RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 PANK1Q8TE04 598 aa12.44□□□□□ -0.42
SOX2-OT-249ENST00000628810 BMP2KQ9NSY1 1161 aaPredicted RBP12.44□□□□□ -0.42
SOX2-OT-249ENST00000628810 METRNQ9UJH8 293 aa12.44□□□□□ -0.42
SOX2-OT-249ENST00000628810 TNRC6CQ9HCJ0 1690 aaKnown RBP12.44□□□□□ -0.42
SOX2-OT-249ENST00000628810 ANKRD31Q8N7Z5 1873 aa12.43□□□□□ -0.42
SOX2-OT-249ENST00000628810 H7C1W4 665 aa12.43□□□□□ -0.42
SOX2-OT-249ENST00000628810 GRM8O00222 908 aa12.43□□□□□ -0.42
SOX2-OT-249ENST00000628810 SERPINB2P05120 415 aa12.43□□□□□ -0.42
SOX2-OT-249ENST00000628810 PCCAP05165 728 aaPredicted RBP12.43□□□□□ -0.42
SOX2-OT-249ENST00000628810 ATN1P54259 1190 aaPredicted RBP12.43□□□□□ -0.42
SOX2-OT-249ENST00000628810 CASP7P55210 303 aa12.43□□□□□ -0.42
SOX2-OT-249ENST00000628810 BICDL1Q6ZP65 573 aa12.43□□□□□ -0.42
SOX2-OT-249ENST00000628810 ZBTB38Q8NAP3 1195 aaPredicted RBP12.43□□□□□ -0.42
SOX2-OT-249ENST00000628810 UTP14AQ9BVJ6 771 aaKnown RBP12.43□□□□□ -0.42
SOX2-OT-249ENST00000628810 ABCC12Q96J65 1359 aa12.43□□□□□ -0.42
SOX2-OT-249ENST00000628810 SH3TC1Q8TE82 1336 aa12.42□□□□□ -0.42
SOX2-OT-249ENST00000628810 PRR5LQ6MZQ0 368 aa12.42□□□□□ -0.42
SOX2-OT-249ENST00000628810 TPTE2Q6XPS3 522 aa12.42□□□□□ -0.42
SOX2-OT-249ENST00000628810 NBPF5PQ86XG9 351 aaPredicted RBP12.42□□□□□ -0.42
SOX2-OT-249ENST00000628810 CNBD1Q8NA66 436 aa12.42□□□□□ -0.42
SOX2-OT-249ENST00000628810 USP44Q9H0E7 712 aa12.42□□□□□ -0.42
SOX2-OT-249ENST00000628810 PARP3Q9Y6F1 533 aa12.42□□□□□ -0.42
SOX2-OT-249ENST00000628810 KIAA1551Q9HCM1 1747 aa12.42□□□□□ -0.42
SOX2-OT-249ENST00000628810 POLD1P28340 1107 aa12.41□□□□□ -0.42
SOX2-OT-249ENST00000628810 SLC10A5Q5PT55 438 aa12.41□□□□□ -0.42
SOX2-OT-249ENST00000628810 ITPRIPQ8IWB1 547 aa12.41□□□□□ -0.42
SOX2-OT-249ENST00000628810 PLA2G12BQ9BX93 195 aa12.41□□□□□ -0.42
SOX2-OT-249ENST00000628810 SPON1Q9HCB6 807 aa12.41□□□□□ -0.42
SOX2-OT-249ENST00000628810 TRMT112Q9UI30 125 aaKnown RBP12.41□□□□□ -0.42
SOX2-OT-249ENST00000628810 DDX19BQ9UMR2 479 aa12.41□□□□□ -0.42
SOX2-OT-249ENST00000628810 COL11A2P13942 1736 aaPredicted RBP12.4□□□□□ -0.42
SOX2-OT-249ENST00000628810 ZBTB7BO15156 539 aaPredicted RBP12.4□□□□□ -0.42
SOX2-OT-249ENST00000628810 NBPF7P0C2Y1 421 aaPredicted RBP12.4□□□□□ -0.42
SOX2-OT-249ENST00000628810 ERFEQ4G0M1 354 aa12.4□□□□□ -0.42
SOX2-OT-249ENST00000628810 UBE3BQ7Z3V4 1068 aa12.4□□□□□ -0.42
SOX2-OT-249ENST00000628810 MEIS3Q99687 375 aa12.4□□□□□ -0.42
SOX2-OT-249ENST00000628810 TRPC6Q9Y210 931 aa12.4□□□□□ -0.42
SOX2-OT-249ENST00000628810 COG6Q9Y2V7 657 aa12.4□□□□□ -0.42
SOX2-OT-249ENST00000628810 DLEC1Q9Y238 1755 aa12.4□□□□□ -0.42
SOX2-OT-249ENST00000628810 MYH3P11055 1940 aa12.39□□□□□ -0.43
SOX2-OT-249ENST00000628810 GNAI3P08754 354 aa12.39□□□□□ -0.43
SOX2-OT-249ENST00000628810 HSP90B1P14625 803 aaKnown RBP12.39□□□□□ -0.43
SOX2-OT-249ENST00000628810 ST5P78524 1137 aa12.39□□□□□ -0.43
SOX2-OT-249ENST00000628810 NUTM1Q86Y26 1132 aa12.39□□□□□ -0.43
SOX2-OT-249ENST00000628810 FAM89AQ96GI7 184 aa12.39□□□□□ -0.43
SOX2-OT-249ENST00000628810 CHMP4BQ9H444 224 aaKnown RBP12.39□□□□□ -0.43
SOX2-OT-249ENST00000628810 C9orf78Q9NZ63 289 aaPredicted RBP12.39□□□□□ -0.43
SOX2-OT-249ENST00000628810 KLRG2A4D1S0 409 aaPredicted RBP12.38□□□□□ -0.43
SOX2-OT-249ENST00000628810 TTLL13PA6NNM8 815 aa12.38□□□□□ -0.43
SOX2-OT-249ENST00000628810 IRS4O14654 1257 aaPredicted RBP12.38□□□□□ -0.43
SOX2-OT-249ENST00000628810 UBTFL1P0CB47 393 aaPredicted RBP12.38□□□□□ -0.43
SOX2-OT-249ENST00000628810 IFNL1Q8IU54 200 aa12.38□□□□□ -0.43
SOX2-OT-249ENST00000628810 SYNE4Q8N205 404 aa12.38□□□□□ -0.43
SOX2-OT-249ENST00000628810 KAZALD1Q96I82 304 aa12.38□□□□□ -0.43
SOX2-OT-249ENST00000628810 BRIP1Q9BX63 1249 aa12.38□□□□□ -0.43
SOX2-OT-249ENST00000628810 ZBTB40Q9NUA8 1239 aa12.38□□□□□ -0.43
SOX2-OT-249ENST00000628810 RTL9Q8NET4 1388 aa12.38□□□□□ -0.43
SOX2-OT-249ENST00000628810 FAM177BA6PVY3 158 aa12.37□□□□□ -0.43
SOX2-OT-249ENST00000628810 PDE8AO60658 829 aa12.37□□□□□ -0.43
SOX2-OT-249ENST00000628810 AAMPQ13685 434 aa12.37□□□□□ -0.43
SOX2-OT-249ENST00000628810 RABL6Q3YEC7 729 aaPredicted RBP12.37□□□□□ -0.43
SOX2-OT-249ENST00000628810 CRY2Q49AN0 593 aa12.37□□□□□ -0.43
SOX2-OT-249ENST00000628810 CRBNQ96SW2 442 aa12.37□□□□□ -0.43
SOX2-OT-249ENST00000628810 HDAC5Q9UQL6 1122 aa12.37□□□□□ -0.43
SOX2-OT-249ENST00000628810 PYGBP11216 843 aa12.36□□□□□ -0.43
SOX2-OT-249ENST00000628810 GTF2E1P29083 439 aaPredicted RBP12.36□□□□□ -0.43
SOX2-OT-249ENST00000628810 CTSWP56202 376 aa12.36□□□□□ -0.43
SOX2-OT-249ENST00000628810 FOXO4P98177 505 aa12.36□□□□□ -0.43
SOX2-OT-249ENST00000628810 SF3B3Q15393 1217 aaKnown RBP12.36□□□□□ -0.43
SOX2-OT-249ENST00000628810 SPOCK2Q92563 424 aa12.36□□□□□ -0.43
SOX2-OT-249ENST00000628810 SUCLG2Q96I99 432 aa12.36□□□□□ -0.43
SOX2-OT-249ENST00000628810 PDZRN3Q9UPQ7 1066 aa12.36□□□□□ -0.43
SOX2-OT-249ENST00000628810 NPHP1O15259 732 aa12.35□□□□□ -0.43
SOX2-OT-249ENST00000628810 GNAI2P04899 355 aa12.35□□□□□ -0.43
SOX2-OT-249ENST00000628810 CSF1RP07333 972 aa12.35□□□□□ -0.43
SOX2-OT-249ENST00000628810 HCLS1P14317 486 aaPredicted RBP12.35□□□□□ -0.43
SOX2-OT-249ENST00000628810 PDE6BP35913 854 aa12.35□□□□□ -0.43
SOX2-OT-249ENST00000628810 MTX1Q13505 466 aa12.35□□□□□ -0.43
SOX2-OT-249ENST00000628810 RTL5Q5HYW3 569 aaPredicted RBP12.35□□□□□ -0.43
SOX2-OT-249ENST00000628810 EPHA10Q5JZY3 1008 aa12.35□□□□□ -0.43
SOX2-OT-249ENST00000628810 C3orf67Q6ZVT6 689 aa12.35□□□□□ -0.43
SOX2-OT-249ENST00000628810 ANKRD44Q8N8A2 993 aa12.35□□□□□ -0.43
SOX2-OT-249ENST00000628810 JARID2Q92833 1246 aaPredicted RBP12.35□□□□□ -0.43
SOX2-OT-249ENST00000628810 NLRP3Q96P20 1036 aa12.35□□□□□ -0.43
SOX2-OT-249ENST00000628810 CD2APQ9Y5K6 639 aa12.35□□□□□ -0.43
SOX2-OT-249ENST00000628810 LRRFIP2Q9Y608 721 aaKnown RBP12.35□□□□□ -0.43
SOX2-OT-249ENST00000628810 BRCA1P38398 1863 aaKnown RBP12.34□□□□□ -0.43
SOX2-OT-249ENST00000628810 POTEB2H3BUK9 544 aa12.34□□□□□ -0.43
SOX2-OT-249ENST00000628810 IFNLR1Q8IU57 520 aaPredicted RBP12.34□□□□□ -0.43
SOX2-OT-249ENST00000628810 CCDC24Q8N4L8 307 aa12.34□□□□□ -0.43
SOX2-OT-249ENST00000628810 TTLL11Q8NHH1 800 aa12.34□□□□□ -0.43
SOX2-OT-249ENST00000628810 BICC1Q9H694 974 aaKnown RBP12.34□□□□□ -0.43
SOX2-OT-249ENST00000628810 COL4A1P02462 1669 aa12.33□□□□□ -0.44
SOX2-OT-249ENST00000628810 SRGNP10124 158 aa12.33□□□□□ -0.44
SOX2-OT-249ENST00000628810 HOXA10P31260 410 aaPredicted RBP12.33□□□□□ -0.44
SOX2-OT-249ENST00000628810 TGFB2P61812 414 aa12.33□□□□□ -0.44
SOX2-OT-249ENST00000628810 CCDC152Q4G0S7 254 aa12.33□□□□□ -0.44
SOX2-OT-249ENST00000628810 LRRC37AA6NMS7 1700 aa12.33□□□□□ -0.44
SOX2-OT-249ENST00000628810 IER5LQ5T953 404 aa12.32□□□□□ -0.44
SOX2-OT-249ENST00000628810 CEP85Q6P2H3 762 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms