RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 SP8Q8IXZ3 490 aa19.98■□□□□ 0.79
LINC00339-207ENST00000634712 RRAGCQ9HB90 399 aa19.98■□□□□ 0.79
LINC00339-207ENST00000634712 LAMB2P55268 1798 aa19.98■□□□□ 0.79
LINC00339-207ENST00000634712 CCDC152Q4G0S7 254 aa19.97■□□□□ 0.79
LINC00339-207ENST00000634712 LINS1Q8NG48 757 aa19.97■□□□□ 0.79
LINC00339-207ENST00000634712 JDP2Q8WYK2 163 aa19.97■□□□□ 0.79
LINC00339-207ENST00000634712 DDX60Q8IY21 1712 aaKnown RBP19.97■□□□□ 0.79
LINC00339-207ENST00000634712 KIF3CO14782 793 aa19.96■□□□□ 0.79
LINC00339-207ENST00000634712 CDHR2Q9BYE9 1310 aa19.96■□□□□ 0.79
LINC00339-207ENST00000634712 F6X3S4 739 aa19.95■□□□□ 0.79
LINC00339-207ENST00000634712 GCKRQ14397 625 aa19.95■□□□□ 0.79
LINC00339-207ENST00000634712 DPP8Q6V1X1 898 aaPredicted RBP19.95■□□□□ 0.79
LINC00339-207ENST00000634712 MPNDQ8N594 471 aa19.95■□□□□ 0.79
LINC00339-207ENST00000634712 SUPT20HQ8NEM7 779 aa19.95■□□□□ 0.79
LINC00339-207ENST00000634712 DICER1Q9UPY3 1922 aaKnown RBP19.95■□□□□ 0.78
LINC00339-207ENST00000634712 RPS8P62241 208 aaKnown RBP19.95■□□□□ 0.78
LINC00339-207ENST00000634712 UBE3BQ7Z3V4 1068 aa19.95■□□□□ 0.78
LINC00339-207ENST00000634712 LARGE2Q8N3Y3 721 aa19.95■□□□□ 0.78
LINC00339-207ENST00000634712 CELF1Q92879 486 aaKnown RBP19.95■□□□□ 0.78
LINC00339-207ENST00000634712 CCDC85AQ96PX6 553 aaPredicted RBP19.95■□□□□ 0.78
LINC00339-207ENST00000634712 TIAM2Q8IVF5 1701 aa19.94■□□□□ 0.78
LINC00339-207ENST00000634712 H7C1W4 665 aa19.94■□□□□ 0.78
LINC00339-207ENST00000634712 SLC4A10Q6U841 1118 aa19.94■□□□□ 0.78
LINC00339-207ENST00000634712 TRMT2AQ8IZ69 625 aaKnown RBP19.94■□□□□ 0.78
LINC00339-207ENST00000634712 TOMM70O94826 608 aa19.93■□□□□ 0.78
LINC00339-207ENST00000634712 VEGFAP15692 232 aaPredicted RBP19.93■□□□□ 0.78
LINC00339-207ENST00000634712 MRPL50Q8N5N7 158 aaKnown RBP19.93■□□□□ 0.78
LINC00339-207ENST00000634712 PPIP5K2O43314 1243 aa19.92■□□□□ 0.78
LINC00339-207ENST00000634712 CTSWP56202 376 aa19.92■□□□□ 0.78
LINC00339-207ENST00000634712 HNRNPUQ00839 825 aaKnown RBP eCLIP19.92■□□□□ 0.78
LINC00339-207ENST00000634712 BEND3Q5T5X7 828 aa19.92■□□□□ 0.78
LINC00339-207ENST00000634712 SLC51AQ86UW1 340 aa19.92■□□□□ 0.78
LINC00339-207ENST00000634712 SSH1Q8WYL5 1049 aa19.92■□□□□ 0.78
LINC00339-207ENST00000634712 VPS33BQ9H267 617 aa19.92■□□□□ 0.78
LINC00339-207ENST00000634712 SEC31BQ9NQW1 1179 aa19.92■□□□□ 0.78
LINC00339-207ENST00000634712 SNED1Q8TER0 1413 aa19.91■□□□□ 0.78
LINC00339-207ENST00000634712 DDNO94850 711 aaPredicted RBP19.91■□□□□ 0.78
LINC00339-207ENST00000634712 CT47B1P0C2W7 299 aaPredicted RBP19.91■□□□□ 0.78
LINC00339-207ENST00000634712 EIF6P56537 245 aaKnown RBP19.91■□□□□ 0.78
LINC00339-207ENST00000634712 ALDH1L2Q3SY69 923 aa19.91■□□□□ 0.78
LINC00339-207ENST00000634712 NSFL1CQ9UNZ2 370 aaKnown RBP19.91■□□□□ 0.78
LINC00339-207ENST00000634712 TAF1P21675 1872 aa19.91■□□□□ 0.78
LINC00339-207ENST00000634712 ANKRD18AQ8IVF6 992 aa19.9■□□□□ 0.78
LINC00339-207ENST00000634712 NIM1KQ8IY84 436 aa19.9■□□□□ 0.78
LINC00339-207ENST00000634712 TTLL11Q8NHH1 800 aa19.9■□□□□ 0.78
LINC00339-207ENST00000634712 CDC5LQ99459 802 aaKnown RBP19.9■□□□□ 0.78
LINC00339-207ENST00000634712 RTFDC1Q9BY42 306 aaPredicted RBP19.9■□□□□ 0.78
LINC00339-207ENST00000634712 SRCIN1Q9C0H9 1055 aa19.9■□□□□ 0.78
LINC00339-207ENST00000634712 SMC4Q9NTJ3 1288 aa19.9■□□□□ 0.78
LINC00339-207ENST00000634712 FZD9O00144 591 aa19.89■□□□□ 0.77
LINC00339-207ENST00000634712 AOC3Q16853 763 aa19.89■□□□□ 0.77
LINC00339-207ENST00000634712 BCL2L13Q9BXK5 485 aa19.89■□□□□ 0.77
LINC00339-207ENST00000634712 C9orf78Q9NZ63 289 aaPredicted RBP19.89■□□□□ 0.77
LINC00339-207ENST00000634712 PTPRCP08575 1304 aa19.89■□□□□ 0.77
LINC00339-207ENST00000634712 ALDH1L1O75891 902 aa19.88■□□□□ 0.77
LINC00339-207ENST00000634712 C6orf229H3BNL8 230 aa19.87■□□□□ 0.77
LINC00339-207ENST00000634712 RBM46Q8TBY0 533 aaKnown RBP19.87■□□□□ 0.77
LINC00339-207ENST00000634712 PLA2G12BQ9BX93 195 aa19.87■□□□□ 0.77
LINC00339-207ENST00000634712 GREM2Q9H772 168 aa19.87■□□□□ 0.77
LINC00339-207ENST00000634712 ANKIB1Q9P2G1 1089 aa19.87■□□□□ 0.77
LINC00339-207ENST00000634712 IQCA1LA6NCM1 817 aa19.86■□□□□ 0.77
LINC00339-207ENST00000634712 CASP7P55210 303 aa19.86■□□□□ 0.77
LINC00339-207ENST00000634712 GPSM2P81274 684 aa19.86■□□□□ 0.77
LINC00339-207ENST00000634712 ZNF541Q9H0D2 1346 aa19.86■□□□□ 0.77
LINC00339-207ENST00000634712 GJA3Q9Y6H8 435 aa19.86■□□□□ 0.77
LINC00339-207ENST00000634712 GRM8O00222 908 aa19.85■□□□□ 0.77
LINC00339-207ENST00000634712 KIAA2012Q0VF49 1180 aa19.85■□□□□ 0.77
LINC00339-207ENST00000634712 WASHC4Q2M389 1173 aa19.85■□□□□ 0.77
LINC00339-207ENST00000634712 GPC2Q8N158 579 aa19.85■□□□□ 0.77
LINC00339-207ENST00000634712 EYA3Q99504 573 aa19.85■□□□□ 0.77
LINC00339-207ENST00000634712 IGHMBP2P38935 993 aaKnown RBP19.84■□□□□ 0.77
LINC00339-207ENST00000634712 ZNRF3Q9ULT6 936 aa19.84■□□□□ 0.77
LINC00339-207ENST00000634712 CHMP3Q9Y3E7 222 aa19.84■□□□□ 0.77
LINC00339-207ENST00000634712 MYH3P11055 1940 aa19.84■□□□□ 0.77
LINC00339-207ENST00000634712 WDR90Q96KV7 1748 aa19.83■□□□□ 0.77
LINC00339-207ENST00000634712 POTECB2RU33 542 aa19.83■□□□□ 0.77
LINC00339-207ENST00000634712 ITGA6P23229 1130 aa19.83■□□□□ 0.77
LINC00339-207ENST00000634712 L3MBTL3Q96JM7 780 aaPredicted RBP19.83■□□□□ 0.77
LINC00339-207ENST00000634712 GGA1Q9UJY5 639 aa19.83■□□□□ 0.77
LINC00339-207ENST00000634712 RTL9Q8NET4 1388 aa19.83■□□□□ 0.76
LINC00339-207ENST00000634712 G3V3G9 751 aa19.83■□□□□ 0.76
LINC00339-207ENST00000634712 RIMBP2O15034 1052 aa19.83■□□□□ 0.76
LINC00339-207ENST00000634712 CSF1RP07333 972 aa19.83■□□□□ 0.76
LINC00339-207ENST00000634712 FSTL1Q12841 308 aa19.83■□□□□ 0.76
LINC00339-207ENST00000634712 DCAF8Q5TAQ9 597 aa19.83■□□□□ 0.76
LINC00339-207ENST00000634712 SMC1BQ8NDV3 1235 aa19.83■□□□□ 0.76
LINC00339-207ENST00000634712 TBC1D16Q8TBP0 767 aa19.83■□□□□ 0.76
LINC00339-207ENST00000634712 MPHOSPH8Q99549 860 aa19.83■□□□□ 0.76
LINC00339-207ENST00000634712 ZC3H12CQ9C0D7 883 aaKnown RBP19.83■□□□□ 0.76
LINC00339-207ENST00000634712 BSDC1Q9NW68 430 aaPredicted RBP19.83■□□□□ 0.76
LINC00339-207ENST00000634712 PODXL2Q9NZ53 605 aa19.83■□□□□ 0.76
LINC00339-207ENST00000634712 POLLQ9UGP5 575 aa19.83■□□□□ 0.76
LINC00339-207ENST00000634712 ANKRD18BA2A2Z9 1011 aa19.82■□□□□ 0.76
LINC00339-207ENST00000634712 UFL1O94874 794 aa19.82■□□□□ 0.76
LINC00339-207ENST00000634712 FAM161AQ3B820 660 aa19.82■□□□□ 0.76
LINC00339-207ENST00000634712 HACL1Q9UJ83 578 aa19.82■□□□□ 0.76
LINC00339-207ENST00000634712 XDHP47989 1333 aa19.81■□□□□ 0.76
LINC00339-207ENST00000634712 LRRC37AA6NMS7 1700 aa19.81■□□□□ 0.76
LINC00339-207ENST00000634712 HSPA6P17066 643 aa19.81■□□□□ 0.76
LINC00339-207ENST00000634712 LMOD1P29536 600 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms