RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 ABT1Q9ULW3 272 aaKnown RBP21.56■■□□□ 1.04
TRIM29-221ENST00000627238 HCLS1P14317 486 aaPredicted RBP21.55■■□□□ 1.04
TRIM29-221ENST00000627238 AIMP1Q12904 312 aaKnown RBP21.55■■□□□ 1.04
TRIM29-221ENST00000627238 DDX46Q7L014 1031 aaKnown RBP21.55■■□□□ 1.04
TRIM29-221ENST00000627238 MPNDQ8N594 471 aa21.55■■□□□ 1.04
TRIM29-221ENST00000627238 RUNDC1Q96C34 613 aa21.55■■□□□ 1.04
TRIM29-221ENST00000627238 CST9Q5W186 159 aa21.54■■□□□ 1.04
TRIM29-221ENST00000627238 PLBD2Q8NHP8 589 aa21.54■■□□□ 1.04
TRIM29-221ENST00000627238 ECE1P42892 770 aa21.53■■□□□ 1.04
TRIM29-221ENST00000627238 KRT24Q2M2I5 525 aa21.53■■□□□ 1.04
TRIM29-221ENST00000627238 ZC3H15Q8WU90 426 aaKnown RBP21.53■■□□□ 1.04
TRIM29-221ENST00000627238 ISCA1Q9BUE6 129 aa21.53■■□□□ 1.04
TRIM29-221ENST00000627238 CHPF2Q9P2E5 772 aa21.53■■□□□ 1.04
TRIM29-221ENST00000627238 TLL2Q9Y6L7 1015 aa21.53■■□□□ 1.04
TRIM29-221ENST00000627238 TAF1P21675 1872 aa21.52■■□□□ 1.04
TRIM29-221ENST00000627238 HSPA8P11142 646 aaKnown RBP21.52■■□□□ 1.04
TRIM29-221ENST00000627238 CIAPIN1Q6FI81 312 aa21.52■■□□□ 1.04
TRIM29-221ENST00000627238 NECTIN2Q92692 538 aa21.52■■□□□ 1.04
TRIM29-221ENST00000627238 GMPSP49915 693 aaPredicted RBP21.51■■□□□ 1.03
TRIM29-221ENST00000627238 LBX1P52954 281 aa21.51■■□□□ 1.03
TRIM29-221ENST00000627238 FMR1Q06787 632 aaKnown RBP eCLIP21.51■■□□□ 1.03
TRIM29-221ENST00000627238 TRIM28Q13263 835 aaKnown RBP21.51■■□□□ 1.03
TRIM29-221ENST00000627238 TNIP1Q15025 636 aa21.51■■□□□ 1.03
TRIM29-221ENST00000627238 SF3B3Q15393 1217 aaKnown RBP21.51■■□□□ 1.03
TRIM29-221ENST00000627238 HDGFL1Q5TGJ6 251 aa21.51■■□□□ 1.03
TRIM29-221ENST00000627238 HHIPL1Q96JK4 782 aa21.51■■□□□ 1.03
TRIM29-221ENST00000627238 CAPNS2Q96L46 248 aa21.51■■□□□ 1.03
TRIM29-221ENST00000627238 DBF4Q9UBU7 674 aaPredicted RBP21.51■■□□□ 1.03
TRIM29-221ENST00000627238 TRAF5O00463 557 aa21.5■■□□□ 1.03
TRIM29-221ENST00000627238 ANKRD13DQ6ZTN6 518 aa21.5■■□□□ 1.03
TRIM29-221ENST00000627238 CCDC146Q8IYE0 955 aa21.5■■□□□ 1.03
TRIM29-221ENST00000627238 CFAP44Q96MT7 982 aa21.5■■□□□ 1.03
TRIM29-221ENST00000627238 NEUROD2Q15784 382 aa21.49■■□□□ 1.03
TRIM29-221ENST00000627238 HYPKQ9NX55 129 aa21.49■■□□□ 1.03
TRIM29-221ENST00000627238 YDJCA8MPS7 323 aa21.48■■□□□ 1.03
TRIM29-221ENST00000627238 MAP2K2P36507 400 aa21.48■■□□□ 1.03
TRIM29-221ENST00000627238 SAPCD2Q86UD0 394 aa21.48■■□□□ 1.03
TRIM29-221ENST00000627238 HIRAP54198 1017 aaPredicted RBP21.47■■□□□ 1.03
TRIM29-221ENST00000627238 WDR43Q15061 677 aaKnown RBP eCLIP21.47■■□□□ 1.03
TRIM29-221ENST00000627238 ADAMTS8Q9UP79 889 aa21.47■■□□□ 1.03
TRIM29-221ENST00000627238 RAD17O75943 681 aa21.46■■□□□ 1.03
TRIM29-221ENST00000627238 ZNF853P0CG23 659 aa21.46■■□□□ 1.03
TRIM29-221ENST00000627238 CYP4F22Q6NT55 531 aa21.46■■□□□ 1.03
TRIM29-221ENST00000627238 DPF2Q92785 391 aa21.46■■□□□ 1.03
TRIM29-221ENST00000627238 GPR101Q96P66 508 aaPredicted RBP21.46■■□□□ 1.03
TRIM29-221ENST00000627238 BCL2L13Q9BXK5 485 aa21.46■■□□□ 1.03
TRIM29-221ENST00000627238 COL4A1P02462 1669 aa21.45■■□□□ 1.02
TRIM29-221ENST00000627238 DDX10Q13206 875 aaKnown RBP21.45■■□□□ 1.02
TRIM29-221ENST00000627238 CELF1Q92879 486 aaKnown RBP21.45■■□□□ 1.02
TRIM29-221ENST00000627238 FAM89AQ96GI7 184 aa21.45■■□□□ 1.02
TRIM29-221ENST00000627238 CNOT7Q9UIV1 285 aaKnown RBP21.45■■□□□ 1.02
TRIM29-221ENST00000627238 LAS1LQ9Y4W2 734 aaKnown RBP21.45■■□□□ 1.02
TRIM29-221ENST00000627238 CELF2O95319 508 aaKnown RBP21.44■■□□□ 1.02
TRIM29-221ENST00000627238 WASHC4Q2M389 1173 aa21.44■■□□□ 1.02
TRIM29-221ENST00000627238 DUSP27Q5VZP5 1158 aa21.44■■□□□ 1.02
TRIM29-221ENST00000627238 CDC37L1Q7L3B6 337 aa21.44■■□□□ 1.02
TRIM29-221ENST00000627238 TRPM4Q8TD43 1214 aa21.44■■□□□ 1.02
TRIM29-221ENST00000627238 GLIS2Q9BZE0 524 aaPredicted RBP21.44■■□□□ 1.02
TRIM29-221ENST00000627238 MBIPQ9NS73 344 aa21.43■■□□□ 1.02
TRIM29-221ENST00000627238 ATP5J2-PTCD1G3V325 749 aa21.42■■□□□ 1.02
TRIM29-221ENST00000627238 H7C1D1 291 aa21.42■■□□□ 1.02
TRIM29-221ENST00000627238 BEGAINQ9BUH8 593 aa21.42■■□□□ 1.02
TRIM29-221ENST00000627238 IRS4O14654 1257 aaPredicted RBP21.41■■□□□ 1.02
TRIM29-221ENST00000627238 CA12O43570 354 aa21.41■■□□□ 1.02
TRIM29-221ENST00000627238 RPS12P25398 132 aaKnown RBP21.41■■□□□ 1.02
TRIM29-221ENST00000627238 PAXIP1Q6ZW49 1069 aaPredicted RBP21.41■■□□□ 1.02
TRIM29-221ENST00000627238 MICALL2Q8IY33 904 aa21.41■■□□□ 1.02
TRIM29-221ENST00000627238 ZBTB38Q8NAP3 1195 aaPredicted RBP21.41■■□□□ 1.02
TRIM29-221ENST00000627238 IFT57Q9NWB7 429 aa21.41■■□□□ 1.02
TRIM29-221ENST00000627238 PODXL2Q9NZ53 605 aa21.41■■□□□ 1.02
TRIM29-221ENST00000627238 POLLQ9UGP5 575 aa21.41■■□□□ 1.02
TRIM29-221ENST00000627238 NSFL1CQ9UNZ2 370 aaKnown RBP21.41■■□□□ 1.02
TRIM29-221ENST00000627238 ZNF609O15014 1411 aa21.4■■□□□ 1.02
TRIM29-221ENST00000627238 PSMD14O00487 310 aa21.4■■□□□ 1.02
TRIM29-221ENST00000627238 HSP90B1P14625 803 aaKnown RBP21.4■■□□□ 1.02
TRIM29-221ENST00000627238 BRPF1P55201 1214 aaPredicted RBP21.4■■□□□ 1.02
TRIM29-221ENST00000627238 GPSM2P81274 684 aa21.4■■□□□ 1.02
TRIM29-221ENST00000627238 ABHD8Q96I13 439 aa21.4■■□□□ 1.02
TRIM29-221ENST00000627238 EYA3Q99504 573 aa21.4■■□□□ 1.02
TRIM29-221ENST00000627238 SHTN1A0MZ66 631 aa21.39■■□□□ 1.01
TRIM29-221ENST00000627238 RPS8P62241 208 aaKnown RBP21.39■■□□□ 1.01
TRIM29-221ENST00000627238 PRKRIP1Q9H875 184 aaPredicted RBP21.39■■□□□ 1.01
TRIM29-221ENST00000627238 RTL9Q8NET4 1388 aa21.38■■□□□ 1.01
TRIM29-221ENST00000627238 AOC2O75106 756 aa21.38■■□□□ 1.01
TRIM29-221ENST00000627238 CALD1Q05682 793 aaKnown RBP21.38■■□□□ 1.01
TRIM29-221ENST00000627238 GOLGA2Q08379 1002 aa21.38■■□□□ 1.01
TRIM29-221ENST00000627238 TBC1D16Q8TBP0 767 aa21.38■■□□□ 1.01
TRIM29-221ENST00000627238 DBNDD1Q9H9R9 158 aa21.38■■□□□ 1.01
TRIM29-221ENST00000627238 ZBTB12Q9Y330 459 aaPredicted RBP21.38■■□□□ 1.01
TRIM29-221ENST00000627238 ECE2O60344 883 aa21.37■■□□□ 1.01
TRIM29-221ENST00000627238 GNAI1P63096 354 aa21.37■■□□□ 1.01
TRIM29-221ENST00000627238 RIC3Q7Z5B4 369 aa21.37■■□□□ 1.01
TRIM29-221ENST00000627238 CCDC191Q8NCU4 936 aa21.37■■□□□ 1.01
TRIM29-221ENST00000627238 SCN9AQ15858 1988 aa21.37■■□□□ 1.01
TRIM29-221ENST00000627238 PSME4Q14997 1843 aa21.36■■□□□ 1.01
TRIM29-221ENST00000627238 C6orf229H3BNL8 230 aa21.36■■□□□ 1.01
TRIM29-221ENST00000627238 PCCAP05165 728 aaPredicted RBP21.36■■□□□ 1.01
TRIM29-221ENST00000627238 GRM1Q13255 1194 aa21.36■■□□□ 1.01
TRIM29-221ENST00000627238 CHMP4AQ9BY43 222 aa21.36■■□□□ 1.01
TRIM29-221ENST00000627238 PHAXQ9H814 394 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms