12.3□□□□□ -0.44
LINC00339-210ENST00000635675 YY1P25490 414 aa12.3□□□□□ -0.44
LINC00339-210ENST00000635675 CCT4P50991 539 aaKnown RBP12.3□□□□□ -0.44
LINC00339-210ENST00000635675 FOXO4P98177 505 aa12.3□□□□□ -0.44
LINC00339-210ENST00000635675 ATF7IPQ6VMQ6 1270 aa12.3□□□□□ -0.44
LINC00339-210ENST00000635675 SLC51AQ86UW1 340 aa12.3□□□□□ -0.44
LINC00339-210ENST00000635675 SP8Q8IXZ3 490 aa12.3□□□□□ -0.44
LINC00339-210ENST00000635675 RTKN2Q8IZC4 609 aa12.3□□□□□ -0.44
LINC00339-210ENST00000635675 FRAT1Q92837 279 aaPredicted RBP12.3□□□□□ -0.44
LINC00339-210ENST00000635675 CELF1Q92879 486 aaKnown RBP12.3□□□□□ -0.44
LINC00339-210ENST00000635675 CCDC85AQ96PX6 553 aaPredicted RBP12.3□□□□□ -0.44
LINC00339-210ENST00000635675 USP44Q9H0E7 712 aa12.3□□□□□ -0.44
LINC00339-210ENST00000635675 SEC31BQ9NQW1 1179 aa12.3□□□□□ -0.44
LINC00339-210ENST00000635675 COL4A1P02462 1669 aa12.3□□□□□ -0.44
LINC00339-210ENST00000635675 RTL9Q8NET4 1388 aa12.3□□□□□ -0.44
LINC00339-210ENST00000635675 LMNB1P20700 586 aa12.29□□□□□ -0.44
LINC00339-210ENST00000635675 RPS8P62241 208 aaKnown RBP12.29□□□□□ -0.44
LINC00339-210ENST00000635675 RASSF7Q02833 373 aa12.29□□□□□ -0.44
LINC00339-210ENST00000635675 GRIPAP1Q4V328 841 aa12.29□□□□□ -0.44
LINC00339-210ENST00000635675 C9orf131Q5VYM1 1079 aa12.29□□□□□ -0.44
LINC00339-210ENST00000635675 TMC4Q7Z404 712 aa12.29□□□□□ -0.44
LINC00339-210ENST00000635675 TAOK3Q9H2K8 898 aa12.29□□□□□ -0.44
LINC00339-210ENST00000635675 EPHA10Q5JZY3 1008 aa12.28□□□□□ -0.44
LINC00339-210ENST00000635675 ZKSCAN2Q63HK3 967 aa12.28□□□□□ -0.44
LINC00339-210ENST00000635675 INTS3Q68E01 1043 aaKnown RBP12.28□□□□□ -0.44
LINC00339-210ENST00000635675 KAZALD1Q96I82 304 aa12.28□□□□□ -0.44
LINC00339-210ENST00000635675 GREM2Q9H772 168 aa12.28□□□□□ -0.44
LINC00339-210ENST00000635675 TNNQ9UQP3 1299 aa12.28□□□□□ -0.44
LINC00339-210ENST00000635675 FKBP4Q02790 459 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC00339-210ENST00000635675 SUCLG2Q96I99 432 aa12.28□□□□□ -0.44
LINC00339-210ENST00000635675 PSMD1Q99460 953 aa12.28□□□□□ -0.44
LINC00339-210ENST00000635675 RCAN3Q9UKA8 241 aa12.28□□□□□ -0.44
LINC00339-210ENST00000635675 CCDC88AQ3V6T2 1871 aa12.27□□□□□ -0.44
LINC00339-210ENST00000635675 FAM161AQ3B820 660 aa12.27□□□□□ -0.45
LINC00339-210ENST00000635675 LMBR1LQ6UX01 489 aa12.27□□□□□ -0.45
LINC00339-210ENST00000635675 CLUAP1Q96AJ1 413 aa12.27□□□□□ -0.45
LINC00339-210ENST00000635675 TMX4Q9H1E5 349 aaPredicted RBP12.27□□□□□ -0.45
LINC00339-210ENST00000635675 RNF181Q9P0P0 153 aa12.27□□□□□ -0.45
LINC00339-210ENST00000635675 LRRC37AA6NMS7 1700 aa12.26□□□□□ -0.45
LINC00339-210ENST00000635675 ITGA6P23229 1130 aa12.26□□□□□ -0.45
LINC00339-210ENST00000635675 ANKRD18AQ8IVF6 992 aa12.26□□□□□ -0.45
LINC00339-210ENST00000635675 MPNDQ8N594 471 aa12.26□□□□□ -0.45
LINC00339-210ENST00000635675 CDC5LQ99459 802 aaKnown RBP12.26□□□□□ -0.45
LINC00339-210ENST00000635675 RTFDC1Q9BY42 306 aaPredicted RBP12.26□□□□□ -0.45
LINC00339-210ENST00000635675 ZNF277Q9NRM2 450 aaPredicted RBP12.26□□□□□ -0.45
LINC00339-210ENST00000635675 RABL6Q3YEC7 729 aaPredicted RBP12.25□□□□□ -0.45
LINC00339-210ENST00000635675 ANKRD44Q8N8A2 993 aa12.25□□□□□ -0.45
LINC00339-210ENST00000635675 BICC1Q9H694 974 aaKnown RBP12.25□□□□□ -0.45
LINC00339-210ENST00000635675 BSDC1Q9NW68 430 aaPredicted RBP12.25□□□□□ -0.45
LINC00339-210ENST00000635675 DICER1Q9UPY3 1922 aaKnown RBP12.24□□□□□ -0.45
LINC00339-210ENST00000635675 ANKRD18BA2A2Z9 1011 aa12.24□□□□□ -0.45
LINC00339-210ENST00000635675 IFIT5Q13325 482 aaKnown RBP12.24□□□□□ -0.45
LINC00339-210ENST00000635675 DPP8Q6V1X1 898 aaPredicted RBP12.24□□□□□ -0.45
LINC00339-210ENST00000635675 DZIP1LQ8IYY4 767 aaKnown RBP12.24□□□□□ -0.45
LINC00339-210ENST00000635675 TMEM57Q8N5G2 664 aa12.24□□□□□ -0.45
LINC00339-210ENST00000635675 MEIS3Q99687 375 aa12.24□□□□□ -0.45
LINC00339-210ENST00000635675 NSFL1CQ9UNZ2 370 aaKnown RBP12.24□□□□□ -0.45
LINC00339-210ENST00000635675 ZC3H4Q9UPT8 1303 aaKnown RBP12.23□□□□□ -0.45
LINC00339-210ENST00000635675 UBTFL1P0CB47 393 aaPredicted RBP12.23□□□□□ -0.45
LINC00339-210ENST00000635675 RLBP1P12271 317 aa12.23□□□□□ -0.45
LINC00339-210ENST00000635675 IARSP41252 1262 aaKnown RBP12.23□□□□□ -0.45
LINC00339-210ENST00000635675 GPSM2P81274 684 aa12.23□□□□□ -0.45
LINC00339-210ENST00000635675 ZNF784Q8NCA9 323 aaPredicted RBP12.23□□□□□ -0.45
LINC00339-210ENST00000635675 SUPT20HQ8NEM7 779 aa12.23□□□□□ -0.45
LINC00339-210ENST00000635675 VPS33BQ9H267 617 aa12.23□□□□□ -0.45
LINC00339-210ENST00000635675 PODXL2Q9NZ53 605 aa12.23□□□□□ -0.45
LINC00339-210ENST00000635675 MINPP1Q9UNW1 487 aa12.23□□□□□ -0.45
LINC00339-210ENST00000635675 CHMP3Q9Y3E7 222 aa12.23□□□□□ -0.45
LINC00339-210ENST00000635675 GNAI3P08754 354 aa12.22□□□□□ -0.45
LINC00339-210ENST00000635675 IGHMBP2P38935 993 aaKnown RBP12.22□□□□□ -0.45
LINC00339-210ENST00000635675 CCDC57Q2TAC2 916 aa12.22□□□□□ -0.45
LINC00339-210ENST00000635675 POLLQ9UGP5 575 aa12.22□□□□□ -0.45
LINC00339-210ENST00000635675 HDAC5Q9UQL6 1122 aa12.22□□□□□ -0.45
LINC00339-210ENST00000635675 LTBP1Q14766 1721 aa12.22□□□□□ -0.45
LINC00339-210ENST00000635675 DUOX1Q9NRD9 1551 aa12.22□□□□□ -0.45
LINC00339-210ENST00000635675 SPEF2Q9C093 1822 aa12.21□□□□□ -0.45
LINC00339-210ENST00000635675 CENPBP07199 599 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-210ENST00000635675 FTSJ3Q8IY81 847 aaKnown RBP12.21□□□□□ -0.45
LINC00339-210ENST00000635675 TBC1D16Q8TBP0 767 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms