RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 CCDC152Q4G0S7 254 aa11.68□□□□□ -0.54
NELFE-214ENST00000625905 C9orf131Q5VYM1 1079 aa11.68□□□□□ -0.54
NELFE-214ENST00000625905 C7orf43Q8WVR3 580 aa11.68□□□□□ -0.54
NELFE-214ENST00000625905 SRCIN1Q9C0H9 1055 aa11.68□□□□□ -0.54
NELFE-214ENST00000625905 SNED1Q8TER0 1413 aa11.68□□□□□ -0.54
NELFE-214ENST00000625905 SBF1O95248 1867 aa11.68□□□□□ -0.54
NELFE-214ENST00000625905 H7C1W4 665 aa11.67□□□□□ -0.54
NELFE-214ENST00000625905 GRM8O00222 908 aa11.67□□□□□ -0.54
NELFE-214ENST00000625905 BRPF1P55201 1214 aaPredicted RBP11.67□□□□□ -0.54
NELFE-214ENST00000625905 CC2D2BQ6DHV5 1058 aa11.67□□□□□ -0.54
NELFE-214ENST00000625905 OLFM4Q6UX06 510 aa11.67□□□□□ -0.54
NELFE-214ENST00000625905 TMC4Q7Z404 712 aa11.67□□□□□ -0.54
NELFE-214ENST00000625905 RTKN2Q8IZC4 609 aa11.67□□□□□ -0.54
NELFE-214ENST00000625905 CCDC85AQ96PX6 553 aaPredicted RBP11.67□□□□□ -0.54
NELFE-214ENST00000625905 API5Q9BZZ5 524 aaKnown RBP11.67□□□□□ -0.54
NELFE-214ENST00000625905 NOB1Q9ULX3 412 aaKnown RBP11.67□□□□□ -0.54
NELFE-214ENST00000625905 COL4A1P02462 1669 aa11.67□□□□□ -0.54
NELFE-214ENST00000625905 TAF1P21675 1872 aa11.67□□□□□ -0.54
NELFE-214ENST00000625905 BBOX1O75936 387 aa11.66□□□□□ -0.54
NELFE-214ENST00000625905 FKBP4Q02790 459 aaKnown RBP eCLIP11.66□□□□□ -0.54
NELFE-214ENST00000625905 GRIPAP1Q4V328 841 aa11.66□□□□□ -0.54
NELFE-214ENST00000625905 C9orf78Q9NZ63 289 aaPredicted RBP11.66□□□□□ -0.54
NELFE-214ENST00000625905 ATP6V0A2Q9Y487 856 aa11.66□□□□□ -0.54
NELFE-214ENST00000625905 RTL9Q8NET4 1388 aa11.66□□□□□ -0.54
NELFE-214ENST00000625905 SPEF2Q9C093 1822 aa11.65□□□□□ -0.54
NELFE-214ENST00000625905 ZC3H4Q9UPT8 1303 aaKnown RBP11.65□□□□□ -0.54
NELFE-214ENST00000625905 PRELPP51888 382 aa11.65□□□□□ -0.54
NELFE-214ENST00000625905 CASP7P55210 303 aa11.65□□□□□ -0.54
NELFE-214ENST00000625905 SLC51AQ86UW1 340 aa11.65□□□□□ -0.54
NELFE-214ENST00000625905 ZNF784Q8NCA9 323 aaPredicted RBP11.65□□□□□ -0.54
NELFE-214ENST00000625905 CELF1Q92879 486 aaKnown RBP11.65□□□□□ -0.54
NELFE-214ENST00000625905 CDC5LQ99459 802 aaKnown RBP11.65□□□□□ -0.54
NELFE-214ENST00000625905 PLA2G12BQ9BX93 195 aa11.65□□□□□ -0.54
NELFE-214ENST00000625905 CCDC88AQ3V6T2 1871 aa11.65□□□□□ -0.54
NELFE-214ENST00000625905 DICER1Q9UPY3 1922 aaKnown RBP11.64□□□□□ -0.55
NELFE-214ENST00000625905 DUOX1Q9NRD9 1551 aa11.64□□□□□ -0.55
NELFE-214ENST00000625905 IPO8O15397 1037 aaKnown RBP11.64□□□□□ -0.55
NELFE-214ENST00000625905 CCT4P50991 539 aaKnown RBP11.64□□□□□ -0.55
NELFE-214ENST00000625905 FAM161AQ3B820 660 aa11.64□□□□□ -0.55
NELFE-214ENST00000625905 TTLL11Q8NHH1 800 aa11.64□□□□□ -0.55
NELFE-214ENST00000625905 ZNF526Q8TF50 670 aaPredicted RBP11.64□□□□□ -0.55
NELFE-214ENST00000625905 FRAT1Q92837 279 aaPredicted RBP11.64□□□□□ -0.55
NELFE-214ENST00000625905 PSMD1Q99460 953 aa11.64□□□□□ -0.55
NELFE-214ENST00000625905 GREM2Q9H772 168 aa11.64□□□□□ -0.55
NELFE-214ENST00000625905 SEC31BQ9NQW1 1179 aa11.64□□□□□ -0.55
NELFE-214ENST00000625905 ZNF277Q9NRM2 450 aaPredicted RBP11.64□□□□□ -0.55
NELFE-214ENST00000625905 BCAR3O75815 825 aa11.63□□□□□ -0.55
NELFE-214ENST00000625905 RPS8P62241 208 aaKnown RBP11.63□□□□□ -0.55
NELFE-214ENST00000625905 DPP8Q6V1X1 898 aaPredicted RBP11.63□□□□□ -0.55
NELFE-214ENST00000625905 ANKRD18AQ8IVF6 992 aa11.63□□□□□ -0.55
NELFE-214ENST00000625905 SP8Q8IXZ3 490 aa11.63□□□□□ -0.55
NELFE-214ENST00000625905 ARHGAP45Q92619 1136 aa11.63□□□□□ -0.55
NELFE-214ENST00000625905 CHMP3Q9Y3E7 222 aa11.63□□□□□ -0.55
NELFE-214ENST00000625905 LTBP1Q14766 1721 aa11.63□□□□□ -0.55
NELFE-214ENST00000625905 UTYO14607 1347 aa11.62□□□□□ -0.55
NELFE-214ENST00000625905 TRIM27P14373 513 aa11.62□□□□□ -0.55
NELFE-214ENST00000625905 IARSP41252 1262 aaKnown RBP11.62□□□□□ -0.55
NELFE-214ENST00000625905 ATF7IPQ6VMQ6 1270 aa11.62□□□□□ -0.55
NELFE-214ENST00000625905 MPNDQ8N594 471 aa11.62□□□□□ -0.55
NELFE-214ENST00000625905 SUPT20HQ8NEM7 779 aa11.62□□□□□ -0.55
NELFE-214ENST00000625905 YTHDC1Q96MU7 727 aaKnown RBP11.62□□□□□ -0.55
NELFE-214ENST00000625905 GPBP1L1Q9HC44 474 aaPredicted RBP11.62□□□□□ -0.55
NELFE-214ENST00000625905 NBPF7P0C2Y1 421 aaPredicted RBP11.61□□□□□ -0.55
NELFE-214ENST00000625905 ITGA6P23229 1130 aa11.61□□□□□ -0.55
NELFE-214ENST00000625905 IGHMBP2P38935 993 aaKnown RBP11.61□□□□□ -0.55
NELFE-214ENST00000625905 FOXO4P98177 505 aa11.61□□□□□ -0.55
NELFE-214ENST00000625905 ZKSCAN2Q63HK3 967 aa11.61□□□□□ -0.55
NELFE-214ENST00000625905 SUCLG2Q96I99 432 aa11.61□□□□□ -0.55
NELFE-214ENST00000625905 KDM2BQ8NHM5 1336 aa11.6□□□□□ -0.55
NELFE-214ENST00000625905 COL4A5P29400 1685 aa11.6□□□□□ -0.55
NELFE-214ENST00000625905 ANKRD18BA2A2Z9 1011 aa11.6□□□□□ -0.55
NELFE-214ENST00000625905 PPIP5K2O43314 1243 aa11.6□□□□□ -0.55
NELFE-214ENST00000625905 CSF1RP07333 972 aa11.6□□□□□ -0.55
NELFE-214ENST00000625905 IFIT5Q13325 482 aaKnown RBP11.6□□□□□ -0.55
NELFE-214ENST00000625905 EPHA10Q5JZY3 1008 aa11.6□□□□□ -0.55
NELFE-214ENST00000625905 LMBR1LQ6UX01 489 aa11.6□□□□□ -0.55
NELFE-214ENST00000625905 FTSJ3Q8IY81 847 aaKnown RBP11.6□□□□□ -0.55
NELFE-214ENST00000625905 LARGE2Q8N3Y3 721 aa11.6□□□□□ -0.55
NELFE-214ENST00000625905 RTFDC1Q9BY42 306 aaPredicted RBP11.6□□□□□ -0.55
NELFE-214ENST00000625905 NSFL1CQ9UNZ2 370 aaKnown RBP11.6□□□□□ -0.55
NELFE-214ENST00000625905 UBTFL1P0CB47 393 aaPredicted RBP11.59□□□□□ -0.55
NELFE-214ENST00000625905 GPSM2P81274 684 aa11.59□□□□□ -0.55
NELFE-214ENST00000625905 AOC3Q16853 763 aa11.59□□□□□ -0.55
NELFE-214ENST00000625905 CCDC57Q2TAC2 916 aa11.59□□□□□ -0.55
NELFE-214ENST00000625905 TAF7LQ5H9L4 462 aa11.59□□□□□ -0.55
NELFE-214ENST00000625905 NIM1KQ8IY84 436 aa11.59□□□□□ -0.55
NELFE-214ENST00000625905 JDP2Q8WYK2 163 aa11.59□□□□□ -0.55
NELFE-214ENST00000625905 CLUAP1Q96AJ1 413 aa11.59□□□□□ -0.55
NELFE-214ENST00000625905 MPHOSPH8Q99549 860 aa11.59□□□□□ -0.55
NELFE-214ENST00000625905 USP44Q9H0E7 712 aa11.59□□□□□ -0.55
NELFE-214ENST00000625905 BICC1Q9H694 974 aaKnown RBP11.59□□□□□ -0.55
NELFE-214ENST00000625905 ANKIB1Q9P2G1 1089 aa11.59□□□□□ -0.55
NELFE-214ENST00000625905 XDHP47989 1333 aa11.59□□□□□ -0.55
NELFE-214ENST00000625905 UFL1O94874 794 aa11.58□□□□□ -0.56
NELFE-214ENST00000625905 INTS3Q68E01 1043 aaKnown RBP11.58□□□□□ -0.56
NELFE-214ENST00000625905 KAZALD1Q96I82 304 aa11.58□□□□□ -0.56
NELFE-214ENST00000625905 BSDC1Q9NW68 430 aaPredicted RBP11.58□□□□□ -0.56
NELFE-214ENST00000625905 GGA1Q9UJY5 639 aa11.58□□□□□ -0.56
NELFE-214ENST00000625905 RCAN3Q9UKA8 241 aa11.58□□□□□ -0.56
NELFE-214ENST00000625905 TNNQ9UQP3 1299 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms