RNA–Protein interactions for RNA: ENST00000630659.2

BBS1-225, Transcript of Bardet-Biedl syndrome 1, human

TSL 5 BASIC

Gene BBS1, Length 1,934 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-225	ENST00000630659	JARID2	Q92833	1246 aa	Predicted RBP	18.34	■□□□□ 0.53
BBS1-225	ENST00000630659		H7C1W4	665 aa		18.33	■□□□□ 0.53
BBS1-225	ENST00000630659	TSHZ3	Q63HK5	1081 aa		18.33	■□□□□ 0.53
BBS1-225	ENST00000630659	FNBP4	Q8N3X1	1017 aa	Predicted RBP	18.33	■□□□□ 0.53
BBS1-225	ENST00000630659	CCDC191	Q8NCU4	936 aa		18.33	■□□□□ 0.53
BBS1-225	ENST00000630659	FEZ1	Q99689	392 aa		18.33	■□□□□ 0.53
BBS1-225	ENST00000630659	G3BP1	Q13283	466 aa	Known RBP eCLIP	18.33	■□□□□ 0.52
BBS1-225	ENST00000630659	RABL6	Q3YEC7	729 aa	Predicted RBP	18.33	■□□□□ 0.52
BBS1-225	ENST00000630659	ACSBG1	Q96GR2	724 aa		18.33	■□□□□ 0.52
BBS1-225	ENST00000630659	FOXD4L1	Q9NU39	408 aa		18.33	■□□□□ 0.52
BBS1-225	ENST00000630659	KIF6	Q6ZMV9	814 aa		18.32	■□□□□ 0.52
BBS1-225	ENST00000630659	DIAPH3	Q9NSV4	1193 aa		18.32	■□□□□ 0.52
BBS1-225	ENST00000630659	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.32	■□□□□ 0.52
BBS1-225	ENST00000630659	TCIRG1	Q13488	830 aa		18.31	■□□□□ 0.52
BBS1-225	ENST00000630659	FAM98C	Q17RN3	349 aa	Known RBP	18.31	■□□□□ 0.52
BBS1-225	ENST00000630659	CLASRP	Q8N2M8	674 aa	Known RBP	18.31	■□□□□ 0.52
BBS1-225	ENST00000630659	ISCA1	Q9BUE6	129 aa		18.31	■□□□□ 0.52
BBS1-225	ENST00000630659	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	18.31	■□□□□ 0.52
BBS1-225	ENST00000630659		A0A0G2JS52	829 aa		18.31	■□□□□ 0.52
BBS1-225	ENST00000630659	ZNF710	Q8N1W2	664 aa		18.31	■□□□□ 0.52
BBS1-225	ENST00000630659	TSPY26P	Q9H489	355 aa		18.31	■□□□□ 0.52
BBS1-225	ENST00000630659	SPTLC3	Q9NUV7	552 aa		18.31	■□□□□ 0.52
BBS1-225	ENST00000630659	TUBGCP6	Q96RT7	1819 aa		18.31	■□□□□ 0.52
BBS1-225	ENST00000630659	ST18	O60284	1047 aa		18.3	■□□□□ 0.52
BBS1-225	ENST00000630659	GPT2	Q8TD30	523 aa		18.3	■□□□□ 0.52
BBS1-225	ENST00000630659	TJP1	Q07157	1748 aa		18.3	■□□□□ 0.52
BBS1-225	ENST00000630659	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	18.29	■□□□□ 0.52
BBS1-225	ENST00000630659	GTF2E1	P29083	439 aa	Predicted RBP	18.29	■□□□□ 0.52
BBS1-225	ENST00000630659	CHAF1A	Q13111	956 aa	Predicted RBP	18.29	■□□□□ 0.52
BBS1-225	ENST00000630659	TRIM28	Q13263	835 aa	Known RBP	18.29	■□□□□ 0.52
BBS1-225	ENST00000630659	COPRS	Q9NQ92	184 aa		18.29	■□□□□ 0.52
BBS1-225	ENST00000630659	MAP3K15	Q6ZN16	1313 aa		18.29	■□□□□ 0.52
BBS1-225	ENST00000630659	USP42	Q9H9J4	1324 aa	Known RBP	18.29	■□□□□ 0.52
BBS1-225	ENST00000630659	PRPF40A	O75400	957 aa	Known RBP	18.29	■□□□□ 0.52
BBS1-225	ENST00000630659	SASH1	O94885	1247 aa		18.29	■□□□□ 0.52
BBS1-225	ENST00000630659	TPM3	P06753	285 aa		18.29	■□□□□ 0.52
BBS1-225	ENST00000630659	RFX5	P48382	616 aa	Predicted RBP	18.29	■□□□□ 0.52
BBS1-225	ENST00000630659	ARID3A	Q99856	593 aa		18.29	■□□□□ 0.52
BBS1-225	ENST00000630659	USP21	Q9UK80	565 aa		18.29	■□□□□ 0.52
BBS1-225	ENST00000630659	AK9	Q5TCS8	1911 aa		18.28	■□□□□ 0.52
BBS1-225	ENST00000630659	TRIM6-TRIM34	B2RNG4	842 aa		18.28	■□□□□ 0.52
BBS1-225	ENST00000630659	CBX1	P83916	185 aa		18.28	■□□□□ 0.52
BBS1-225	ENST00000630659	NOLC1	Q14978	699 aa	Known RBP eCLIP	18.28	■□□□□ 0.52
BBS1-225	ENST00000630659	PDCL2	Q8N4E4	241 aa		18.28	■□□□□ 0.52
BBS1-225	ENST00000630659	PI4K2B	Q8TCG2	481 aa		18.28	■□□□□ 0.52
BBS1-225	ENST00000630659	ZBTB1	Q9Y2K1	713 aa		18.28	■□□□□ 0.52
BBS1-225	ENST00000630659	TTC41P	Q6P2S7	1318 aa		18.28	■□□□□ 0.52
BBS1-225	ENST00000630659	SYCE3	A1L190	88 aa		18.27	■□□□□ 0.52
BBS1-225	ENST00000630659	FOXO4	P98177	505 aa		18.27	■□□□□ 0.52
BBS1-225	ENST00000630659	RILPL2	Q969X0	211 aa		18.27	■□□□□ 0.52
BBS1-225	ENST00000630659	SIL1	Q9H173	461 aa		18.27	■□□□□ 0.52
BBS1-225	ENST00000630659	TMEM63C	Q9P1W3	806 aa		18.27	■□□□□ 0.52
BBS1-225	ENST00000630659	IFIT2	P09913	472 aa	Known RBP	18.27	■□□□□ 0.51
BBS1-225	ENST00000630659	IL6ST	P40189	918 aa	Predicted RBP	18.27	■□□□□ 0.51
BBS1-225	ENST00000630659	GABPB1	Q06547	395 aa	Predicted RBP	18.27	■□□□□ 0.51
BBS1-225	ENST00000630659	LMBR1L	Q6UX01	489 aa		18.27	■□□□□ 0.51
BBS1-225	ENST00000630659	GIGYF2	Q6Y7W6	1299 aa	Known RBP	18.27	■□□□□ 0.51
BBS1-225	ENST00000630659	KLHDC4	Q8TBB5	520 aa		18.27	■□□□□ 0.51
BBS1-225	ENST00000630659	PTPN12	Q05209	780 aa	Known RBP	18.26	■□□□□ 0.51
BBS1-225	ENST00000630659	SYCP1	Q15431	976 aa		18.26	■□□□□ 0.51
BBS1-225	ENST00000630659	SMARCC1	Q92922	1105 aa	Predicted RBP	18.26	■□□□□ 0.51
BBS1-225	ENST00000630659	ERC2	O15083	957 aa		18.25	■□□□□ 0.51
BBS1-225	ENST00000630659	HSP90AB3P	Q58FF7	597 aa		18.25	■□□□□ 0.51
BBS1-225	ENST00000630659	AACS	Q86V21	672 aa		18.25	■□□□□ 0.51
BBS1-225	ENST00000630659	GPATCH3	Q96I76	525 aa		18.25	■□□□□ 0.51
BBS1-225	ENST00000630659	LOC102724428	A0A0B4J2F2	783 aa		18.25	■□□□□ 0.51
BBS1-225	ENST00000630659	GLRX3	O76003	335 aa	Known RBP	18.25	■□□□□ 0.51
BBS1-225	ENST00000630659	HSPA1L	P34931	641 aa		18.25	■□□□□ 0.51
BBS1-225	ENST00000630659	ATP6V1A	P38606	617 aa		18.25	■□□□□ 0.51
BBS1-225	ENST00000630659	SIK1	P57059	783 aa		18.25	■□□□□ 0.51
BBS1-225	ENST00000630659	ANKRD7	Q92527	254 aa		18.25	■□□□□ 0.51
BBS1-225	ENST00000630659	USP26	Q9BXU7	913 aa		18.25	■□□□□ 0.51
BBS1-225	ENST00000630659	ECHDC1	Q9NTX5	307 aa		18.25	■□□□□ 0.51
BBS1-225	ENST00000630659	REC8	O95072	547 aa		18.24	■□□□□ 0.51
BBS1-225	ENST00000630659	IPO4	Q8TEX9	1081 aa	Known RBP	18.24	■□□□□ 0.51
BBS1-225	ENST00000630659	PALLD	Q8WX93	1383 aa		18.24	■□□□□ 0.51
BBS1-225	ENST00000630659	KCNQ2	O43526	872 aa		18.23	■□□□□ 0.51
BBS1-225	ENST00000630659	PCCA	P05165	728 aa	Predicted RBP	18.23	■□□□□ 0.51
BBS1-225	ENST00000630659	CHML	P26374	656 aa		18.23	■□□□□ 0.51
BBS1-225	ENST00000630659	HLF	Q16534	295 aa		18.23	■□□□□ 0.51
BBS1-225	ENST00000630659	MEX3C	Q5U5Q3	659 aa	Known RBP	18.23	■□□□□ 0.51
BBS1-225	ENST00000630659	EAF2	Q96CJ1	260 aa	Predicted RBP	18.23	■□□□□ 0.51
BBS1-225	ENST00000630659	CCDC87	Q9NVE4	849 aa		18.23	■□□□□ 0.51
BBS1-225	ENST00000630659	CHMP3	Q9Y3E7	222 aa		18.23	■□□□□ 0.51
BBS1-225	ENST00000630659	ERVV-1	B6SEH8	477 aa		18.23	■□□□□ 0.51
BBS1-225	ENST00000630659	ATP2B3	Q16720	1220 aa		18.23	■□□□□ 0.51
BBS1-225	ENST00000630659	INTS5	Q6P9B9	1019 aa	Known RBP	18.23	■□□□□ 0.51
BBS1-225	ENST00000630659	BCL2L12	Q9HB09	334 aa		18.23	■□□□□ 0.51
BBS1-225	ENST00000630659	OGFR	Q9NZT2	677 aa		18.23	■□□□□ 0.51
BBS1-225	ENST00000630659	RBM27	Q9P2N5	1060 aa	Known RBP	18.23	■□□□□ 0.51
BBS1-225	ENST00000630659	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	18.23	■□□□□ 0.51
BBS1-225	ENST00000630659	CIC	Q96RK0	1608 aa	Predicted RBP	18.23	■□□□□ 0.51
BBS1-225	ENST00000630659	MCM2	P49736	904 aa		18.22	■□□□□ 0.51
BBS1-225	ENST00000630659	FAM193A	P78312	1265 aa		18.22	■□□□□ 0.51
BBS1-225	ENST00000630659	DZIP3	Q86Y13	1208 aa	Known RBP	18.22	■□□□□ 0.51
BBS1-225	ENST00000630659	CNTROB	Q8N137	903 aa		18.22	■□□□□ 0.51
BBS1-225	ENST00000630659	ESYT1	Q9BSJ8	1104 aa		18.22	■□□□□ 0.51
BBS1-225	ENST00000630659	CRKL	P46109	303 aa	Known RBP	18.21	■□□□□ 0.51
BBS1-225	ENST00000630659	EIF5	P55010	431 aa	Known RBP	18.21	■□□□□ 0.51
BBS1-225	ENST00000630659	CCDC66	A2RUB6	948 aa		18.21	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms