RNA–Protein interactions for RNA: ENST00000624412.3

CU633967.1-208, humanhuman

TSL 1 (best)

Gene CU633967.1, Length 944 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CU633967.1-208ENST00000624412 GOLGB1Q14789 3259 aaKnown RBP11.33□□□□□ -0.6
CU633967.1-208ENST00000624412 MRPL50Q8N5N7 158 aaKnown RBP11.33□□□□□ -0.6
CU633967.1-208ENST00000624412 ZBTB38Q8NAP3 1195 aaPredicted RBP11.33□□□□□ -0.6
CU633967.1-208ENST00000624412 RPGRQ92834 1020 aaKnown RBP11.33□□□□□ -0.6
CU633967.1-208ENST00000624412 NLRP3Q96P20 1036 aa11.33□□□□□ -0.6
CU633967.1-208ENST00000624412 UTRNP46939 3433 aa11.33□□□□□ -0.6
CU633967.1-208ENST00000624412 PTPRCP08575 1304 aa11.33□□□□□ -0.6
CU633967.1-208ENST00000624412 NEURL1BA8MQ27 555 aa11.32□□□□□ -0.6
CU633967.1-208ENST00000624412 F6X3S4 739 aa11.32□□□□□ -0.6
CU633967.1-208ENST00000624412 PCCAP05165 728 aaPredicted RBP11.32□□□□□ -0.6
CU633967.1-208ENST00000624412 IGKV5-2P06315 115 aa11.32□□□□□ -0.6
CU633967.1-208ENST00000624412 HCLS1P14317 486 aaPredicted RBP11.32□□□□□ -0.6
CU633967.1-208ENST00000624412 HSP90B1P14625 803 aaKnown RBP11.32□□□□□ -0.6
CU633967.1-208ENST00000624412 CWF19L2Q2TBE0 894 aaKnown RBP11.32□□□□□ -0.6
CU633967.1-208ENST00000624412 SLC10A5Q5PT55 438 aa11.32□□□□□ -0.6
CU633967.1-208ENST00000624412 PRPF40BQ6NWY9 871 aaKnown RBP11.32□□□□□ -0.6
CU633967.1-208ENST00000624412 LINS1Q8NG48 757 aa11.32□□□□□ -0.6
CU633967.1-208ENST00000624412 FAM89AQ96GI7 184 aa11.32□□□□□ -0.6
CU633967.1-208ENST00000624412 IRS4O14654 1257 aaPredicted RBP11.31□□□□□ -0.6
CU633967.1-208ENST00000624412 ALDH1B1P30837 517 aa11.31□□□□□ -0.6
CU633967.1-208ENST00000624412 RTL5Q5HYW3 569 aaPredicted RBP11.31□□□□□ -0.6
CU633967.1-208ENST00000624412 C3orf67Q6ZVT6 689 aa11.31□□□□□ -0.6
CU633967.1-208ENST00000624412 SYNE4Q8N205 404 aa11.31□□□□□ -0.6
CU633967.1-208ENST00000624412 RBM17Q96I25 401 aaKnown RBP11.31□□□□□ -0.6
CU633967.1-208ENST00000624412 LRRC37AA6NMS7 1700 aa11.31□□□□□ -0.6
CU633967.1-208ENST00000624412 TIAM2Q8IVF5 1701 aa11.31□□□□□ -0.6
CU633967.1-208ENST00000624412 SBF1O95248 1867 aa11.31□□□□□ -0.6
CU633967.1-208ENST00000624412 KIF16BQ96L93 1317 aa11.31□□□□□ -0.6
CU633967.1-208ENST00000624412 CDHR2Q9BYE9 1310 aa11.31□□□□□ -0.6
CU633967.1-208ENST00000624412 TAF1P21675 1872 aa11.3□□□□□ -0.6
CU633967.1-208ENST00000624412 CCDC88AQ3V6T2 1871 aa11.3□□□□□ -0.6
CU633967.1-208ENST00000624412 RARSP54136 660 aaKnown RBP11.3□□□□□ -0.6
CU633967.1-208ENST00000624412 SOGA3Q5TF21 947 aa11.3□□□□□ -0.6
CU633967.1-208ENST00000624412 ARHGAP27Q6ZUM4 889 aa11.3□□□□□ -0.6
CU633967.1-208ENST00000624412 SPEF2Q9C093 1822 aa11.3□□□□□ -0.6
CU633967.1-208ENST00000624412 C21orf2O43822 256 aa11.29□□□□□ -0.6
CU633967.1-208ENST00000624412 HOXA10P31260 410 aaPredicted RBP11.29□□□□□ -0.6
CU633967.1-208ENST00000624412 GCKRQ14397 625 aa11.29□□□□□ -0.6
CU633967.1-208ENST00000624412 BEND3Q5T5X7 828 aa11.29□□□□□ -0.6
CU633967.1-208ENST00000624412 SLC4A10Q6U841 1118 aa11.29□□□□□ -0.6
CU633967.1-208ENST00000624412 PHF12Q96QT6 1004 aa11.29□□□□□ -0.6
CU633967.1-208ENST00000624412 CRAMP1Q96RY5 1269 aa11.29□□□□□ -0.6
CU633967.1-208ENST00000624412 ABCC4O15439 1325 aa11.29□□□□□ -0.6
CU633967.1-208ENST00000624412 DICER1Q9UPY3 1922 aaKnown RBP11.29□□□□□ -0.6
CU633967.1-208ENST00000624412 PPEF1O14829 653 aaPredicted RBP11.28□□□□□ -0.6
CU633967.1-208ENST00000624412 ALDH1L1O75891 902 aa11.28□□□□□ -0.6
CU633967.1-208ENST00000624412 YY1P25490 414 aa11.28□□□□□ -0.6
CU633967.1-208ENST00000624412 BRPF1P55201 1214 aaPredicted RBP11.28□□□□□ -0.6
CU633967.1-208ENST00000624412 CCDC93Q567U6 631 aa11.28□□□□□ -0.6
CU633967.1-208ENST00000624412 DDX46Q7L014 1031 aaKnown RBP11.28□□□□□ -0.6
CU633967.1-208ENST00000624412 UBE3BQ7Z3V4 1068 aa11.28□□□□□ -0.6
CU633967.1-208ENST00000624412 JARID2Q92833 1246 aaPredicted RBP11.28□□□□□ -0.6
CU633967.1-208ENST00000624412 SRCIN1Q9C0H9 1055 aa11.28□□□□□ -0.6
CU633967.1-208ENST00000624412 PDE8AO60658 829 aa11.27□□□□□ -0.61
CU633967.1-208ENST00000624412 CTSWP56202 376 aa11.27□□□□□ -0.61
CU633967.1-208ENST00000624412 RASSF7Q02833 373 aa11.27□□□□□ -0.61
CU633967.1-208ENST00000624412 GRAPQ13588 217 aa11.27□□□□□ -0.61
CU633967.1-208ENST00000624412 SF3B3Q15393 1217 aaKnown RBP11.27□□□□□ -0.61
CU633967.1-208ENST00000624412 CCDC152Q4G0S7 254 aa11.27□□□□□ -0.61
CU633967.1-208ENST00000624412 GRAPLQ8TC17 118 aaPredicted RBP11.27□□□□□ -0.61
CU633967.1-208ENST00000624412 API5Q9BZZ5 524 aaKnown RBP11.27□□□□□ -0.61
CU633967.1-208ENST00000624412 NOB1Q9ULX3 412 aaKnown RBP11.27□□□□□ -0.61
CU633967.1-208ENST00000624412 COL4A1P02462 1669 aa11.27□□□□□ -0.61
CU633967.1-208ENST00000624412 H7C1W4 665 aa11.26□□□□□ -0.61
CU633967.1-208ENST00000624412 NFKBIEO00221 500 aa11.26□□□□□ -0.61
CU633967.1-208ENST00000624412 GRM8O00222 908 aa11.26□□□□□ -0.61
CU633967.1-208ENST00000624412 C7orf43Q8WVR3 580 aa11.26□□□□□ -0.61
CU633967.1-208ENST00000624412 FAM212AQ96EL1 285 aa11.26□□□□□ -0.61
CU633967.1-208ENST00000624412 TMX4Q9H1E5 349 aaPredicted RBP11.26□□□□□ -0.61
CU633967.1-208ENST00000624412 TAOK3Q9H2K8 898 aa11.26□□□□□ -0.61
CU633967.1-208ENST00000624412 PLSCR2Q9NRY7 297 aa11.26□□□□□ -0.61
CU633967.1-208ENST00000624412 C9orf78Q9NZ63 289 aaPredicted RBP11.26□□□□□ -0.61
CU633967.1-208ENST00000624412 LTBP3Q9NS15 1303 aa11.26□□□□□ -0.61
CU633967.1-208ENST00000624412 SNED1Q8TER0 1413 aa11.26□□□□□ -0.61
CU633967.1-208ENST00000624412 CC2D2BQ6DHV5 1058 aa11.25□□□□□ -0.61
CU633967.1-208ENST00000624412 TMC4Q7Z404 712 aa11.25□□□□□ -0.61
CU633967.1-208ENST00000624412 RTKN2Q8IZC4 609 aa11.25□□□□□ -0.61
CU633967.1-208ENST00000624412 YTHDC1Q96MU7 727 aaKnown RBP11.25□□□□□ -0.61
CU633967.1-208ENST00000624412 PLA2G12BQ9BX93 195 aa11.25□□□□□ -0.61
CU633967.1-208ENST00000624412 RNF181Q9P0P0 153 aa11.25□□□□□ -0.61
CU633967.1-208ENST00000624412 LTBP1Q14766 1721 aa11.24□□□□□ -0.61
CU633967.1-208ENST00000624412 IPO8O15397 1037 aaKnown RBP11.24□□□□□ -0.61
CU633967.1-208ENST00000624412 BCAR3O75815 825 aa11.24□□□□□ -0.61
CU633967.1-208ENST00000624412 BBOX1O75936 387 aa11.24□□□□□ -0.61
CU633967.1-208ENST00000624412 LMNB1P20700 586 aa11.24□□□□□ -0.61
CU633967.1-208ENST00000624412 CCT4P50991 539 aaKnown RBP11.24□□□□□ -0.61
CU633967.1-208ENST00000624412 CASP7P55210 303 aa11.24□□□□□ -0.61
CU633967.1-208ENST00000624412 GRIPAP1Q4V328 841 aa11.24□□□□□ -0.61
CU633967.1-208ENST00000624412 C9orf131Q5VYM1 1079 aa11.24□□□□□ -0.61
CU633967.1-208ENST00000624412 OLFM4Q6UX06 510 aa11.24□□□□□ -0.61
CU633967.1-208ENST00000624412 ARHGAP45Q92619 1136 aa11.24□□□□□ -0.61
CU633967.1-208ENST00000624412 FRAT1Q92837 279 aaPredicted RBP11.24□□□□□ -0.61
CU633967.1-208ENST00000624412 CCDC85AQ96PX6 553 aaPredicted RBP11.24□□□□□ -0.61
CU633967.1-208ENST00000624412 ATP6V0A2Q9Y487 856 aa11.24□□□□□ -0.61
CU633967.1-208ENST00000624412 RTL9Q8NET4 1388 aa11.24□□□□□ -0.61
CU633967.1-208ENST00000624412 FKBP4Q02790 459 aaKnown RBP eCLIP11.23□□□□□ -0.61
CU633967.1-208ENST00000624412 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
CU633967.1-208ENST00000624412 CELF1Q92879 486 aaKnown RBP11.23□□□□□ -0.61
CU633967.1-208ENST00000624412 CDC5LQ99459 802 aaKnown RBP11.23□□□□□ -0.61
CU633967.1-208ENST00000624412 SEC31BQ9NQW1 1179 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms