RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 MYD88Q99836 296 aa15.62■□□□□ 0.09
UBR1-212ENST00000627960 IL16Q14005 1332 aa15.62■□□□□ 0.09
UBR1-212ENST00000627960 IRS4O14654 1257 aaPredicted RBP15.61■□□□□ 0.09
UBR1-212ENST00000627960 EPHX2P34913 555 aa15.61■□□□□ 0.09
UBR1-212ENST00000627960 RTL5Q5HYW3 569 aaPredicted RBP15.61■□□□□ 0.09
UBR1-212ENST00000627960 DPP8Q6V1X1 898 aaPredicted RBP15.61■□□□□ 0.09
UBR1-212ENST00000627960 TMC4Q7Z404 712 aa15.61■□□□□ 0.09
UBR1-212ENST00000627960 NIM1KQ8IY84 436 aa15.61■□□□□ 0.09
UBR1-212ENST00000627960 ZBTB38Q8NAP3 1195 aaPredicted RBP15.61■□□□□ 0.09
UBR1-212ENST00000627960 GJA3Q9Y6H8 435 aa15.61■□□□□ 0.09
UBR1-212ENST00000627960 LRRC37AA6NMS7 1700 aa15.6■□□□□ 0.09
UBR1-212ENST00000627960 ADAMTSL1Q8N6G6 1762 aa15.6■□□□□ 0.09
UBR1-212ENST00000627960 DDX58O95786 925 aaKnown RBP15.6■□□□□ 0.09
UBR1-212ENST00000627960 AOC3Q16853 763 aa15.6■□□□□ 0.09
UBR1-212ENST00000627960 CCDC191Q8NCU4 936 aa15.6■□□□□ 0.09
UBR1-212ENST00000627960 METTL22Q9BUU2 404 aaPredicted RBP15.6■□□□□ 0.09
UBR1-212ENST00000627960 CACNA1FO60840 1977 aa15.6■□□□□ 0.09
UBR1-212ENST00000627960 TWISTNBQ3B726 338 aaPredicted RBP15.59■□□□□ 0.09
UBR1-212ENST00000627960 EAPPQ56P03 285 aaPredicted RBP15.59■□□□□ 0.09
UBR1-212ENST00000627960 PNMA8AQ86V59 439 aaPredicted RBP15.59■□□□□ 0.09
UBR1-212ENST00000627960 JMYQ8N9B5 988 aa15.59■□□□□ 0.09
UBR1-212ENST00000627960 CELF1Q92879 486 aaKnown RBP15.59■□□□□ 0.09
UBR1-212ENST00000627960 CLEC11AQ9Y240 323 aa15.59■□□□□ 0.09
UBR1-212ENST00000627960 LTBP1Q14766 1721 aa15.58■□□□□ 0.08
UBR1-212ENST00000627960 PCCAP05165 728 aaPredicted RBP15.58■□□□□ 0.08
UBR1-212ENST00000627960 HSP90B1P14625 803 aaKnown RBP15.58■□□□□ 0.08
UBR1-212ENST00000627960 KIAA2012Q0VF49 1180 aa15.58■□□□□ 0.08
UBR1-212ENST00000627960 KSR2Q6VAB6 950 aa15.58■□□□□ 0.08
UBR1-212ENST00000627960 STK31Q9BXU1 1019 aa15.58■□□□□ 0.08
UBR1-212ENST00000627960 CWC25Q9NXE8 425 aaPredicted RBP15.58■□□□□ 0.08
UBR1-212ENST00000627960 ZNRF3Q9ULT6 936 aa15.58■□□□□ 0.08
UBR1-212ENST00000627960 MAP3K2Q9Y2U5 619 aa15.58■□□□□ 0.08
UBR1-212ENST00000627960 COL4A1P02462 1669 aa15.57■□□□□ 0.08
UBR1-212ENST00000627960 PI4KAP2A4QPH2 592 aa15.57■□□□□ 0.08
UBR1-212ENST00000627960 ITGBL1O95965 494 aaPredicted RBP15.57■□□□□ 0.08
UBR1-212ENST00000627960 WDR63Q8IWG1 891 aa15.57■□□□□ 0.08
UBR1-212ENST00000627960 PI4KAP1Q8N8J0 262 aa15.57■□□□□ 0.08
UBR1-212ENST00000627960 SALL2Q9Y467 1007 aaPredicted RBP15.57■□□□□ 0.08
UBR1-212ENST00000627960 PASKQ96RG2 1323 aa15.57■□□□□ 0.08
UBR1-212ENST00000627960 DUOX1Q9NRD9 1551 aa15.57■□□□□ 0.08
UBR1-212ENST00000627960 LMOD1P29536 600 aaPredicted RBP15.56■□□□□ 0.08
UBR1-212ENST00000627960 SCNN1DP51172 638 aa15.56■□□□□ 0.08
UBR1-212ENST00000627960 RPS8P62241 208 aaKnown RBP15.56■□□□□ 0.08
UBR1-212ENST00000627960 CXCL9Q07325 125 aa15.56■□□□□ 0.08
UBR1-212ENST00000627960 G2E3Q7L622 706 aa15.56■□□□□ 0.08
UBR1-212ENST00000627960 JARID2Q92833 1246 aaPredicted RBP15.56■□□□□ 0.08
UBR1-212ENST00000627960 CREBZFQ9NS37 354 aa15.56■□□□□ 0.08
UBR1-212ENST00000627960 FANCIQ9NVI1 1328 aa15.56■□□□□ 0.08
UBR1-212ENST00000627960 PDE8AO60658 829 aa15.55■□□□□ 0.08
UBR1-212ENST00000627960 SLC4A2P04920 1241 aa15.55■□□□□ 0.08
UBR1-212ENST00000627960 EPS15P42566 896 aa15.55■□□□□ 0.08
UBR1-212ENST00000627960 NSFL1CQ9UNZ2 370 aaKnown RBP15.55■□□□□ 0.08
UBR1-212ENST00000627960 CDHR2Q9BYE9 1310 aa15.54■□□□□ 0.08
UBR1-212ENST00000627960 IGKV5-2P06315 115 aa15.54■□□□□ 0.08
UBR1-212ENST00000627960 GPSM2P81274 684 aa15.54■□□□□ 0.08
UBR1-212ENST00000627960 FAM9BQ8IZU0 186 aa15.54■□□□□ 0.08
UBR1-212ENST00000627960 CNTROBQ8N137 903 aa15.54■□□□□ 0.08
UBR1-212ENST00000627960 SEC31BQ9NQW1 1179 aa15.54■□□□□ 0.08
UBR1-212ENST00000627960 MYH3P11055 1940 aa15.54■□□□□ 0.08
UBR1-212ENST00000627960 VAMP4O75379 141 aa15.53■□□□□ 0.08
UBR1-212ENST00000627960 EXOSC9Q06265 439 aaKnown RBP15.53■□□□□ 0.08
UBR1-212ENST00000627960 NEXNQ0ZGT2 675 aa15.53■□□□□ 0.08
UBR1-212ENST00000627960 TNIP1Q15025 636 aa15.53■□□□□ 0.08
UBR1-212ENST00000627960 WASHC4Q2M389 1173 aa15.53■□□□□ 0.08
UBR1-212ENST00000627960 CCDC152Q4G0S7 254 aa15.53■□□□□ 0.08
UBR1-212ENST00000627960 MAP1SQ66K74 1059 aaPredicted RBP15.53■□□□□ 0.08
UBR1-212ENST00000627960 CIAPIN1Q6FI81 312 aa15.53■□□□□ 0.08
UBR1-212ENST00000627960 USP50Q70EL3 339 aaPredicted RBP15.53■□□□□ 0.08
UBR1-212ENST00000627960 C6orf229H3BNL8 230 aa15.52■□□□□ 0.08
UBR1-212ENST00000627960 RAD17O75943 681 aa15.52■□□□□ 0.08
UBR1-212ENST00000627960 GPRC5DQ9NZD1 345 aa15.52■□□□□ 0.08
UBR1-212ENST00000627960 POLLQ9UGP5 575 aa15.52■□□□□ 0.08
UBR1-212ENST00000627960 TMEM88BA6NKF7 163 aa15.51■□□□□ 0.07
UBR1-212ENST00000627960 YDJCA8MPS7 323 aa15.51■□□□□ 0.07
UBR1-212ENST00000627960 NEURL1BA8MQ27 555 aa15.51■□□□□ 0.07
UBR1-212ENST00000627960 RIMBP2O15034 1052 aa15.51■□□□□ 0.07
UBR1-212ENST00000627960 GMPSP49915 693 aaPredicted RBP15.51■□□□□ 0.07
UBR1-212ENST00000627960 FLIIQ13045 1269 aa15.51■□□□□ 0.07
UBR1-212ENST00000627960 CWF19L2Q2TBE0 894 aaKnown RBP15.51■□□□□ 0.07
UBR1-212ENST00000627960 TBC1D16Q8TBP0 767 aa15.51■□□□□ 0.07
UBR1-212ENST00000627960 CCDC85AQ96PX6 553 aaPredicted RBP15.51■□□□□ 0.07
UBR1-212ENST00000627960 EYA3Q99504 573 aa15.51■□□□□ 0.07
UBR1-212ENST00000627960 SPINK5Q9NQ38 1064 aaPredicted RBP15.51■□□□□ 0.07
UBR1-212ENST00000627960 ADARB2Q9NS39 739 aaKnown RBP15.51■□□□□ 0.07
UBR1-212ENST00000627960 PODXL2Q9NZ53 605 aa15.51■□□□□ 0.07
UBR1-212ENST00000627960 H7C1W4 665 aa15.5■□□□□ 0.07
UBR1-212ENST00000627960 MKRN1Q9UHC7 482 aaKnown RBP15.5■□□□□ 0.07
UBR1-212ENST00000627960 TRPM7Q96QT4 1865 aa15.49■□□□□ 0.07
UBR1-212ENST00000627960 CTSWP56202 376 aa15.49■□□□□ 0.07
UBR1-212ENST00000627960 FKBP5Q13451 457 aaPredicted RBP15.49■□□□□ 0.07
UBR1-212ENST00000627960 ANKRD18AQ8IVF6 992 aa15.49■□□□□ 0.07
UBR1-212ENST00000627960 TTLL11Q8NHH1 800 aa15.49■□□□□ 0.07
UBR1-212ENST00000627960 BCL2L13Q9BXK5 485 aa15.49■□□□□ 0.07
UBR1-212ENST00000627960 DBNDD1Q9H9R9 158 aa15.49■□□□□ 0.07
UBR1-212ENST00000627960 GCKRQ14397 625 aa15.48■□□□□ 0.07
UBR1-212ENST00000627960 IFFO2Q5TF58 517 aa15.48■□□□□ 0.07
UBR1-212ENST00000627960 DNAAF4Q8WXU2 420 aa15.48■□□□□ 0.07
UBR1-212ENST00000627960 GPR101Q96P66 508 aaPredicted RBP15.48■□□□□ 0.07
UBR1-212ENST00000627960 ZC3H12CQ9C0D7 883 aaKnown RBP15.48■□□□□ 0.07
UBR1-212ENST00000627960 MYH16Q9H6N6 1097 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms