RNA–Protein interactions for RNA: ENST00000628211.2

SOX2-OT-245, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 847 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-245ENST00000628211 CCDC93Q567U6 631 aa13.54□□□□□ -0.24
SOX2-OT-245ENST00000628211 ARHGAP27Q6ZUM4 889 aa13.54□□□□□ -0.24
SOX2-OT-245ENST00000628211 PLA2G12BQ9BX93 195 aa13.54□□□□□ -0.24
SOX2-OT-245ENST00000628211 BCL2L13Q9BXK5 485 aa13.54□□□□□ -0.24
SOX2-OT-245ENST00000628211 WWC3Q9ULE0 1092 aa13.54□□□□□ -0.24
SOX2-OT-245ENST00000628211 LTBP3Q9NS15 1303 aa13.54□□□□□ -0.24
SOX2-OT-245ENST00000628211 LRRC37AA6NMS7 1700 aa13.53□□□□□ -0.24
SOX2-OT-245ENST00000628211 F6X3S4 739 aa13.53□□□□□ -0.24
SOX2-OT-245ENST00000628211 H7C1W4 665 aa13.53□□□□□ -0.24
SOX2-OT-245ENST00000628211 BBOX1O75936 387 aa13.53□□□□□ -0.24
SOX2-OT-245ENST00000628211 CCT4P50991 539 aaKnown RBP13.53□□□□□ -0.24
SOX2-OT-245ENST00000628211 GRAPQ13588 217 aa13.53□□□□□ -0.24
SOX2-OT-245ENST00000628211 SLC4A10Q6U841 1118 aa13.53□□□□□ -0.24
SOX2-OT-245ENST00000628211 RTKN2Q8IZC4 609 aa13.53□□□□□ -0.24
SOX2-OT-245ENST00000628211 GRAPLQ8TC17 118 aaPredicted RBP13.53□□□□□ -0.24
SOX2-OT-245ENST00000628211 GRM8O00222 908 aa13.52□□□□□ -0.25
SOX2-OT-245ENST00000628211 PPEF1O14829 653 aaPredicted RBP13.52□□□□□ -0.25
SOX2-OT-245ENST00000628211 UBE3BQ7Z3V4 1068 aa13.52□□□□□ -0.25
SOX2-OT-245ENST00000628211 C9orf78Q9NZ63 289 aaPredicted RBP13.52□□□□□ -0.25
SOX2-OT-245ENST00000628211 HDAC5Q9UQL6 1122 aa13.52□□□□□ -0.25
SOX2-OT-245ENST00000628211 ABCC4O15439 1325 aa13.52□□□□□ -0.25
SOX2-OT-245ENST00000628211 ZC3H4Q9UPT8 1303 aaKnown RBP13.52□□□□□ -0.25
SOX2-OT-245ENST00000628211 RTL9Q8NET4 1388 aa13.52□□□□□ -0.25
SOX2-OT-245ENST00000628211 TIAM2Q8IVF5 1701 aa13.51□□□□□ -0.25
SOX2-OT-245ENST00000628211 C21orf2O43822 256 aa13.51□□□□□ -0.25
SOX2-OT-245ENST00000628211 CTSWP56202 376 aa13.51□□□□□ -0.25
SOX2-OT-245ENST00000628211 C1QTNF8P60827 252 aa13.51□□□□□ -0.25
SOX2-OT-245ENST00000628211 RTL5Q5HYW3 569 aaPredicted RBP13.51□□□□□ -0.25
SOX2-OT-245ENST00000628211 SYNE4Q8N205 404 aa13.51□□□□□ -0.25
SOX2-OT-245ENST00000628211 TAOK3Q9H2K8 898 aa13.51□□□□□ -0.25
SOX2-OT-245ENST00000628211 NOB1Q9ULX3 412 aaKnown RBP13.51□□□□□ -0.25
SOX2-OT-245ENST00000628211 TAF1P21675 1872 aa13.5□□□□□ -0.25
SOX2-OT-245ENST00000628211 LMNB1P20700 586 aa13.5□□□□□ -0.25
SOX2-OT-245ENST00000628211 C3orf67Q6ZVT6 689 aa13.5□□□□□ -0.25
SOX2-OT-245ENST00000628211 C7orf43Q8WVR3 580 aa13.5□□□□□ -0.25
SOX2-OT-245ENST00000628211 CDC5LQ99459 802 aaKnown RBP13.5□□□□□ -0.25
SOX2-OT-245ENST00000628211 UTYO14607 1347 aa13.49□□□□□ -0.25
SOX2-OT-245ENST00000628211 SPEF2Q9C093 1822 aa13.49□□□□□ -0.25
SOX2-OT-245ENST00000628211 CASP7P55210 303 aa13.49□□□□□ -0.25
SOX2-OT-245ENST00000628211 ZKSCAN2Q63HK3 967 aa13.49□□□□□ -0.25
SOX2-OT-245ENST00000628211 SP8Q8IXZ3 490 aa13.49□□□□□ -0.25
SOX2-OT-245ENST00000628211 SUPT20HQ8NEM7 779 aa13.49□□□□□ -0.25
SOX2-OT-245ENST00000628211 PSMD1Q99460 953 aa13.49□□□□□ -0.25
SOX2-OT-245ENST00000628211 GPBP1L1Q9HC44 474 aaPredicted RBP13.49□□□□□ -0.25
SOX2-OT-245ENST00000628211 ATP6V0A2Q9Y487 856 aa13.49□□□□□ -0.25
SOX2-OT-245ENST00000628211 MS4A1P11836 297 aa13.48□□□□□ -0.25
SOX2-OT-245ENST00000628211 FKBP4Q02790 459 aaKnown RBP eCLIP13.48□□□□□ -0.25
SOX2-OT-245ENST00000628211 ATF7IPQ6VMQ6 1270 aa13.48□□□□□ -0.25
SOX2-OT-245ENST00000628211 VPS33BQ9H267 617 aa13.48□□□□□ -0.25
SOX2-OT-245ENST00000628211 NFKBIEO00221 500 aa13.47□□□□□ -0.25
SOX2-OT-245ENST00000628211 RPS8P62241 208 aaKnown RBP13.47□□□□□ -0.25
SOX2-OT-245ENST00000628211 ANKRD18AQ8IVF6 992 aa13.47□□□□□ -0.25
SOX2-OT-245ENST00000628211 TTLL11Q8NHH1 800 aa13.47□□□□□ -0.25
SOX2-OT-245ENST00000628211 ZNF219Q9P2Y4 722 aaPredicted RBP13.47□□□□□ -0.25
SOX2-OT-245ENST00000628211 SNED1Q8TER0 1413 aa13.47□□□□□ -0.25
SOX2-OT-245ENST00000628211 BCAR3O75815 825 aa13.46□□□□□ -0.25
SOX2-OT-245ENST00000628211 CSF1RP07333 972 aa13.46□□□□□ -0.25
SOX2-OT-245ENST00000628211 IGHMBP2P38935 993 aaKnown RBP13.46□□□□□ -0.25
SOX2-OT-245ENST00000628211 INTS3Q68E01 1043 aaKnown RBP13.46□□□□□ -0.25
SOX2-OT-245ENST00000628211 FRAT1Q92837 279 aaPredicted RBP13.46□□□□□ -0.25
SOX2-OT-245ENST00000628211 RNF181Q9P0P0 153 aa13.46□□□□□ -0.25
SOX2-OT-245ENST00000628211 TRIM27P14373 513 aa13.45□□□□□ -0.26
SOX2-OT-245ENST00000628211 RASSF7Q02833 373 aa13.45□□□□□ -0.26
SOX2-OT-245ENST00000628211 C9orf131Q5VYM1 1079 aa13.45□□□□□ -0.26
SOX2-OT-245ENST00000628211 FTSJ3Q8IY81 847 aaKnown RBP13.45□□□□□ -0.26
SOX2-OT-245ENST00000628211 MPNDQ8N594 471 aa13.45□□□□□ -0.26
SOX2-OT-245ENST00000628211 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.45□□□□□ -0.26
SOX2-OT-245ENST00000628211 JARID2Q92833 1246 aaPredicted RBP13.45□□□□□ -0.26
SOX2-OT-245ENST00000628211 CELF1Q92879 486 aaKnown RBP13.45□□□□□ -0.26
SOX2-OT-245ENST00000628211 LTBP1Q14766 1721 aa13.44□□□□□ -0.26
SOX2-OT-245ENST00000628211 ANKRD18BA2A2Z9 1011 aa13.44□□□□□ -0.26
SOX2-OT-245ENST00000628211 GNAI3P08754 354 aa13.44□□□□□ -0.26
SOX2-OT-245ENST00000628211 IFIT5Q13325 482 aaKnown RBP13.44□□□□□ -0.26
SOX2-OT-245ENST00000628211 DPP8Q6V1X1 898 aaPredicted RBP13.44□□□□□ -0.26
SOX2-OT-245ENST00000628211 RTFDC1Q9BY42 306 aaPredicted RBP13.44□□□□□ -0.26
SOX2-OT-245ENST00000628211 GREM2Q9H772 168 aa13.44□□□□□ -0.26
SOX2-OT-245ENST00000628211 RCAN3Q9UKA8 241 aa13.44□□□□□ -0.26
SOX2-OT-245ENST00000628211 KIF3CO14782 793 aa13.43□□□□□ -0.26
SOX2-OT-245ENST00000628211 NBPF7P0C2Y1 421 aaPredicted RBP13.43□□□□□ -0.26
SOX2-OT-245ENST00000628211 UBTFL1P0CB47 393 aaPredicted RBP13.43□□□□□ -0.26
SOX2-OT-245ENST00000628211 ITGA6P23229 1130 aa13.43□□□□□ -0.26
SOX2-OT-245ENST00000628211 IARSP41252 1262 aaKnown RBP13.43□□□□□ -0.26
SOX2-OT-245ENST00000628211 CCDC57Q2TAC2 916 aa13.43□□□□□ -0.26
SOX2-OT-245ENST00000628211 FAM161AQ3B820 660 aa13.43□□□□□ -0.26
SOX2-OT-245ENST00000628211 MPHOSPH8Q99549 860 aa13.43□□□□□ -0.26
SOX2-OT-245ENST00000628211 USP44Q9H0E7 712 aa13.43□□□□□ -0.26
SOX2-OT-245ENST00000628211 SEC31BQ9NQW1 1179 aa13.43□□□□□ -0.26
SOX2-OT-245ENST00000628211 BSDC1Q9NW68 430 aaPredicted RBP13.43□□□□□ -0.26
SOX2-OT-245ENST00000628211 CHMP3Q9Y3E7 222 aa13.43□□□□□ -0.26
SOX2-OT-245ENST00000628211 A0A1B0GUL6 1792 aa13.43□□□□□ -0.26
SOX2-OT-245ENST00000628211 FOXO4P98177 505 aa13.42□□□□□ -0.26
SOX2-OT-245ENST00000628211 RABL6Q3YEC7 729 aaPredicted RBP13.42□□□□□ -0.26
SOX2-OT-245ENST00000628211 TAF7LQ5H9L4 462 aa13.42□□□□□ -0.26
SOX2-OT-245ENST00000628211 LMBR1LQ6UX01 489 aa13.42□□□□□ -0.26
SOX2-OT-245ENST00000628211 DZIP1LQ8IYY4 767 aaKnown RBP13.42□□□□□ -0.26
SOX2-OT-245ENST00000628211 JDP2Q8WYK2 163 aa13.42□□□□□ -0.26
SOX2-OT-245ENST00000628211 CCDC85AQ96PX6 553 aaPredicted RBP13.42□□□□□ -0.26
SOX2-OT-245ENST00000628211 EYA3Q99504 573 aa13.42□□□□□ -0.26
SOX2-OT-245ENST00000628211 PODXL2Q9NZ53 605 aa13.42□□□□□ -0.26
SOX2-OT-245ENST00000628211 XDHP47989 1333 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms