RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 DDX46Q7L014 1031 aaKnown RBP20.25■□□□□ 0.83
SNRNP48-203ENST00000634363 SP8Q8IXZ3 490 aa20.25■□□□□ 0.83
SNRNP48-203ENST00000634363 VPS33BQ9H267 617 aa20.25■□□□□ 0.83
SNRNP48-203ENST00000634363 BABAM1Q9NWV8 329 aa20.25■□□□□ 0.83
SNRNP48-203ENST00000634363 GPRC5DQ9NZD1 345 aa20.25■□□□□ 0.83
SNRNP48-203ENST00000634363 LAMB2P55268 1798 aa20.24■□□□□ 0.83
SNRNP48-203ENST00000634363 TCIRG1Q13488 830 aa20.24■□□□□ 0.83
SNRNP48-203ENST00000634363 KRT24Q2M2I5 525 aa20.24■□□□□ 0.83
SNRNP48-203ENST00000634363 CST9Q5W186 159 aa20.24■□□□□ 0.83
SNRNP48-203ENST00000634363 ADARB2Q9NS39 739 aaKnown RBP20.24■□□□□ 0.83
SNRNP48-203ENST00000634363 TAF1P21675 1872 aa20.24■□□□□ 0.83
SNRNP48-203ENST00000634363 TRPM7Q96QT4 1865 aa20.24■□□□□ 0.83
SNRNP48-203ENST00000634363 ANKRD36CQ5JPF3 1778 aa20.23■□□□□ 0.83
SNRNP48-203ENST00000634363 CYP4F22Q6NT55 531 aa20.23■□□□□ 0.83
SNRNP48-203ENST00000634363 CAPNS2Q96L46 248 aa20.23■□□□□ 0.83
SNRNP48-203ENST00000634363 BCL2L13Q9BXK5 485 aa20.23■□□□□ 0.83
SNRNP48-203ENST00000634363 RAD17O75943 681 aa20.22■□□□□ 0.83
SNRNP48-203ENST00000634363 ECE1P42892 770 aa20.22■□□□□ 0.83
SNRNP48-203ENST00000634363 GMPSP49915 693 aaPredicted RBP20.22■□□□□ 0.83
SNRNP48-203ENST00000634363 GPR101Q96P66 508 aaPredicted RBP20.22■□□□□ 0.83
SNRNP48-203ENST00000634363 BEGAINQ9BUH8 593 aa20.22■□□□□ 0.83
SNRNP48-203ENST00000634363 RTFDC1Q9BY42 306 aaPredicted RBP20.22■□□□□ 0.83
SNRNP48-203ENST00000634363 HSPA8P11142 646 aaKnown RBP20.21■□□□□ 0.83
SNRNP48-203ENST00000634363 CIAPIN1Q6FI81 312 aa20.21■□□□□ 0.83
SNRNP48-203ENST00000634363 SH3TC1Q8TE82 1336 aa20.21■□□□□ 0.83
SNRNP48-203ENST00000634363 GRAPQ13588 217 aa20.2■□□□□ 0.82
SNRNP48-203ENST00000634363 TNIP1Q15025 636 aa20.2■□□□□ 0.82
SNRNP48-203ENST00000634363 GRAPLQ8TC17 118 aaPredicted RBP20.2■□□□□ 0.82
SNRNP48-203ENST00000634363 CHPF2Q9P2E5 772 aa20.2■□□□□ 0.82
SNRNP48-203ENST00000634363 CHL1O00533 1208 aa20.19■□□□□ 0.82
SNRNP48-203ENST00000634363 KIAA2012Q0VF49 1180 aa20.19■□□□□ 0.82
SNRNP48-203ENST00000634363 GLIS2Q9BZE0 524 aaPredicted RBP20.19■□□□□ 0.82
SNRNP48-203ENST00000634363 ZNF408Q9H9D4 720 aa20.19■□□□□ 0.82
SNRNP48-203ENST00000634363 TLL2Q9Y6L7 1015 aa20.19■□□□□ 0.82
SNRNP48-203ENST00000634363 CELF2O95319 508 aaKnown RBP20.18■□□□□ 0.82
SNRNP48-203ENST00000634363 RTL5Q5HYW3 569 aaPredicted RBP20.18■□□□□ 0.82
SNRNP48-203ENST00000634363 DIEXFQ68CQ4 756 aaKnown RBP20.18■□□□□ 0.82
SNRNP48-203ENST00000634363 ATP5J2-PTCD1G3V325 749 aa20.17■□□□□ 0.82
SNRNP48-203ENST00000634363 AOC2O75106 756 aa20.17■□□□□ 0.82
SNRNP48-203ENST00000634363 HDGFL1Q5TGJ6 251 aa20.17■□□□□ 0.82
SNRNP48-203ENST00000634363 ANKRD13DQ6ZTN6 518 aa20.17■□□□□ 0.82
SNRNP48-203ENST00000634363 FAM89AQ96GI7 184 aa20.17■□□□□ 0.82
SNRNP48-203ENST00000634363 CNOT7Q9UIV1 285 aaKnown RBP20.17■□□□□ 0.82
SNRNP48-203ENST00000634363 PLBD2Q8NHP8 589 aa20.16■□□□□ 0.82
SNRNP48-203ENST00000634363 NSFL1CQ9UNZ2 370 aaKnown RBP20.16■□□□□ 0.82
SNRNP48-203ENST00000634363 TRIM35Q9UPQ4 493 aa20.16■□□□□ 0.82
SNRNP48-203ENST00000634363 SHTN1A0MZ66 631 aa20.15■□□□□ 0.82
SNRNP48-203ENST00000634363 YDJCA8MPS7 323 aa20.15■□□□□ 0.82
SNRNP48-203ENST00000634363 H7C1D1 291 aa20.15■□□□□ 0.82
SNRNP48-203ENST00000634363 RIMBP2O15034 1052 aa20.15■□□□□ 0.82
SNRNP48-203ENST00000634363 HIRAP54198 1017 aaPredicted RBP20.15■□□□□ 0.82
SNRNP48-203ENST00000634363 TSKSQ9UJT2 592 aa20.15■□□□□ 0.82
SNRNP48-203ENST00000634363 C6orf229H3BNL8 230 aa20.14■□□□□ 0.81
SNRNP48-203ENST00000634363 APAF1O14727 1248 aa20.14■□□□□ 0.81
SNRNP48-203ENST00000634363 WASHC4Q2M389 1173 aa20.14■□□□□ 0.81
SNRNP48-203ENST00000634363 TMC4Q7Z404 712 aa20.14■□□□□ 0.81
SNRNP48-203ENST00000634363 SAPCD2Q86UD0 394 aa20.14■□□□□ 0.81
SNRNP48-203ENST00000634363 TRPM4Q8TD43 1214 aa20.14■□□□□ 0.81
SNRNP48-203ENST00000634363 ABHD8Q96I13 439 aa20.14■□□□□ 0.81
SNRNP48-203ENST00000634363 DBF4Q9UBU7 674 aaPredicted RBP20.14■□□□□ 0.81
SNRNP48-203ENST00000634363 ZBTB12Q9Y330 459 aaPredicted RBP20.14■□□□□ 0.81
SNRNP48-203ENST00000634363 MAP2K2P36507 400 aa20.13■□□□□ 0.81
SNRNP48-203ENST00000634363 CDC37L1Q7L3B6 337 aa20.13■□□□□ 0.81
SNRNP48-203ENST00000634363 FAM9BQ8IZU0 186 aa20.13■□□□□ 0.81
SNRNP48-203ENST00000634363 CELF1Q92879 486 aaKnown RBP20.13■□□□□ 0.81
SNRNP48-203ENST00000634363 DBNDD1Q9H9R9 158 aa20.13■□□□□ 0.81
SNRNP48-203ENST00000634363 PGAP2Q9UHJ9 254 aa20.13■□□□□ 0.81
SNRNP48-203ENST00000634363 DDX60Q8IY21 1712 aaKnown RBP20.13■□□□□ 0.81
SNRNP48-203ENST00000634363 CDHR2Q9BYE9 1310 aa20.12■□□□□ 0.81
SNRNP48-203ENST00000634363 USP48Q86UV5 1035 aa20.12■□□□□ 0.81
SNRNP48-203ENST00000634363 MICALL2Q8IY33 904 aa20.12■□□□□ 0.81
SNRNP48-203ENST00000634363 ZC3H15Q8WU90 426 aaKnown RBP20.12■□□□□ 0.81
SNRNP48-203ENST00000634363 ISCA1Q9BUE6 129 aa20.12■□□□□ 0.81
SNRNP48-203ENST00000634363 DOK7Q18PE1 504 aa20.11■□□□□ 0.81
SNRNP48-203ENST00000634363 DUSP27Q5VZP5 1158 aa20.11■□□□□ 0.81
SNRNP48-203ENST00000634363 SAMD7Q7Z3H4 446 aa20.11■□□□□ 0.81
SNRNP48-203ENST00000634363 HYPKQ9NX55 129 aa20.11■□□□□ 0.81
SNRNP48-203ENST00000634363 CCER2I3L3R5 266 aa20.1■□□□□ 0.81
SNRNP48-203ENST00000634363 PSMD14O00487 310 aa20.1■□□□□ 0.81
SNRNP48-203ENST00000634363 GPSM2P81274 684 aa20.1■□□□□ 0.81
SNRNP48-203ENST00000634363 SF3B3Q15393 1217 aaKnown RBP20.1■□□□□ 0.81
SNRNP48-203ENST00000634363 RBM26Q5T8P6 1007 aaKnown RBP20.1■□□□□ 0.81
SNRNP48-203ENST00000634363 DLK2Q6UY11 383 aa20.1■□□□□ 0.81
SNRNP48-203ENST00000634363 POLR2AP24928 1970 aaKnown RBP20.09■□□□□ 0.81
SNRNP48-203ENST00000634363 CCDC85CA6NKD9 419 aa20.09■□□□□ 0.81
SNRNP48-203ENST00000634363 IRS4O14654 1257 aaPredicted RBP20.09■□□□□ 0.81
SNRNP48-203ENST00000634363 HOXB7P09629 217 aa20.09■□□□□ 0.81
SNRNP48-203ENST00000634363 TBC1D10BQ4KMP7 808 aaPredicted RBP20.09■□□□□ 0.81
SNRNP48-203ENST00000634363 RIC3Q7Z5B4 369 aa20.09■□□□□ 0.81
SNRNP48-203ENST00000634363 CFAP44Q96MT7 982 aa20.09■□□□□ 0.81
SNRNP48-203ENST00000634363 KCNQ5Q9NR82 932 aa20.09■□□□□ 0.81
SNRNP48-203ENST00000634363 POLLQ9UGP5 575 aa20.09■□□□□ 0.81
SNRNP48-203ENST00000634363 THSD7BQ9C0I4 1608 aa20.09■□□□□ 0.81
SNRNP48-203ENST00000634363 DUOX1Q9NRD9 1551 aa20.08■□□□□ 0.81
SNRNP48-203ENST00000634363 G3V3G9 751 aa20.08■□□□□ 0.81
SNRNP48-203ENST00000634363 ELL2O00472 640 aaPredicted RBP20.08■□□□□ 0.81
SNRNP48-203ENST00000634363 RPS8P62241 208 aaKnown RBP20.08■□□□□ 0.81
SNRNP48-203ENST00000634363 DCAF8Q5TAQ9 597 aa20.08■□□□□ 0.81
SNRNP48-203ENST00000634363 DPF2Q92785 391 aa20.08■□□□□ 0.81
SNRNP48-203ENST00000634363 ECE2O60344 883 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms