RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 TESK2Q96S53 571 aa13.72□□□□□ -0.21
CHD2-205ENST00000625662 TRIM37O94972 964 aa13.72□□□□□ -0.21
CHD2-205ENST00000625662 BRDTQ58F21 947 aaPredicted RBP13.72□□□□□ -0.21
CHD2-205ENST00000625662 CC2D2BQ6DHV5 1058 aa13.72□□□□□ -0.21
CHD2-205ENST00000625662 SETQ01105 290 aaPredicted RBP13.71□□□□□ -0.21
CHD2-205ENST00000625662 CCDC39Q9UFE4 941 aa13.71□□□□□ -0.21
CHD2-205ENST00000625662 METP08581 1390 aa13.71□□□□□ -0.21
CHD2-205ENST00000625662 KIF22Q14807 665 aa13.71□□□□□ -0.21
CHD2-205ENST00000625662 ESR2Q92731 530 aa13.71□□□□□ -0.21
CHD2-205ENST00000625662 HMG20BQ9P0W2 317 aa13.71□□□□□ -0.21
CHD2-205ENST00000625662 RBM27Q9P2N5 1060 aaKnown RBP13.71□□□□□ -0.21
CHD2-205ENST00000625662 CCDC194A0A1B0GVG4 234 aa13.71□□□□□ -0.22
CHD2-205ENST00000625662 ANXA1P04083 346 aa13.71□□□□□ -0.22
CHD2-205ENST00000625662 VTI1AQ96AJ9 217 aa13.71□□□□□ -0.22
CHD2-205ENST00000625662 LUC7LQ9NQ29 371 aaKnown RBP13.71□□□□□ -0.22
CHD2-205ENST00000625662 ATP7BP35670 1465 aa13.71□□□□□ -0.22
CHD2-205ENST00000625662 MAGEB6P1A0A0J9YX57 407 aa13.7□□□□□ -0.22
CHD2-205ENST00000625662 SSBP05455 408 aaKnown RBP eCLIP13.7□□□□□ -0.22
CHD2-205ENST00000625662 DHX8Q14562 1220 aaKnown RBP13.7□□□□□ -0.22
CHD2-205ENST00000625662 OTUD7BQ6GQQ9 843 aa13.7□□□□□ -0.22
CHD2-205ENST00000625662 GZF1Q9H116 711 aaPredicted RBP13.7□□□□□ -0.22
CHD2-205ENST00000625662 CFAP45Q9UL16 551 aa13.7□□□□□ -0.22
CHD2-205ENST00000625662 PPIP5K2O43314 1243 aa13.7□□□□□ -0.22
CHD2-205ENST00000625662 FBLN1P23142 703 aa13.7□□□□□ -0.22
CHD2-205ENST00000625662 HIBADHP31937 336 aaKnown RBP13.7□□□□□ -0.22
CHD2-205ENST00000625662 DNAJC10Q8IXB1 793 aa13.7□□□□□ -0.22
CHD2-205ENST00000625662 ABCA9Q8IUA7 1624 aa13.7□□□□□ -0.22
CHD2-205ENST00000625662 PHKG2P15735 406 aa13.7□□□□□ -0.22
CHD2-205ENST00000625662 CHMP4BP1P59074 171 aa13.7□□□□□ -0.22
CHD2-205ENST00000625662 METTL22Q9BUU2 404 aaPredicted RBP13.7□□□□□ -0.22
CHD2-205ENST00000625662 ADGRL3Q9HAR2 1447 aa13.7□□□□□ -0.22
CHD2-205ENST00000625662 WDR33Q9C0J8 1336 aaKnown RBP13.7□□□□□ -0.22
CHD2-205ENST00000625662 KAT6BQ8WYB5 2073 aa13.7□□□□□ -0.22
CHD2-205ENST00000625662 SPATA31A3Q5VYP0 1347 aa13.69□□□□□ -0.22
CHD2-205ENST00000625662 SMC2O95347 1197 aa13.69□□□□□ -0.22
CHD2-205ENST00000625662 IL13P35225 146 aa13.69□□□□□ -0.22
CHD2-205ENST00000625662 HMGN5P82970 282 aaKnown RBP13.69□□□□□ -0.22
CHD2-205ENST00000625662 SYNMO15061 1565 aa13.69□□□□□ -0.22
CHD2-205ENST00000625662 SSRP1Q08945 709 aaKnown RBP13.69□□□□□ -0.22
CHD2-205ENST00000625662 NCOA7Q8NI08 942 aa13.69□□□□□ -0.22
CHD2-205ENST00000625662 GOLGA8AA7E2F4 631 aa13.69□□□□□ -0.22
CHD2-205ENST00000625662 GOLGA8BA8MQT2 603 aa13.69□□□□□ -0.22
CHD2-205ENST00000625662 PICALMQ13492 652 aa13.69□□□□□ -0.22
CHD2-205ENST00000625662 STXBP4Q6ZWJ1 553 aa13.69□□□□□ -0.22
CHD2-205ENST00000625662 ARID3AQ99856 593 aa13.69□□□□□ -0.22
CHD2-205ENST00000625662 PTPRTO14522 1441 aa13.69□□□□□ -0.22
CHD2-205ENST00000625662 POTEJP0CG39 1038 aa13.69□□□□□ -0.22
CHD2-205ENST00000625662 CCDC173Q0VFZ6 552 aa13.69□□□□□ -0.22
CHD2-205ENST00000625662 ZFYVE27Q5T4F4 411 aa13.69□□□□□ -0.22
CHD2-205ENST00000625662 CCDC148Q8NFR7 591 aa13.68□□□□□ -0.22
CHD2-205ENST00000625662 ZNF526Q8TF50 670 aaPredicted RBP13.68□□□□□ -0.22
CHD2-205ENST00000625662 SH2B1Q9NRF2 756 aaPredicted RBP13.68□□□□□ -0.22
CHD2-205ENST00000625662 MBD3O95983 291 aa13.68□□□□□ -0.22
CHD2-205ENST00000625662 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.68□□□□□ -0.22
CHD2-205ENST00000625662 LOC102724428A0A0B4J2F2 783 aa13.68□□□□□ -0.22
CHD2-205ENST00000625662 SIK1P57059 783 aa13.68□□□□□ -0.22
CHD2-205ENST00000625662 ARHGEF25Q86VW2 580 aa13.68□□□□□ -0.22
CHD2-205ENST00000625662 SMARCE1Q969G3 411 aa13.68□□□□□ -0.22
CHD2-205ENST00000625662 SLC5A4Q9NY91 659 aa13.68□□□□□ -0.22
CHD2-205ENST00000625662 SLC4A4Q9Y6R1 1079 aa13.68□□□□□ -0.22
CHD2-205ENST00000625662 ATP2B4P23634 1241 aa13.68□□□□□ -0.22
CHD2-205ENST00000625662 STK3Q13188 491 aa13.68□□□□□ -0.22
CHD2-205ENST00000625662 PABPC4Q13310 644 aaKnown RBP eCLIP13.68□□□□□ -0.22
CHD2-205ENST00000625662 PUM3Q15397 648 aaKnown RBP13.68□□□□□ -0.22
CHD2-205ENST00000625662 CEP57L1Q8IYX8 460 aa13.68□□□□□ -0.22
CHD2-205ENST00000625662 IVNS1ABPQ9Y6Y0 642 aa13.68□□□□□ -0.22
CHD2-205ENST00000625662 GRIPAP1Q4V328 841 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 LARP1BQ659C4 914 aaKnown RBP13.67□□□□□ -0.22
CHD2-205ENST00000625662 GOLGA6L1Q8N7Z2 621 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 RHPN1Q8TCX5 695 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 PYM1Q9BRP8 204 aaKnown RBP13.67□□□□□ -0.22
CHD2-205ENST00000625662 ZNF408Q9H9D4 720 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 SNRKQ9NRH2 765 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 NLRP5P59047 1200 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 KRT85P78386 507 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 EAPPQ56P03 285 aaPredicted RBP13.67□□□□□ -0.22
CHD2-205ENST00000625662 CCDC150Q8NCX0 1101 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 ARHGEF10LQ9HCE6 1279 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 CALM1P0DP23 149 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 CALM2P0DP24 149 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 CALM3P0DP25 149 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 DCAF15Q66K64 600 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 USP48Q86UV5 1035 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 TNPO1Q92973 898 aaKnown RBP13.67□□□□□ -0.22
CHD2-205ENST00000625662 LRRC27Q9C0I9 530 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 TET3O43151 1660 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 GCC2Q8IWJ2 1684 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 TRIM27P14373 513 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 ATP8B2P98198 1209 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 DLGAP5Q15398 846 aa13.67□□□□□ -0.22
CHD2-205ENST00000625662 ADCY10Q96PN6 1610 aa13.66□□□□□ -0.22
CHD2-205ENST00000625662 TMEM67Q5HYA8 995 aa13.66□□□□□ -0.22
CHD2-205ENST00000625662 DCPSQ96C86 337 aaKnown RBP13.66□□□□□ -0.22
CHD2-205ENST00000625662 KIF1BO60333 1816 aa13.66□□□□□ -0.22
CHD2-205ENST00000625662 WWC3Q9ULE0 1092 aa13.66□□□□□ -0.22
CHD2-205ENST00000625662 MROH5Q6ZUA9 1318 aa13.66□□□□□ -0.22
CHD2-205ENST00000625662 ERMNQ8TAM6 284 aa13.66□□□□□ -0.22
CHD2-205ENST00000625662 PARD3Q8TEW0 1356 aa13.66□□□□□ -0.22
CHD2-205ENST00000625662 UBE2Q2Q8WVN8 375 aa13.66□□□□□ -0.22
CHD2-205ENST00000625662 CSADQ9Y600 493 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms