RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	ALDH1B1	P30837	517 aa		32.71	■■■□□ 2.83
UBE3A-222	ENST00000630907	C20orf194	Q5TEA3	1177 aa		32.71	■■■□□ 2.83
UBE3A-222	ENST00000630907	DDX46	Q7L014	1031 aa	Known RBP	32.71	■■■□□ 2.83
UBE3A-222	ENST00000630907	TTLL6	Q8N841	843 aa		32.71	■■■□□ 2.83
UBE3A-222	ENST00000630907	TTLL11	Q8NHH1	800 aa		32.71	■■■□□ 2.83
UBE3A-222	ENST00000630907	GNAI3	P08754	354 aa		32.7	■■■□□ 2.83
UBE3A-222	ENST00000630907	FOXO4	P98177	505 aa		32.7	■■■□□ 2.83
UBE3A-222	ENST00000630907	DALRD3	Q5D0E6	543 aa	Known RBP	32.7	■■■□□ 2.83
UBE3A-222	ENST00000630907	CRAMP1	Q96RY5	1269 aa		32.7	■■■□□ 2.83
UBE3A-222	ENST00000630907	HDAC5	Q9UQL6	1122 aa		32.7	■■■□□ 2.83
UBE3A-222	ENST00000630907	DLEC1	Q9Y238	1755 aa		32.69	■■■□□ 2.82
UBE3A-222	ENST00000630907	EPHA10	Q5JZY3	1008 aa		32.69	■■■□□ 2.82
UBE3A-222	ENST00000630907	KAZALD1	Q96I82	304 aa		32.69	■■■□□ 2.82
UBE3A-222	ENST00000630907	CCDC85A	Q96PX6	553 aa	Predicted RBP	32.69	■■■□□ 2.82
UBE3A-222	ENST00000630907	COG6	Q9Y2V7	657 aa		32.69	■■■□□ 2.82
UBE3A-222	ENST00000630907	CSF1R	P07333	972 aa		32.68	■■■□□ 2.82
UBE3A-222	ENST00000630907	MVP	Q14764	893 aa	Known RBP	32.68	■■■□□ 2.82
UBE3A-222	ENST00000630907	PELP1	Q8IZL8	1130 aa	Known RBP	32.67	■■■□□ 2.82
UBE3A-222	ENST00000630907	BCS1L	Q9Y276	419 aa		32.67	■■■□□ 2.82
UBE3A-222	ENST00000630907	SUPT16H	Q9Y5B9	1047 aa	Known RBP	32.67	■■■□□ 2.82
UBE3A-222	ENST00000630907	LMBR1L	Q6UX01	489 aa		32.66	■■■□□ 2.82
UBE3A-222	ENST00000630907	ZBTB7B	O15156	539 aa	Predicted RBP	32.65	■■■□□ 2.82
UBE3A-222	ENST00000630907	BICC1	Q9H694	974 aa	Known RBP	32.65	■■■□□ 2.82
UBE3A-222	ENST00000630907	GREM2	Q9H772	168 aa		32.65	■■■□□ 2.82
UBE3A-222	ENST00000630907	GRAP	Q13588	217 aa		32.64	■■■□□ 2.82
UBE3A-222	ENST00000630907	PRPF40B	Q6NWY9	871 aa	Known RBP	32.64	■■■□□ 2.82
UBE3A-222	ENST00000630907	GRAPL	Q8TC17	118 aa	Predicted RBP	32.64	■■■□□ 2.82
UBE3A-222	ENST00000630907	SEC31B	Q9NQW1	1179 aa		32.64	■■■□□ 2.82
UBE3A-222	ENST00000630907	DDX19B	Q9UMR2	479 aa		32.64	■■■□□ 2.82
UBE3A-222	ENST00000630907	CHMP3	Q9Y3E7	222 aa		32.64	■■■□□ 2.82
UBE3A-222	ENST00000630907	LRRFIP2	Q9Y608	721 aa	Known RBP	32.64	■■■□□ 2.82
UBE3A-222	ENST00000630907	RTL9	Q8NET4	1388 aa		32.63	■■■□□ 2.81
UBE3A-222	ENST00000630907	BRCA1	P38398	1863 aa	Known RBP	32.63	■■■□□ 2.81
UBE3A-222	ENST00000630907	MYH3	P11055	1940 aa		32.62	■■■□□ 2.81
UBE3A-222	ENST00000630907	GNAI2	P04899	355 aa		32.62	■■■□□ 2.81
UBE3A-222	ENST00000630907	GPR162	Q16538	588 aa		32.62	■■■□□ 2.81
UBE3A-222	ENST00000630907	FAM161A	Q3B820	660 aa		32.62	■■■□□ 2.81
UBE3A-222	ENST00000630907	RABL6	Q3YEC7	729 aa	Predicted RBP	32.62	■■■□□ 2.81
UBE3A-222	ENST00000630907	ANKRD44	Q8N8A2	993 aa		32.62	■■■□□ 2.81
UBE3A-222	ENST00000630907	BBOX1	O75936	387 aa		32.61	■■■□□ 2.81
UBE3A-222	ENST00000630907	CELF1	Q92879	486 aa	Known RBP	32.61	■■■□□ 2.81
UBE3A-222	ENST00000630907	ITGA6	P23229	1130 aa		32.6	■■■□□ 2.81
UBE3A-222	ENST00000630907	CHMP4B	Q9H444	224 aa	Known RBP	32.6	■■■□□ 2.81
UBE3A-222	ENST00000630907	YBX3	P16989	372 aa	Known RBP eCLIP	32.59	■■■□□ 2.81	2e-8	■■■□□ 17.3
UBE3A-222	ENST00000630907	RPS8	P62241	208 aa	Known RBP	32.59	■■■□□ 2.81
UBE3A-222	ENST00000630907	CDC5L	Q99459	802 aa	Known RBP	32.59	■■■□□ 2.81
UBE3A-222	ENST00000630907	ZNF219	Q9P2Y4	722 aa	Predicted RBP	32.59	■■■□□ 2.81
UBE3A-222	ENST00000630907	ANKRD18B	A2A2Z9	1011 aa		32.58	■■■□□ 2.81
UBE3A-222	ENST00000630907	DCAF8L1	A6NGE4	600 aa		32.58	■■■□□ 2.81
UBE3A-222	ENST00000630907	PPEF1	O14829	653 aa	Predicted RBP	32.58	■■■□□ 2.81
UBE3A-222	ENST00000630907	IFIT5	Q13325	482 aa	Known RBP	32.58	■■■□□ 2.81
UBE3A-222	ENST00000630907	SLX4	Q8IY92	1834 aa		32.57	■■■□□ 2.8
UBE3A-222	ENST00000630907	C21orf2	O43822	256 aa		32.57	■■■□□ 2.8
UBE3A-222	ENST00000630907	CCDC57	Q2TAC2	916 aa		32.57	■■■□□ 2.8
UBE3A-222	ENST00000630907	CENPB	P07199	599 aa	Predicted RBP	32.56	■■■□□ 2.8
UBE3A-222	ENST00000630907	ANKRD18A	Q8IVF6	992 aa		32.56	■■■□□ 2.8
UBE3A-222	ENST00000630907	C7orf43	Q8WVR3	580 aa		32.56	■■■□□ 2.8
UBE3A-222	ENST00000630907	TMC4	Q7Z404	712 aa		32.55	■■■□□ 2.8
UBE3A-222	ENST00000630907	CACNA1S	Q13698	1873 aa		32.53	■■■□□ 2.8
UBE3A-222	ENST00000630907	GRIN3B	O60391	1043 aa		32.53	■■■□□ 2.8
UBE3A-222	ENST00000630907	IGHMBP2	P38935	993 aa	Known RBP	32.53	■■■□□ 2.8
UBE3A-222	ENST00000630907	SOGA3	Q5TF21	947 aa		32.53	■■■□□ 2.8
UBE3A-222	ENST00000630907	TMX4	Q9H1E5	349 aa	Predicted RBP	32.53	■■■□□ 2.8
UBE3A-222	ENST00000630907	C1orf115	Q9H7X2	142 aa		32.53	■■■□□ 2.8
UBE3A-222	ENST00000630907	ATP6V0A2	Q9Y487	856 aa		32.53	■■■□□ 2.8
UBE3A-222	ENST00000630907	TAF7L	Q5H9L4	462 aa		32.52	■■■□□ 2.8
UBE3A-222	ENST00000630907	SP8	Q8IXZ3	490 aa		32.52	■■■□□ 2.8
UBE3A-222	ENST00000630907	ZBTB40	Q9NUA8	1239 aa		32.52	■■■□□ 2.8
UBE3A-222	ENST00000630907	TAF1	P21675	1872 aa		32.52	■■■□□ 2.8
UBE3A-222	ENST00000630907	COL4A1	P02462	1669 aa		32.51	■■■□□ 2.79
UBE3A-222	ENST00000630907	CC2D2B	Q6DHV5	1058 aa		32.51	■■■□□ 2.79
UBE3A-222	ENST00000630907	CRBN	Q96SW2	442 aa		32.51	■■■□□ 2.79
UBE3A-222	ENST00000630907	ARFGEF1	Q9Y6D6	1849 aa		32.51	■■■□□ 2.79
UBE3A-222	ENST00000630907	CCDC93	Q567U6	631 aa		32.5	■■■□□ 2.79
UBE3A-222	ENST00000630907	OLFM4	Q6UX06	510 aa		32.5	■■■□□ 2.79
UBE3A-222	ENST00000630907	MTX1	Q13505	466 aa		32.49	■■■□□ 2.79
UBE3A-222	ENST00000630907	ZNF594	Q96JF6	807 aa	Predicted RBP	32.49	■■■□□ 2.79
UBE3A-222	ENST00000630907	MPHOSPH8	Q99549	860 aa		32.49	■■■□□ 2.79
UBE3A-222	ENST00000630907	BSDC1	Q9NW68	430 aa	Predicted RBP	32.49	■■■□□ 2.79
UBE3A-222	ENST00000630907	ARHGAP27	Q6ZUM4	889 aa		32.48	■■■□□ 2.79
UBE3A-222	ENST00000630907	SRGAP3	O43295	1099 aa		32.47	■■■□□ 2.79
UBE3A-222	ENST00000630907	SLC51A	Q86UW1	340 aa		32.47	■■■□□ 2.79
UBE3A-222	ENST00000630907	RFX5	P48382	616 aa	Predicted RBP	32.46	■■■□□ 2.79
UBE3A-222	ENST00000630907	GRIPAP1	Q4V328	841 aa		32.46	■■■□□ 2.79
UBE3A-222	ENST00000630907	RTKN2	Q8IZC4	609 aa		32.46	■■■□□ 2.79
UBE3A-222	ENST00000630907	ATP8B2	P98198	1209 aa		32.45	■■■□□ 2.79
UBE3A-222	ENST00000630907	LDHAL6A	Q6ZMR3	332 aa		32.44	■■■□□ 2.78
UBE3A-222	ENST00000630907	KLHDC4	Q8TBB5	520 aa		32.43	■■■□□ 2.78
UBE3A-222	ENST00000630907	CNNM1	Q9NRU3	951 aa		32.43	■■■□□ 2.78
UBE3A-222	ENST00000630907	PNMA6E	A0A0J9YXQ4	647 aa		32.42	■■■□□ 2.78
UBE3A-222	ENST00000630907	PTPN12	Q05209	780 aa	Known RBP	32.42	■■■□□ 2.78
UBE3A-222	ENST00000630907	CEP85	Q6P2H3	762 aa		32.42	■■■□□ 2.78
UBE3A-222	ENST00000630907	MPND	Q8N594	471 aa		32.42	■■■□□ 2.78
UBE3A-222	ENST00000630907	MINPP1	Q9UNW1	487 aa		32.42	■■■□□ 2.78
UBE3A-222	ENST00000630907	NFKBIE	O00221	500 aa		32.4	■■■□□ 2.78
UBE3A-222	ENST00000630907	GPSM2	P81274	684 aa		32.4	■■■□□ 2.78
UBE3A-222	ENST00000630907	DPP8	Q6V1X1	898 aa	Predicted RBP	32.4	■■■□□ 2.78
UBE3A-222	ENST00000630907	RPAP2	Q8IXW5	612 aa	Predicted RBP	32.4	■■■□□ 2.78
UBE3A-222	ENST00000630907	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.4	■■■□□ 2.78
UBE3A-222	ENST00000630907	SNED1	Q8TER0	1413 aa		32.4	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms